RNA–Protein interactions for RNA: ENST00000617231.4

RAVER1-208, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAVER1, Length 3,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-208ENST00000617231 ANKRD1Q15327 319 aa13.1□□□□□ -0.31
RAVER1-208ENST00000617231 RRP12Q5JTH9 1297 aaKnown RBP13.1□□□□□ -0.31
RAVER1-208ENST00000617231 ANKRD13DQ6ZTN6 518 aa13.1□□□□□ -0.31
RAVER1-208ENST00000617231 ZSWIM6Q9HCJ5 1215 aa13.1□□□□□ -0.31
RAVER1-208ENST00000617231 RPS6KB1P23443 525 aa13.09□□□□□ -0.31
RAVER1-208ENST00000617231 SYNE3Q6ZMZ3 975 aa13.09□□□□□ -0.31
RAVER1-208ENST00000617231 LINS1Q8NG48 757 aa13.09□□□□□ -0.31
RAVER1-208ENST00000617231 HIP1O00291 1037 aa13.09□□□□□ -0.31
RAVER1-208ENST00000617231 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
RAVER1-208ENST00000617231 A0A0G2JLW4 131 aa13.09□□□□□ -0.31
RAVER1-208ENST00000617231 SKILP12757 684 aa13.09□□□□□ -0.31
RAVER1-208ENST00000617231 ST3GAL1Q11201 340 aa13.09□□□□□ -0.31
RAVER1-208ENST00000617231 CACTINQ8WUQ7 758 aaKnown RBP13.09□□□□□ -0.31
RAVER1-208ENST00000617231 IP6K1Q92551 441 aa13.09□□□□□ -0.31
RAVER1-208ENST00000617231 TTC41PQ6P2S7 1318 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 VPS72Q15906 364 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 NFXL1Q6ZNB6 911 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 ERBB3P21860 1342 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 USP27XA6NNY8 438 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 CABP4P57796 275 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 CCDC144BQ3MJ40 725 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
RAVER1-208ENST00000617231 ZNF496Q96IT1 587 aaPredicted RBP13.08□□□□□ -0.32
RAVER1-208ENST00000617231 ZBTB22O15209 634 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 EN1Q05925 392 aaPredicted RBP13.08□□□□□ -0.32
RAVER1-208ENST00000617231 DMTNQ08495 405 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.32
RAVER1-208ENST00000617231 POLA2Q14181 598 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 PTPN14Q15678 1187 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 AKAP4Q5JQC9 854 aa13.08□□□□□ -0.32
RAVER1-208ENST00000617231 PTPDC1A2A3K4 754 aa13.07□□□□□ -0.32
RAVER1-208ENST00000617231 IFIT1P09914 478 aaKnown RBP13.07□□□□□ -0.32
RAVER1-208ENST00000617231 LMOD1P29536 600 aaPredicted RBP13.07□□□□□ -0.32
RAVER1-208ENST00000617231 TMC6Q7Z403 805 aa13.07□□□□□ -0.32
RAVER1-208ENST00000617231 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
RAVER1-208ENST00000617231 GPTP24298 496 aa13.07□□□□□ -0.32
RAVER1-208ENST00000617231 NECTIN1Q15223 517 aa13.07□□□□□ -0.32
RAVER1-208ENST00000617231 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
RAVER1-208ENST00000617231 CFAP45Q9UL16 551 aa13.07□□□□□ -0.32
RAVER1-208ENST00000617231 ZSCAN25Q6NSZ9 544 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 C11orf57Q6ZUT1 292 aaPredicted RBP13.06□□□□□ -0.32
RAVER1-208ENST00000617231 SPATA31A5Q5VU36 1347 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 SPATA31A7Q8IWB4 1347 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 CAMTA1Q9Y6Y1 1673 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
RAVER1-208ENST00000617231 DDX19AQ9NUU7 478 aaKnown RBP13.06□□□□□ -0.32
RAVER1-208ENST00000617231 KCNG1Q9UIX4 513 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
RAVER1-208ENST00000617231 NRDCO43847 1150 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 ZNF75DP51815 510 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 MAP4K1Q92918 833 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 USP28Q96RU2 1077 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 WDR17Q8IZU2 1322 aa13.06□□□□□ -0.32
RAVER1-208ENST00000617231 IDH1O75874 414 aaKnown RBP13.05□□□□□ -0.32
RAVER1-208ENST00000617231 APBA3O96018 575 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 CYP21A2P08686 494 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 CEP135Q66GS9 1140 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 CNPY4Q8N129 248 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 PGBD1Q96JS3 809 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 GOLGA8FQ08AF8 430 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 NCBP1Q09161 790 aaKnown RBP13.05□□□□□ -0.32
RAVER1-208ENST00000617231 GOLGA8DPQ0D2H9 430 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 SPECC1Q5M775 1068 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 ZSWIM4Q9H7M6 989 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 ST7Q9NRC1 585 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 MTMR7Q9Y216 660 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 CCDC69A6NI79 296 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 IL2RBP14784 551 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 FUCA2Q9BTY2 467 aa13.05□□□□□ -0.32
RAVER1-208ENST00000617231 GOLGA8BA8MQT2 603 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 SERPINC1P01008 464 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 CDK11BP21127 795 aaKnown RBP13.04□□□□□ -0.32
RAVER1-208ENST00000617231 TOB2Q14106 344 aaPredicted RBP13.04□□□□□ -0.32
RAVER1-208ENST00000617231 TTC39AQ5SRH9 613 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 CEP57L1Q8IYX8 460 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 SKIDA1Q1XH10 827 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 TNNI3KQ59H18 835 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 SPTLC3Q9NUV7 552 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 ZNF215Q9UL58 517 aaPredicted RBP13.04□□□□□ -0.32
RAVER1-208ENST00000617231 FPGT-TNNI3KV9GXZ4 949 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 TAF5LO75529 589 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 IGKV5-2P06315 115 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 SCRN1Q12765 414 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 MCMDC2Q4G0Z9 681 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 C8orf76Q96K31 380 aa13.04□□□□□ -0.32
RAVER1-208ENST00000617231 DDX21Q9NR30 783 aaKnown RBP eCLIP13.04□□□□□ -0.32
RAVER1-208ENST00000617231 PES1O00541 588 aaKnown RBP13.03□□□□□ -0.32
RAVER1-208ENST00000617231 A1BGP04217 495 aa13.03□□□□□ -0.32
RAVER1-208ENST00000617231 GCKRQ14397 625 aa13.03□□□□□ -0.32
RAVER1-208ENST00000617231 ELF2Q15723 593 aa13.03□□□□□ -0.32
RAVER1-208ENST00000617231 PI16Q6UXB8 463 aa13.03□□□□□ -0.32
RAVER1-208ENST00000617231 MICU3Q86XE3 530 aa13.03□□□□□ -0.32
RAVER1-208ENST00000617231 TMEM87AQ8NBN3 555 aa13.03□□□□□ -0.32
RAVER1-208ENST00000617231 ORC3Q9UBD5 711 aaPredicted RBP13.03□□□□□ -0.32
RAVER1-208ENST00000617231 ADCY9O60503 1353 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms