RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.65□□□□□ -0.06
TULP4-206ENST00000616856 SYCE3A1L190 88 aa14.65□□□□□ -0.06
TULP4-206ENST00000616856 GADD45BO75293 160 aaPredicted RBP14.65□□□□□ -0.06
TULP4-206ENST00000616856 CCDC83Q8IWF9 413 aa14.65□□□□□ -0.06
TULP4-206ENST00000616856 MAP4K1Q92918 833 aa14.65□□□□□ -0.06
TULP4-206ENST00000616856 ZSCAN31Q96LW9 406 aaPredicted RBP14.65□□□□□ -0.06
TULP4-206ENST00000616856 TCEANC2Q96MN5 208 aa14.65□□□□□ -0.06
TULP4-206ENST00000616856 ZSWIM6Q9HCJ5 1215 aa14.65□□□□□ -0.06
TULP4-206ENST00000616856 MED23Q9ULK4 1368 aa14.64□□□□□ -0.07
TULP4-206ENST00000616856 ZKSCAN1P17029 563 aaPredicted RBP14.64□□□□□ -0.07
TULP4-206ENST00000616856 IL15P40933 162 aaPredicted RBP14.64□□□□□ -0.07
TULP4-206ENST00000616856 VPS53Q5VIR6 699 aa14.64□□□□□ -0.07
TULP4-206ENST00000616856 DBNDD2Q9BQY9 259 aa14.64□□□□□ -0.07
TULP4-206ENST00000616856 PDRG1Q9NUG6 133 aa14.64□□□□□ -0.07
TULP4-206ENST00000616856 ANKRD18BA2A2Z9 1011 aa14.64□□□□□ -0.07
TULP4-206ENST00000616856 SYT1P21579 422 aa14.64□□□□□ -0.07
TULP4-206ENST00000616856 HS1BP3Q53T59 392 aa14.64□□□□□ -0.07
TULP4-206ENST00000616856 SETDB2Q96T68 719 aa14.64□□□□□ -0.07
TULP4-206ENST00000616856 ATP6V1DQ9Y5K8 247 aa14.64□□□□□ -0.07
TULP4-206ENST00000616856 SLC27A2O14975 620 aa14.63□□□□□ -0.07
TULP4-206ENST00000616856 GTF2E1P29083 439 aaPredicted RBP14.63□□□□□ -0.07
TULP4-206ENST00000616856 ERFEQ4G0M1 354 aa14.63□□□□□ -0.07
TULP4-206ENST00000616856 SH2B1Q9NRF2 756 aaPredicted RBP14.63□□□□□ -0.07
TULP4-206ENST00000616856 SNRKQ9NRH2 765 aa14.63□□□□□ -0.07
TULP4-206ENST00000616856 DDX60Q8IY21 1712 aaKnown RBP14.63□□□□□ -0.07
TULP4-206ENST00000616856 CIAO1O76071 339 aa14.63□□□□□ -0.07
TULP4-206ENST00000616856 KCNJ4P48050 445 aa14.63□□□□□ -0.07
TULP4-206ENST00000616856 ME3Q16798 604 aa14.63□□□□□ -0.07
TULP4-206ENST00000616856 NECAB1Q8N987 351 aa14.63□□□□□ -0.07
TULP4-206ENST00000616856 CYP46A1Q9Y6A2 500 aa14.63□□□□□ -0.07
TULP4-206ENST00000616856 UBR3Q6ZT12 1888 aa14.63□□□□□ -0.07
TULP4-206ENST00000616856 PDIA4P13667 645 aaKnown RBP14.62□□□□□ -0.07
TULP4-206ENST00000616856 LDHAL6AQ6ZMR3 332 aa14.62□□□□□ -0.07
TULP4-206ENST00000616856 USP48Q86UV5 1035 aa14.62□□□□□ -0.07
TULP4-206ENST00000616856 TMEM87AQ8NBN3 555 aa14.62□□□□□ -0.07
TULP4-206ENST00000616856 NEUROD6Q96NK8 337 aa14.62□□□□□ -0.07
TULP4-206ENST00000616856 SMC3Q9UQE7 1217 aa14.62□□□□□ -0.07
TULP4-206ENST00000616856 ZSCAN22P10073 491 aaPredicted RBP14.61□□□□□ -0.07
TULP4-206ENST00000616856 SLFNL1Q499Z3 407 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 TPRNQ4KMQ1 711 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 CCDC129Q6ZRS4 1044 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 ZSCAN30Q86W11 494 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 SEC62Q99442 399 aaKnown RBP14.61□□□□□ -0.07
TULP4-206ENST00000616856 DNAJC2Q99543 621 aaKnown RBP14.61□□□□□ -0.07
TULP4-206ENST00000616856 TPCN1Q9ULQ1 816 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 CNPY2Q9Y2B0 182 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 PLSCR1O15162 318 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 RGL2O15211 777 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 STX6O43752 255 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 ATP5JP18859 108 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 PSMA5P28066 241 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 TIMM10P62072 90 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 NBPF5PQ86XG9 351 aaPredicted RBP14.61□□□□□ -0.07
TULP4-206ENST00000616856 CCDC24Q8N4L8 307 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 SEC31BQ9NQW1 1179 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 CNNM1Q9NRU3 951 aa14.61□□□□□ -0.07
TULP4-206ENST00000616856 ADRA2BP18089 450 aa14.6□□□□□ -0.07
TULP4-206ENST00000616856 GJB2P29033 226 aa14.6□□□□□ -0.07
TULP4-206ENST00000616856 PDLIM2Q96JY6 352 aa14.6□□□□□ -0.07
TULP4-206ENST00000616856 CEP126Q9P2H0 1117 aa14.6□□□□□ -0.07
TULP4-206ENST00000616856 ZNF609O15014 1411 aa14.6□□□□□ -0.07
TULP4-206ENST00000616856 HSP90B1P14625 803 aaKnown RBP14.6□□□□□ -0.07
TULP4-206ENST00000616856 CCDC152Q4G0S7 254 aa14.6□□□□□ -0.07
TULP4-206ENST00000616856 RNF20Q5VTR2 975 aa14.6□□□□□ -0.07
TULP4-206ENST00000616856 DDX46Q7L014 1031 aaKnown RBP14.6□□□□□ -0.07
TULP4-206ENST00000616856 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
TULP4-206ENST00000616856 LAMB2P55268 1798 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 ABCC12Q96J65 1359 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 NPHP1O15259 732 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 TAF5LO75529 589 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 C3orf67Q6ZVT6 689 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 NYXQ9GZU5 481 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 FBXO3Q9UK99 471 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 A0A1B0GUL7 405 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 ZNF827Q17R98 1081 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 CSPP1Q1MSJ5 1256 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 METTL24Q5JXM2 366 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 TFCP2L1Q9NZI6 479 aa14.59□□□□□ -0.07
TULP4-206ENST00000616856 COL24A1Q17RW2 1714 aa14.58□□□□□ -0.07
TULP4-206ENST00000616856 TNS1Q9HBL0 1735 aaKnown RBP14.58□□□□□ -0.07
TULP4-206ENST00000616856 F13A1P00488 732 aa14.58□□□□□ -0.08
TULP4-206ENST00000616856 NFIXQ14938 502 aa14.58□□□□□ -0.08
TULP4-206ENST00000616856 TSPY26PQ9H489 355 aa14.58□□□□□ -0.08
TULP4-206ENST00000616856 RIPOR2Q9Y4F9 1068 aa14.58□□□□□ -0.08
TULP4-206ENST00000616856 RIC1Q4ADV7 1423 aa14.58□□□□□ -0.08
TULP4-206ENST00000616856 LETM1O95202 739 aaPredicted RBP14.58□□□□□ -0.08
TULP4-206ENST00000616856 MSNP26038 577 aaKnown RBP14.58□□□□□ -0.08
TULP4-206ENST00000616856 ANKRD1Q15327 319 aa14.58□□□□□ -0.08
TULP4-206ENST00000616856 TPTE2Q6XPS3 522 aa14.58□□□□□ -0.08
TULP4-206ENST00000616856 GPR108Q9NPR9 543 aa14.58□□□□□ -0.08
TULP4-206ENST00000616856 MTMR6Q9Y217 621 aa14.58□□□□□ -0.08
TULP4-206ENST00000616856 GYS1P13807 737 aa14.57□□□□□ -0.08
TULP4-206ENST00000616856 TOB2Q14106 344 aaPredicted RBP14.57□□□□□ -0.08
TULP4-206ENST00000616856 RNF214Q8ND24 703 aa14.57□□□□□ -0.08
TULP4-206ENST00000616856 MPHOSPH8Q99549 860 aa14.57□□□□□ -0.08
TULP4-206ENST00000616856 HAUS7Q99871 368 aa14.57□□□□□ -0.08
TULP4-206ENST00000616856 FIBPO43427 364 aa14.57□□□□□ -0.08
TULP4-206ENST00000616856 HMG20BQ9P0W2 317 aa14.57□□□□□ -0.08
TULP4-206ENST00000616856 CARMIL3Q8ND23 1372 aa14.56□□□□□ -0.08
TULP4-206ENST00000616856 RPS6KB1P23443 525 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms