RNA–Protein interactions for RNA: ENST00000616230.1

PCDHGC3-203, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-203ENST00000616230 CST9Q5W186 159 aa15.5■□□□□ 0.07
PCDHGC3-203ENST00000616230 DIEXFQ68CQ4 756 aaKnown RBP15.5■□□□□ 0.07
PCDHGC3-203ENST00000616230 USP17L1Q7RTZ2 530 aa15.5■□□□□ 0.07
PCDHGC3-203ENST00000616230 GLIS2Q9BZE0 524 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-203ENST00000616230 COA1Q9GZY4 146 aa15.5■□□□□ 0.07
PCDHGC3-203ENST00000616230 SMC4Q9NTJ3 1288 aa15.5■□□□□ 0.07
PCDHGC3-203ENST00000616230 KLRK1P26718 216 aa15.49■□□□□ 0.07
PCDHGC3-203ENST00000616230 ZNF280AP59817 542 aaPredicted RBP15.49■□□□□ 0.07
PCDHGC3-203ENST00000616230 KIF4BQ2VIQ3 1234 aa15.49■□□□□ 0.07
PCDHGC3-203ENST00000616230 MIER1Q8N108 512 aa15.49■□□□□ 0.07
PCDHGC3-203ENST00000616230 ZNF594Q96JF6 807 aaPredicted RBP15.49■□□□□ 0.07
PCDHGC3-203ENST00000616230 GMLQ99445 158 aa15.49■□□□□ 0.07
PCDHGC3-203ENST00000616230 THSD7BQ9C0I4 1608 aa15.49■□□□□ 0.07
PCDHGC3-203ENST00000616230 IRS2Q9Y4H2 1338 aa15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 TAF5LO75529 589 aa15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 KCNJ4P48050 445 aa15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 VEGFBP49765 207 aa15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 BRPF1P55201 1214 aaPredicted RBP15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 DEFB115Q30KQ5 88 aa15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 TAF7LQ5H9L4 462 aa15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 LDHAL6AQ6ZMR3 332 aa15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 CDC37L1Q7L3B6 337 aa15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 BICC1Q9H694 974 aaKnown RBP15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 ABT1Q9ULW3 272 aaKnown RBP15.48■□□□□ 0.07
PCDHGC3-203ENST00000616230 SNAP23O00161 211 aa15.47■□□□□ 0.07
PCDHGC3-203ENST00000616230 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
PCDHGC3-203ENST00000616230 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
PCDHGC3-203ENST00000616230 RABL6Q3YEC7 729 aaPredicted RBP15.47■□□□□ 0.07
PCDHGC3-203ENST00000616230 DACT2Q5SW24 774 aa15.47■□□□□ 0.07
PCDHGC3-203ENST00000616230 RBM26Q5T8P6 1007 aaKnown RBP15.47■□□□□ 0.07
PCDHGC3-203ENST00000616230 STRIP1Q5VSL9 837 aa15.47■□□□□ 0.07
PCDHGC3-203ENST00000616230 C15orf52Q6ZUT6 534 aaKnown RBP15.47■□□□□ 0.07
PCDHGC3-203ENST00000616230 HELBQ8NG08 1087 aaPredicted RBP15.47■□□□□ 0.07
PCDHGC3-203ENST00000616230 USP44Q9H0E7 712 aa15.47■□□□□ 0.07
PCDHGC3-203ENST00000616230 CELF2O95319 508 aaKnown RBP15.46■□□□□ 0.07
PCDHGC3-203ENST00000616230 USP17L8P0C7I0 530 aa15.46■□□□□ 0.07
PCDHGC3-203ENST00000616230 ANKRD44Q8N8A2 993 aa15.46■□□□□ 0.07
PCDHGC3-203ENST00000616230 CNNM1Q9NRU3 951 aa15.46■□□□□ 0.07
PCDHGC3-203ENST00000616230 TLL2Q9Y6L7 1015 aa15.46■□□□□ 0.07
PCDHGC3-203ENST00000616230 MYO3BQ8WXR4 1341 aa15.45■□□□□ 0.06
PCDHGC3-203ENST00000616230 RARSP54136 660 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-203ENST00000616230 TTLL5Q6EMB2 1281 aa15.45■□□□□ 0.06
PCDHGC3-203ENST00000616230 USP48Q86UV5 1035 aa15.45■□□□□ 0.06
PCDHGC3-203ENST00000616230 DCPSQ96C86 337 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-203ENST00000616230 MXD3Q9BW11 206 aa15.45■□□□□ 0.06
PCDHGC3-203ENST00000616230 CD209Q9NNX6 404 aa15.45■□□□□ 0.06
PCDHGC3-203ENST00000616230 MYOZ2Q9NPC6 264 aa15.45■□□□□ 0.06
PCDHGC3-203ENST00000616230 GGA3Q9NZ52 723 aa15.45■□□□□ 0.06
PCDHGC3-203ENST00000616230 NOB1Q9ULX3 412 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-203ENST00000616230 WDR33Q9C0J8 1336 aaKnown RBP15.44■□□□□ 0.06
PCDHGC3-203ENST00000616230 KRT26Q7Z3Y9 468 aa15.44■□□□□ 0.06
PCDHGC3-203ENST00000616230 FBXW7Q969H0 707 aa15.44■□□□□ 0.06
PCDHGC3-203ENST00000616230 ASTN2O75129 1339 aaPredicted RBP15.43■□□□□ 0.06
PCDHGC3-203ENST00000616230 ARAP2Q8WZ64 1704 aa15.43■□□□□ 0.06
PCDHGC3-203ENST00000616230 ECM29Q5VYK3 1845 aa15.43■□□□□ 0.06
PCDHGC3-203ENST00000616230 ADM5C9JUS6 153 aa15.43■□□□□ 0.06
PCDHGC3-203ENST00000616230 PLIN1O60240 522 aa15.43■□□□□ 0.06
PCDHGC3-203ENST00000616230 DLK2Q6UY11 383 aa15.43■□□□□ 0.06
PCDHGC3-203ENST00000616230 SAPCD2Q86UD0 394 aa15.43■□□□□ 0.06
PCDHGC3-203ENST00000616230 PUS3Q9BZE2 481 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-203ENST00000616230 ZNF408Q9H9D4 720 aa15.43■□□□□ 0.06
PCDHGC3-203ENST00000616230 RIPOR2Q9Y4F9 1068 aa15.43■□□□□ 0.06
PCDHGC3-203ENST00000616230 IL1R1P14778 569 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 MMP14P50281 582 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 GTF2IP78347 998 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 UBE4AQ14139 1066 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 SCARF1Q14162 830 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 ANGEL2Q5VTE6 544 aaKnown RBP15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 CYP4F22Q6NT55 531 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 ZNF804AQ7Z570 1209 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 HHIPL1Q96JK4 782 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 API5Q9BZZ5 524 aaKnown RBP15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 MROH5Q6ZUA9 1318 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 KIF16BQ96L93 1317 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 PITPNM2Q9BZ72 1349 aa15.42■□□□□ 0.06
PCDHGC3-203ENST00000616230 ECE1P42892 770 aa15.41■□□□□ 0.06
PCDHGC3-203ENST00000616230 SULF1Q8IWU6 871 aa15.41■□□□□ 0.06
PCDHGC3-203ENST00000616230 OGFOD1Q8N543 542 aa15.41■□□□□ 0.06
PCDHGC3-203ENST00000616230 CAPNS2Q96L46 248 aa15.41■□□□□ 0.06
PCDHGC3-203ENST00000616230 HNRNPUQ00839 825 aaKnown RBP eCLIP15.4■□□□□ 0.06
PCDHGC3-203ENST00000616230 LRRC24Q50LG9 513 aa15.4■□□□□ 0.06
PCDHGC3-203ENST00000616230 PAXIP1Q6ZW49 1069 aaPredicted RBP15.4■□□□□ 0.06
PCDHGC3-203ENST00000616230 KIAA0825Q8IV33 1275 aa15.4■□□□□ 0.06
PCDHGC3-203ENST00000616230 ARHGAP45Q92619 1136 aa15.4■□□□□ 0.06
PCDHGC3-203ENST00000616230 WNT10BO00744 389 aa15.39■□□□□ 0.05
PCDHGC3-203ENST00000616230 RFX5P48382 616 aaPredicted RBP15.39■□□□□ 0.05
PCDHGC3-203ENST00000616230 FKBP1AP62942 108 aaKnown RBP15.39■□□□□ 0.05
PCDHGC3-203ENST00000616230 NBPF9Q3BBW0 867 aa15.39■□□□□ 0.05
PCDHGC3-203ENST00000616230 COL13A1Q5TAT6 717 aaPredicted RBP15.39■□□□□ 0.05
PCDHGC3-203ENST00000616230 CERS5Q8N5B7 392 aa15.39■□□□□ 0.05
PCDHGC3-203ENST00000616230 VGLL2Q8N8G2 317 aa15.39■□□□□ 0.05
PCDHGC3-203ENST00000616230 KLHDC4Q8TBB5 520 aa15.39■□□□□ 0.05
PCDHGC3-203ENST00000616230 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
PCDHGC3-203ENST00000616230 HDAC9Q9UKV0 1011 aa15.39■□□□□ 0.05
PCDHGC3-203ENST00000616230 FOXN1O15353 648 aa15.38■□□□□ 0.05
PCDHGC3-203ENST00000616230 UBTFL1P0CB47 393 aaPredicted RBP15.38■□□□□ 0.05
PCDHGC3-203ENST00000616230 METTL24Q5JXM2 366 aa15.38■□□□□ 0.05
PCDHGC3-203ENST00000616230 IFFO2Q5TF58 517 aa15.38■□□□□ 0.05
PCDHGC3-203ENST00000616230 GBA2Q9HCG7 927 aaPredicted RBP15.38■□□□□ 0.05
PCDHGC3-203ENST00000616230 MYH13Q9UKX3 1938 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms