RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 TRPM4Q8TD43 1214 aa21.37■■□□□ 1.01
LHX1-202ENST00000616237 CLUAP1Q96AJ1 413 aa21.37■■□□□ 1.01
LHX1-202ENST00000616237 PASKQ96RG2 1323 aa21.37■■□□□ 1.01
LHX1-202ENST00000616237 PLIN1O60240 522 aa21.36■■□□□ 1.01
LHX1-202ENST00000616237 KCNJ4P48050 445 aa21.36■■□□□ 1.01
LHX1-202ENST00000616237 MICALL2Q8IY33 904 aa21.36■■□□□ 1.01
LHX1-202ENST00000616237 COA1Q9GZY4 146 aa21.36■■□□□ 1.01
LHX1-202ENST00000616237 LRRFIP2Q9Y608 721 aaKnown RBP21.36■■□□□ 1.01
LHX1-202ENST00000616237 PSME4Q14997 1843 aa21.36■■□□□ 1.01
LHX1-202ENST00000616237 EGFRP00533 1210 aa21.36■■□□□ 1.01
LHX1-202ENST00000616237 ZKSCAN2Q63HK3 967 aa21.36■■□□□ 1.01
LHX1-202ENST00000616237 C15orf52Q6ZUT6 534 aaKnown RBP21.36■■□□□ 1.01
LHX1-202ENST00000616237 CNTROBQ8N137 903 aa21.36■■□□□ 1.01
LHX1-202ENST00000616237 DNAJC5GQ8N7S2 189 aa21.36■■□□□ 1.01
LHX1-202ENST00000616237 RPS12P25398 132 aaKnown RBP21.35■■□□□ 1.01
LHX1-202ENST00000616237 RSBN1LQ6PCB5 846 aaPredicted RBP21.35■■□□□ 1.01
LHX1-202ENST00000616237 SAMD7Q7Z3H4 446 aa21.35■■□□□ 1.01
LHX1-202ENST00000616237 GMLQ99445 158 aa21.35■■□□□ 1.01
LHX1-202ENST00000616237 ZNF646O15015 1829 aaPredicted RBP21.35■■□□□ 1.01
LHX1-202ENST00000616237 ZNF609O15014 1411 aa21.34■■□□□ 1.01
LHX1-202ENST00000616237 USP17L3A6NCW0 530 aa21.34■■□□□ 1.01
LHX1-202ENST00000616237 USP17L4A6NCW7 530 aa21.34■■□□□ 1.01
LHX1-202ENST00000616237 H7C1D1 291 aa21.34■■□□□ 1.01
LHX1-202ENST00000616237 PTPN12Q05209 780 aaKnown RBP21.34■■□□□ 1.01
LHX1-202ENST00000616237 USP17L1Q7RTZ2 530 aa21.34■■□□□ 1.01
LHX1-202ENST00000616237 TMEM57Q8N5G2 664 aa21.34■■□□□ 1.01
LHX1-202ENST00000616237 MXD3Q9BW11 206 aa21.34■■□□□ 1.01
LHX1-202ENST00000616237 CD209Q9NNX6 404 aa21.34■■□□□ 1.01
LHX1-202ENST00000616237 DACT2Q5SW24 774 aa21.33■■□□□ 1
LHX1-202ENST00000616237 PGAP2Q9UHJ9 254 aa21.33■■□□□ 1
LHX1-202ENST00000616237 FMR1Q06787 632 aaKnown RBP eCLIP21.32■■□□□ 1
LHX1-202ENST00000616237 TBC1D10BQ4KMP7 808 aaPredicted RBP21.32■■□□□ 1
LHX1-202ENST00000616237 VGLL2Q8N8G2 317 aa21.32■■□□□ 1
LHX1-202ENST00000616237 AGBL3Q8NEM8 1001 aa21.32■■□□□ 1
LHX1-202ENST00000616237 MROH5Q6ZUA9 1318 aa21.32■■□□□ 1
LHX1-202ENST00000616237 RLBP1P12271 317 aa21.31■■□□□ 1
LHX1-202ENST00000616237 UBE4AQ14139 1066 aa21.31■■□□□ 1
LHX1-202ENST00000616237 STRIP1Q5VSL9 837 aa21.31■■□□□ 1
LHX1-202ENST00000616237 ZNF280AP59817 542 aaPredicted RBP21.3■■□□□ 1
LHX1-202ENST00000616237 EYA2O00167 538 aa21.29■■□□□ 1
LHX1-202ENST00000616237 GNAI3P08754 354 aa21.29■■□□□ 1
LHX1-202ENST00000616237 METTL24Q5JXM2 366 aa21.29■■□□□ 1
LHX1-202ENST00000616237 RBM26Q5T8P6 1007 aaKnown RBP21.29■■□□□ 1
LHX1-202ENST00000616237 TTLL5Q6EMB2 1281 aa21.29■■□□□ 1
LHX1-202ENST00000616237 ATG9AQ7Z3C6 839 aa21.29■■□□□ 1
LHX1-202ENST00000616237 TRAF5O00463 557 aa21.28■■□□□ 1
LHX1-202ENST00000616237 PDE8BO95263 885 aa21.28■■□□□ 1
LHX1-202ENST00000616237 IL1R1P14778 569 aa21.28■■□□□ 1
LHX1-202ENST00000616237 GTF2IP78347 998 aa21.28■■□□□ 1
LHX1-202ENST00000616237 ZC3H15Q8WU90 426 aaKnown RBP21.28■■□□□ 1
LHX1-202ENST00000616237 FBXW7Q969H0 707 aa21.28■■□□□ 1
LHX1-202ENST00000616237 GYG1P46976 350 aa21.27■■□□□ 1
LHX1-202ENST00000616237 DZIP1LQ8IYY4 767 aaKnown RBP21.27■■□□□ 1
LHX1-202ENST00000616237 FAM84BQ96KN1 310 aaPredicted RBP21.27■■□□□ 1
LHX1-202ENST00000616237 PA2G4Q9UQ80 394 aaKnown RBP21.27■■□□□ 1
LHX1-202ENST00000616237 HDAC5Q9UQL6 1122 aa21.27■■□□□ 1
LHX1-202ENST00000616237 ASTN2O75129 1339 aaPredicted RBP21.26■□□□□ 0.99
LHX1-202ENST00000616237 USP17L8P0C7I0 530 aa21.26■□□□□ 0.99
LHX1-202ENST00000616237 MTX1Q13505 466 aa21.26■□□□□ 0.99
LHX1-202ENST00000616237 KIF4BQ2VIQ3 1234 aa21.26■□□□□ 0.99
LHX1-202ENST00000616237 ZNF804AQ7Z570 1209 aa21.26■□□□□ 0.99
LHX1-202ENST00000616237 GLIS2Q9BZE0 524 aaPredicted RBP21.26■□□□□ 0.99
LHX1-202ENST00000616237 SIL1Q9H173 461 aa21.26■□□□□ 0.99
LHX1-202ENST00000616237 CREBZFQ9NS37 354 aa21.26■□□□□ 0.99
LHX1-202ENST00000616237 FGFR2P21802 821 aa21.25■□□□□ 0.99
LHX1-202ENST00000616237 CERS5Q8N5B7 392 aa21.25■□□□□ 0.99
LHX1-202ENST00000616237 KLRG1Q96E93 195 aa21.25■□□□□ 0.99
LHX1-202ENST00000616237 COPRSQ9NQ92 184 aa21.25■□□□□ 0.99
LHX1-202ENST00000616237 GNAI2P04899 355 aa21.24■□□□□ 0.99
LHX1-202ENST00000616237 DLK2Q6UY11 383 aa21.24■□□□□ 0.99
LHX1-202ENST00000616237 FTSJ3Q8IY81 847 aaKnown RBP21.24■□□□□ 0.99
LHX1-202ENST00000616237 TDRD7Q8NHU6 1098 aaKnown RBP21.24■□□□□ 0.99
LHX1-202ENST00000616237 MYOZ2Q9NPC6 264 aa21.24■□□□□ 0.99
LHX1-202ENST00000616237 JAG2Q9Y219 1238 aa21.24■□□□□ 0.99
LHX1-202ENST00000616237 MYO3BQ8WXR4 1341 aa21.24■□□□□ 0.99
LHX1-202ENST00000616237 TMEM88BA6NKF7 163 aa21.23■□□□□ 0.99
LHX1-202ENST00000616237 CIAO1O76071 339 aa21.23■□□□□ 0.99
LHX1-202ENST00000616237 HIBADHP31937 336 aaKnown RBP21.23■□□□□ 0.99
LHX1-202ENST00000616237 FBXO33Q7Z6M2 555 aa21.23■□□□□ 0.99
LHX1-202ENST00000616237 FBXO3Q9UK99 471 aa21.23■□□□□ 0.99
LHX1-202ENST00000616237 ZBTB7BO15156 539 aaPredicted RBP21.23■□□□□ 0.99
LHX1-202ENST00000616237 SRGAP3O43295 1099 aa21.23■□□□□ 0.99
LHX1-202ENST00000616237 CST9Q5W186 159 aa21.23■□□□□ 0.99
LHX1-202ENST00000616237 KIAA0825Q8IV33 1275 aa21.23■□□□□ 0.99
LHX1-202ENST00000616237 PANK1Q8TE04 598 aa21.23■□□□□ 0.99
LHX1-202ENST00000616237 PNMA6EA0A0J9YXQ4 647 aa21.22■□□□□ 0.99
LHX1-202ENST00000616237 SASH1O94885 1247 aa21.22■□□□□ 0.99
LHX1-202ENST00000616237 SCARF1Q14162 830 aa21.22■□□□□ 0.99
LHX1-202ENST00000616237 PUM3Q15397 648 aaKnown RBP21.22■□□□□ 0.99
LHX1-202ENST00000616237 CDC37L1Q7L3B6 337 aa21.22■□□□□ 0.99
LHX1-202ENST00000616237 USP48Q86UV5 1035 aa21.22■□□□□ 0.99
LHX1-202ENST00000616237 ITPRIPQ8IWB1 547 aa21.22■□□□□ 0.99
LHX1-202ENST00000616237 RCAN3Q9UKA8 241 aa21.22■□□□□ 0.99
LHX1-202ENST00000616237 FAM205AQ6ZU69 1335 aa21.21■□□□□ 0.99
LHX1-202ENST00000616237 POLR2AP24928 1970 aaKnown RBP21.21■□□□□ 0.99
LHX1-202ENST00000616237 C1orf115Q9H7X2 142 aa21.21■□□□□ 0.99
LHX1-202ENST00000616237 GGA3Q9NZ52 723 aa21.21■□□□□ 0.99
LHX1-202ENST00000616237 IL15P40933 162 aaPredicted RBP21.2■□□□□ 0.98
LHX1-202ENST00000616237 BCAMP50895 628 aa21.2■□□□□ 0.98
LHX1-202ENST00000616237 NBPF9Q3BBW0 867 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms