RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MAP3K5Q99683 1374 aa15.27■□□□□ 0.04
MSH6-214ENST00000616033 SLC3A2P08195 630 aaKnown RBP15.27■□□□□ 0.04
MSH6-214ENST00000616033 SART3Q15020 963 aaKnown RBP15.27■□□□□ 0.04
MSH6-214ENST00000616033 ZNF530Q6P9A1 599 aaPredicted RBP15.27■□□□□ 0.04
MSH6-214ENST00000616033 DRC1Q96MC2 740 aa15.27■□□□□ 0.04
MSH6-214ENST00000616033 GSDMDP57764 484 aa15.27■□□□□ 0.04
MSH6-214ENST00000616033 CNPY4Q8N129 248 aa15.27■□□□□ 0.04
MSH6-214ENST00000616033 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.03
MSH6-214ENST00000616033 EPB41L2O43491 1005 aaKnown RBP15.27■□□□□ 0.03
MSH6-214ENST00000616033 EIF4A1P60842 406 aaKnown RBP15.27■□□□□ 0.03
MSH6-214ENST00000616033 TPM4P67936 248 aa15.27■□□□□ 0.03
MSH6-214ENST00000616033 ERC1Q8IUD2 1116 aa15.27■□□□□ 0.03
MSH6-214ENST00000616033 MRPS27Q92552 414 aaKnown RBP15.27■□□□□ 0.03
MSH6-214ENST00000616033 ZNF396Q96N95 335 aaPredicted RBP15.27■□□□□ 0.03
MSH6-214ENST00000616033 ZSCAN16Q9H4T2 348 aaPredicted RBP15.27■□□□□ 0.03
MSH6-214ENST00000616033 HIP1O00291 1037 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 RBM43Q6ZSC3 357 aaKnown RBP15.26■□□□□ 0.03
MSH6-214ENST00000616033 DPF2Q92785 391 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 DESI2Q9BSY9 194 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 RXRAP19793 462 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 UBASH3AP57075 661 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 SLC39A6Q13433 755 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 E2F4Q16254 413 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 SPECC1Q5M775 1068 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 IL17RAQ96F46 866 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 FEZ2Q9UHY8 353 aaPredicted RBP15.26■□□□□ 0.03
MSH6-214ENST00000616033 SPATA31D1Q6ZQQ2 1576 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 ATP5J2-PTCD1G3V325 749 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 GOLIM4O00461 696 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 CTAGE5O15320 804 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
MSH6-214ENST00000616033 ATP2B1P20020 1258 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 CDC25BP30305 580 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 CYP2C19P33261 490 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 CPLX3Q8WVH0 158 aa15.26■□□□□ 0.03
MSH6-214ENST00000616033 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
MSH6-214ENST00000616033 PUF60Q9UHX1 559 aaKnown RBP15.26■□□□□ 0.03
MSH6-214ENST00000616033 TMEM232C9JQI7 657 aa15.25■□□□□ 0.03
MSH6-214ENST00000616033 IBSPP21815 317 aaPredicted RBP15.25■□□□□ 0.03
MSH6-214ENST00000616033 FANCCQ00597 558 aa15.25■□□□□ 0.03
MSH6-214ENST00000616033 TFCP2Q12800 502 aa15.25■□□□□ 0.03
MSH6-214ENST00000616033 SYNE3Q6ZMZ3 975 aa15.25■□□□□ 0.03
MSH6-214ENST00000616033 NSUN7Q8NE18 718 aaKnown RBP15.25■□□□□ 0.03
MSH6-214ENST00000616033 DBNDD2Q9BQY9 259 aa15.25■□□□□ 0.03
MSH6-214ENST00000616033 ADAMTS13Q76LX8 1427 aa15.25■□□□□ 0.03
MSH6-214ENST00000616033 PTPRUQ92729 1446 aa15.25■□□□□ 0.03
MSH6-214ENST00000616033 SARM1Q6SZW1 724 aa15.25■□□□□ 0.03
MSH6-214ENST00000616033 STOX1Q6ZVD7 989 aa15.25■□□□□ 0.03
MSH6-214ENST00000616033 FLT4P35916 1363 aa15.25■□□□□ 0.03
MSH6-214ENST00000616033 GRM8O00222 908 aa15.24■□□□□ 0.03
MSH6-214ENST00000616033 HOXC9P31274 260 aa15.24■□□□□ 0.03
MSH6-214ENST00000616033 ETF1P62495 437 aaKnown RBP15.24■□□□□ 0.03
MSH6-214ENST00000616033 PLEKHA4Q9H4M7 779 aa15.24■□□□□ 0.03
MSH6-214ENST00000616033 LCMT1Q9UIC8 334 aa15.24■□□□□ 0.03
MSH6-214ENST00000616033 KCNG1Q9UIX4 513 aa15.24■□□□□ 0.03
MSH6-214ENST00000616033 WWC2Q6AWC2 1192 aa15.24■□□□□ 0.03
MSH6-214ENST00000616033 IRX2Q9BZI1 471 aaPredicted RBP15.24■□□□□ 0.03
MSH6-214ENST00000616033 SNRKQ9NRH2 765 aa15.24■□□□□ 0.03
MSH6-214ENST00000616033 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.24■□□□□ 0.03
MSH6-214ENST00000616033 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
MSH6-214ENST00000616033 ADKP55263 362 aaKnown RBP15.24■□□□□ 0.03
MSH6-214ENST00000616033 SMC1AQ14683 1233 aaKnown RBP15.24■□□□□ 0.03
MSH6-214ENST00000616033 MYD88Q99836 296 aa15.24■□□□□ 0.03
MSH6-214ENST00000616033 KIAA1468Q9P260 1216 aa15.24■□□□□ 0.03
MSH6-214ENST00000616033 CEP170BQ9Y4F5 1589 aaPredicted RBP15.23■□□□□ 0.03
MSH6-214ENST00000616033 CPLX1O14810 134 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 H2AFXP16104 143 aaPredicted RBP15.23■□□□□ 0.03
MSH6-214ENST00000616033 ADD1P35611 737 aaKnown RBP15.23■□□□□ 0.03
MSH6-214ENST00000616033 EPHA10Q5JZY3 1008 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 ANKLE2Q86XL3 938 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 DBF4Q9UBU7 674 aaPredicted RBP15.23■□□□□ 0.03
MSH6-214ENST00000616033 RCOR1Q9UKL0 485 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 KIF2AO00139 706 aaPredicted RBP15.23■□□□□ 0.03
MSH6-214ENST00000616033 SASH3O75995 380 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 CTDNEP1O95476 244 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 TOP1P11387 765 aaKnown RBP15.23■□□□□ 0.03
MSH6-214ENST00000616033 ADCY9O60503 1353 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 CAVIN2O95810 425 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 PSME1Q06323 249 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 ZSCAN26Q16670 478 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 CCDC85AQ96PX6 553 aaPredicted RBP15.23■□□□□ 0.03
MSH6-214ENST00000616033 LZTFL1Q9NQ48 299 aa15.23■□□□□ 0.03
MSH6-214ENST00000616033 ZNF202O95125 648 aa15.22■□□□□ 0.03
MSH6-214ENST00000616033 DBNLQ9UJU6 430 aaKnown RBP15.22■□□□□ 0.03
MSH6-214ENST00000616033 TBX22Q9Y458 520 aa15.22■□□□□ 0.03
MSH6-214ENST00000616033 IGSF1Q8N6C5 1336 aa15.22■□□□□ 0.03
MSH6-214ENST00000616033 CASQ1P31415 396 aa15.22■□□□□ 0.03
MSH6-214ENST00000616033 GPS2Q13227 327 aa15.22■□□□□ 0.03
MSH6-214ENST00000616033 KRT32Q14532 448 aa15.22■□□□□ 0.03
MSH6-214ENST00000616033 CCDC150Q8NCX0 1101 aa15.22■□□□□ 0.03
MSH6-214ENST00000616033 C8orf76Q96K31 380 aa15.22■□□□□ 0.03
MSH6-214ENST00000616033 TFRCP02786 760 aaKnown RBP15.21■□□□□ 0.03
MSH6-214ENST00000616033 TIMM10P62072 90 aa15.21■□□□□ 0.03
MSH6-214ENST00000616033 PNOCQ13519 176 aa15.21■□□□□ 0.03
MSH6-214ENST00000616033 UBE3BQ7Z3V4 1068 aa15.21■□□□□ 0.03
MSH6-214ENST00000616033 WDR24Q96S15 920 aa15.21■□□□□ 0.03
MSH6-214ENST00000616033 VPS18Q9P253 973 aa15.21■□□□□ 0.03
MSH6-214ENST00000616033 MTX1Q13505 466 aa15.21■□□□□ 0.03
MSH6-214ENST00000616033 NBPF6Q5VWK0 638 aa15.21■□□□□ 0.03
MSH6-214ENST00000616033 NBPF4Q96M43 638 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms