RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 FBXO18Q8NFZ0 1043 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 PIBF1Q8WXW3 757 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 WASF1Q92558 559 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 HAUS7Q99871 368 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 LLPHQ9BRT6 129 aaKnown RBP6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 PCDH11XQ9BZA7 1347 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 PCDH11YQ9BZA8 1340 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 RXRAP19793 462 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 ADD1P35611 737 aaKnown RBP6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 ZAP70P43403 619 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 AMOTL1Q8IY63 956 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 CTCFLQ8NI51 663 aaPredicted RBP6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 KIF18AQ8NI77 898 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 ERCC4Q92889 916 aaPredicted RBP6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 KAZALD1Q96I82 304 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 ZNF500O60304 480 aaPredicted RBP6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 NEMFO60524 1076 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 FGAP02671 866 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 SYKP43405 635 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 MFSD6Q6ZSS7 791 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 FAM177A1Q8N128 213 aaPredicted RBP6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 PDCL2Q8N4E4 241 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 PPP1R1BQ9UD71 204 aaPredicted RBP6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 ANGEL1Q9UNK9 670 aaKnown RBP6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 DIP2CQ9Y2E4 1556 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 ERVV-2B6SEH9 535 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 PI16Q6UXB8 463 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 DZIP3Q86Y13 1208 aaKnown RBP6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 CNNM3Q8NE01 707 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 BTG4Q9NY30 223 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 FBXO3Q9UK99 471 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 KIDINS220Q9ULH0 1771 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 SMTNL1A8MU46 457 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 MYSM1Q5VVJ2 828 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 KLHL10Q6JEL2 608 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 SLC26A6Q9BXS9 759 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 CEMIPQ8WUJ3 1361 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 E7EWF7 191 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 ITGA6P23229 1130 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 CDC5LQ99459 802 aaKnown RBP6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 DSCC1Q9BVC3 393 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 DHX8Q14562 1220 aaKnown RBP6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 DDB1Q16531 1140 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 ANKARQ7Z5J8 1434 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 ASAP1Q9ULH1 1129 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 SPHKAPQ2M3C7 1700 aa6.53□□□□□ -1.36
SYNCRIP-204ENST00000616122 H7C1W4 665 aa6.52□□□□□ -1.36
SYNCRIP-204ENST00000616122 KIF2AO00139 706 aaPredicted RBP6.52□□□□□ -1.36
SYNCRIP-204ENST00000616122 TULP1O00294 542 aaPredicted RBP6.52□□□□□ -1.36
SYNCRIP-204ENST00000616122 ATL3Q6DD88 541 aa6.52□□□□□ -1.36
SYNCRIP-204ENST00000616122 UBXN4Q92575 508 aa6.52□□□□□ -1.36
SYNCRIP-204ENST00000616122 COL3A1P02461 1466 aaPredicted RBP6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 NBPF26B4DH59 902 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 CAVIN4Q5BKX8 364 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 NBPF14Q5TI25 921 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 NBPF10Q6P3W6 841 aaKnown RBP6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 NBPF15Q8N660 670 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 CLSTN2Q9H4D0 955 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 GPR108Q9NPR9 543 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 GPHNQ9NQX3 736 aaPredicted RBP6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 NIP7Q9Y221 180 aaKnown RBP eCLIP6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZNF652Q9Y2D9 606 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 TSC1Q92574 1164 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 AGLP35573 1532 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 AOPEPQ8N6M6 819 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 FRMPD1Q5SYB0 1578 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 B4E1Z4 1266 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 PFKFB2O60825 505 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 TERF1P54274 439 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 WTAPQ15007 396 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 HSP90AA4PQ58FG1 418 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 BRAPQ7Z569 592 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 OSBP2Q969R2 916 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 CBX8Q9HC52 389 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 RCOR1Q9UKL0 485 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZBTB1Q9Y2K1 713 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 WDR17Q8IZU2 1322 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 PRDM1O75626 825 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 PCCAP05165 728 aaPredicted RBP6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 GSDMDP57764 484 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZMYM1Q5SVZ6 1142 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 ESR2Q92731 530 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 TAF6LQ9Y6J9 622 aa6.52□□□□□ -1.37
SYNCRIP-204ENST00000616122 NCOA3Q9Y6Q9 1424 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 ELP1O95163 1332 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 YEATS4O95619 227 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 CHGBP05060 677 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 CYP7A1P22680 504 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 FILIP1LQ4L180 1135 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 TMTC2Q8N394 836 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 CCDC47Q96A33 483 aaKnown RBP6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 TMX4Q9H1E5 349 aaPredicted RBP6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 KIF1BO60333 1816 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 MAST3O60307 1309 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 G3V3G9 751 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 MBD4O95243 580 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 TXLNAP40222 546 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 LRMPQ12912 555 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 DCAF8Q5TAQ9 597 aa6.51□□□□□ -1.37
SYNCRIP-204ENST00000616122 DIS3L2Q8IYB7 885 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms