RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CLEC4GQ6UXB4 293 aa9.37□□□□□ -0.91
NEK3-207ENST00000617054 MAP4K1Q92918 833 aa9.37□□□□□ -0.91
NEK3-207ENST00000617054 ABCC12Q96J65 1359 aa9.37□□□□□ -0.91
NEK3-207ENST00000617054 CCDC102BQ68D86 513 aa9.37□□□□□ -0.91
NEK3-207ENST00000617054 CHMP5Q9NZZ3 219 aa9.37□□□□□ -0.91
NEK3-207ENST00000617054 EIF5BO60841 1220 aaKnown RBP9.37□□□□□ -0.91
NEK3-207ENST00000617054 WASHC4Q2M389 1173 aa9.37□□□□□ -0.91
NEK3-207ENST00000617054 OSBP2Q969R2 916 aa9.37□□□□□ -0.91
NEK3-207ENST00000617054 COL5A3P25940 1745 aaPredicted RBP9.37□□□□□ -0.91
NEK3-207ENST00000617054 M0R2C6 588 aa9.36□□□□□ -0.91
NEK3-207ENST00000617054 SLC27A2O14975 620 aa9.36□□□□□ -0.91
NEK3-207ENST00000617054 SSFA2P28290 1259 aa9.36□□□□□ -0.91
NEK3-207ENST00000617054 DDIT3P35638 169 aa9.36□□□□□ -0.91
NEK3-207ENST00000617054 IGHMBP2P38935 993 aaKnown RBP9.36□□□□□ -0.91
NEK3-207ENST00000617054 CHRNDQ07001 517 aa9.36□□□□□ -0.91
NEK3-207ENST00000617054 MCMDC2Q4G0Z9 681 aa9.36□□□□□ -0.91
NEK3-207ENST00000617054 MYH3P11055 1940 aa9.36□□□□□ -0.91
NEK3-207ENST00000617054 CYP2E1P05181 493 aaPredicted RBP9.36□□□□□ -0.91
NEK3-207ENST00000617054 AK2P54819 239 aa9.36□□□□□ -0.91
NEK3-207ENST00000617054 FOXD4L6Q3SYB3 417 aaPredicted RBP9.36□□□□□ -0.91
NEK3-207ENST00000617054 RC3H1Q5TC82 1133 aaKnown RBP9.36□□□□□ -0.91
NEK3-207ENST00000617054 FOXD4L3Q6VB84 417 aaPredicted RBP9.36□□□□□ -0.91
NEK3-207ENST00000617054 TNPO1Q92973 898 aaKnown RBP9.36□□□□□ -0.91
NEK3-207ENST00000617054 HIP1O00291 1037 aa9.36□□□□□ -0.91
NEK3-207ENST00000617054 IDH1O75874 414 aaKnown RBP9.36□□□□□ -0.91
NEK3-207ENST00000617054 TTLL5Q6EMB2 1281 aa9.36□□□□□ -0.91
NEK3-207ENST00000617054 PUS7LQ9H0K6 701 aaKnown RBP9.36□□□□□ -0.91
NEK3-207ENST00000617054 LARGE1O95461 756 aa9.35□□□□□ -0.91
NEK3-207ENST00000617054 ANAPC15P60006 121 aa9.35□□□□□ -0.91
NEK3-207ENST00000617054 NFIXQ14938 502 aa9.35□□□□□ -0.91
NEK3-207ENST00000617054 LRRC2Q9BYS8 371 aa9.35□□□□□ -0.91
NEK3-207ENST00000617054 MED23Q9ULK4 1368 aa9.35□□□□□ -0.91
NEK3-207ENST00000617054 SBF2Q86WG5 1849 aa9.35□□□□□ -0.91
NEK3-207ENST00000617054 KLRK1P26718 216 aa9.35□□□□□ -0.91
NEK3-207ENST00000617054 GYG1P46976 350 aa9.35□□□□□ -0.91
NEK3-207ENST00000617054 PUM3Q15397 648 aaKnown RBP9.35□□□□□ -0.91
NEK3-207ENST00000617054 RUFY3Q7L099 469 aa9.35□□□□□ -0.91
NEK3-207ENST00000617054 PIH1D3Q9NQM4 214 aaKnown RBP9.35□□□□□ -0.91
NEK3-207ENST00000617054 BRWD3Q6RI45 1802 aa9.35□□□□□ -0.91
NEK3-207ENST00000617054 RNF113AO15541 343 aaKnown RBP9.34□□□□□ -0.91
NEK3-207ENST00000617054 CHST3Q7LGC8 479 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 LPIN2Q92539 896 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 JAG2Q9Y219 1238 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 SPEF2Q9C093 1822 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 ABCB7O75027 752 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 APBA3O96018 575 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 CYP21A2P08686 494 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 ZKSCAN1P17029 563 aaPredicted RBP9.34□□□□□ -0.91
NEK3-207ENST00000617054 FGFR2P21802 821 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 HAND2P61296 217 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 SLC9C2Q5TAH2 1124 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 TPTE2Q6XPS3 522 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 ANKRD18AQ8IVF6 992 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 NLRP3Q96P20 1036 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 MAST3O60307 1309 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 RASGRF1Q13972 1273 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 TXNRD1Q16881 649 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 NECAB1Q8N987 351 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 IL27Q8NEV9 243 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 TTC14Q96N46 770 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 PDRG1Q9NUG6 133 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 HMG20BQ9P0W2 317 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 MROH5Q6ZUA9 1318 aa9.34□□□□□ -0.91
NEK3-207ENST00000617054 NHSQ6T4R5 1651 aa9.33□□□□□ -0.92
NEK3-207ENST00000617054 DDX60Q8IY21 1712 aaKnown RBP9.33□□□□□ -0.92
NEK3-207ENST00000617054 HSPD1P10809 573 aaKnown RBP9.33□□□□□ -0.92
NEK3-207ENST00000617054 ZMYM1Q5SVZ6 1142 aa9.33□□□□□ -0.92
NEK3-207ENST00000617054 GZF1Q9H116 711 aaPredicted RBP9.33□□□□□ -0.92
NEK3-207ENST00000617054 WWC3Q9ULE0 1092 aa9.33□□□□□ -0.92
NEK3-207ENST00000617054 MINPP1Q9UNW1 487 aa9.33□□□□□ -0.92
NEK3-207ENST00000617054 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
NEK3-207ENST00000617054 RBM6P78332 1123 aaKnown RBP9.33□□□□□ -0.92
NEK3-207ENST00000617054 STK3Q13188 491 aa9.33□□□□□ -0.92
NEK3-207ENST00000617054 TFCP2L1Q9NZI6 479 aa9.33□□□□□ -0.92
NEK3-207ENST00000617054 RREB1Q92766 1687 aa9.33□□□□□ -0.92
NEK3-207ENST00000617054 STK25O00506 426 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 SLC5A1P13866 664 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 HS6ST3Q8IZP7 471 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 GPR101Q96P66 508 aaPredicted RBP9.32□□□□□ -0.92
NEK3-207ENST00000617054 CDC5LQ99459 802 aaKnown RBP9.32□□□□□ -0.92
NEK3-207ENST00000617054 CYP46A1Q9Y6A2 500 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 MYO5AQ9Y4I1 1855 aaKnown RBP9.32□□□□□ -0.92
NEK3-207ENST00000617054 GYS1P13807 737 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 STOX1Q6ZVD7 989 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 STK11IPQ8N1F8 1099 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 SPATA5Q8NB90 893 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 ZSWIM6Q9HCJ5 1215 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 FOXP2O15409 715 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 MCM4P33991 863 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 RPS8P62241 208 aaKnown RBP9.32□□□□□ -0.92
NEK3-207ENST00000617054 RAB3GAP1Q15042 981 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 SF3B3Q15393 1217 aaKnown RBP9.32□□□□□ -0.92
NEK3-207ENST00000617054 ZNF827Q17R98 1081 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 TXNRD3Q86VQ6 643 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 CCDC83Q8IWF9 413 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 ABCF2Q9UG63 623 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 ZDHHC9Q9Y397 364 aa9.32□□□□□ -0.92
NEK3-207ENST00000617054 ZNF532Q9HCE3 1301 aa9.31□□□□□ -0.92
NEK3-207ENST00000617054 RXRBP28702 533 aa9.31□□□□□ -0.92
NEK3-207ENST00000617054 TM4SF1P30408 202 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms