RNA–Protein interactions for RNA: ENST00000615951.4

CDK11B-206, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-206ENST00000615951 CPA1P15085 419 aa22.3■■□□□ 1.16
CDK11B-206ENST00000615951 BLOC1S2Q6QNY1 142 aa22.3■■□□□ 1.16
CDK11B-206ENST00000615951 SECISBP2LQ93073 1101 aaKnown RBP22.3■■□□□ 1.16
CDK11B-206ENST00000615951 ITGA6P23229 1130 aa22.3■■□□□ 1.16
CDK11B-206ENST00000615951 RPS6KB1P23443 525 aa22.3■■□□□ 1.16
CDK11B-206ENST00000615951 ATP6V1AP38606 617 aa22.3■■□□□ 1.16
CDK11B-206ENST00000615951 CRKLP46109 303 aaKnown RBP22.3■■□□□ 1.16
CDK11B-206ENST00000615951 MYRIPQ8NFW9 859 aa22.3■■□□□ 1.16
CDK11B-206ENST00000615951 XAGE2Q96GT9 111 aa22.3■■□□□ 1.16
CDK11B-206ENST00000615951 TBC1D2BQ9UPU7 963 aa22.3■■□□□ 1.16
CDK11B-206ENST00000615951 DDX49Q9Y6V7 483 aaKnown RBP22.3■■□□□ 1.16
CDK11B-206ENST00000615951 UBN2Q6ZU65 1347 aa22.29■■□□□ 1.16
CDK11B-206ENST00000615951 ATP2B3Q16720 1220 aa22.29■■□□□ 1.16
CDK11B-206ENST00000615951 DSCC1Q9BVC3 393 aa22.29■■□□□ 1.16
CDK11B-206ENST00000615951 PIP4K2BP78356 416 aa22.29■■□□□ 1.16
CDK11B-206ENST00000615951 SYNE4Q8N205 404 aa22.29■■□□□ 1.16
CDK11B-206ENST00000615951 ACSBG1Q96GR2 724 aa22.29■■□□□ 1.16
CDK11B-206ENST00000615951 GREM2Q9H772 168 aa22.29■■□□□ 1.16
CDK11B-206ENST00000615951 CCDC9Q9Y3X0 531 aaKnown RBP22.29■■□□□ 1.16
CDK11B-206ENST00000615951 RNF113AO15541 343 aaKnown RBP22.28■■□□□ 1.16
CDK11B-206ENST00000615951 IRX3P78415 501 aaPredicted RBP22.28■■□□□ 1.16
CDK11B-206ENST00000615951 TTC39AQ5SRH9 613 aa22.28■■□□□ 1.16
CDK11B-206ENST00000615951 PDLIM2Q96JY6 352 aa22.28■■□□□ 1.16
CDK11B-206ENST00000615951 SMC3Q9UQE7 1217 aa22.28■■□□□ 1.16
CDK11B-206ENST00000615951 COL5A3P25940 1745 aaPredicted RBP22.28■■□□□ 1.16
CDK11B-206ENST00000615951 PARP10Q53GL7 1025 aa22.27■■□□□ 1.16
CDK11B-206ENST00000615951 GORABQ5T7V8 394 aa22.27■■□□□ 1.16
CDK11B-206ENST00000615951 ZNF512BQ96KM6 892 aaPredicted RBP22.27■■□□□ 1.16
CDK11B-206ENST00000615951 ZFYP08048 801 aaPredicted RBP22.27■■□□□ 1.16
CDK11B-206ENST00000615951 VPS72Q15906 364 aa22.27■■□□□ 1.16
CDK11B-206ENST00000615951 LDHAL6AQ6ZMR3 332 aa22.27■■□□□ 1.16
CDK11B-206ENST00000615951 ZNF710Q8N1W2 664 aa22.27■■□□□ 1.16
CDK11B-206ENST00000615951 IRX5P78411 483 aaPredicted RBP22.26■■□□□ 1.15
CDK11B-206ENST00000615951 ITPK1Q13572 414 aa22.26■■□□□ 1.15
CDK11B-206ENST00000615951 METTL24Q5JXM2 366 aa22.26■■□□□ 1.15
CDK11B-206ENST00000615951 SEC62Q99442 399 aaKnown RBP22.26■■□□□ 1.15
CDK11B-206ENST00000615951 CAMTA2O94983 1202 aa22.26■■□□□ 1.15
CDK11B-206ENST00000615951 LARGE1O95461 756 aa22.26■■□□□ 1.15
CDK11B-206ENST00000615951 ADORA1P30542 326 aa22.26■■□□□ 1.15
CDK11B-206ENST00000615951 RGS22Q8NE09 1264 aa22.26■■□□□ 1.15
CDK11B-206ENST00000615951 CCDC85AQ96PX6 553 aaPredicted RBP22.26■■□□□ 1.15
CDK11B-206ENST00000615951 LAMB2P55268 1798 aa22.25■■□□□ 1.15
CDK11B-206ENST00000615951 HSP90B1P14625 803 aaKnown RBP22.25■■□□□ 1.15
CDK11B-206ENST00000615951 CCDC129Q6ZRS4 1044 aa22.25■■□□□ 1.15
CDK11B-206ENST00000615951 VGLL2Q8N8G2 317 aa22.25■■□□□ 1.15
CDK11B-206ENST00000615951 BCL9LQ86UU0 1499 aa22.24■■□□□ 1.15
CDK11B-206ENST00000615951 BCORQ6W2J9 1755 aa22.24■■□□□ 1.15
CDK11B-206ENST00000615951 ME3Q16798 604 aa22.24■■□□□ 1.15
CDK11B-206ENST00000615951 CNNM1Q9NRU3 951 aa22.24■■□□□ 1.15
CDK11B-206ENST00000615951 PRPF40AO75400 957 aaKnown RBP22.23■■□□□ 1.15
CDK11B-206ENST00000615951 CCDC83Q8IWF9 413 aa22.23■■□□□ 1.15
CDK11B-206ENST00000615951 NEK1Q96PY6 1258 aa22.23■■□□□ 1.15
CDK11B-206ENST00000615951 UTP14AQ9BVJ6 771 aaKnown RBP22.23■■□□□ 1.15
CDK11B-206ENST00000615951 TPCN1Q9ULQ1 816 aa22.23■■□□□ 1.15
CDK11B-206ENST00000615951 ARAP2Q8WZ64 1704 aa22.23■■□□□ 1.15
CDK11B-206ENST00000615951 MYH14Q7Z406 1995 aaKnown RBP22.23■■□□□ 1.15
CDK11B-206ENST00000615951 HMGB1P09429 215 aaKnown RBP22.23■■□□□ 1.15
CDK11B-206ENST00000615951 ZSCAN22P10073 491 aaPredicted RBP22.23■■□□□ 1.15
CDK11B-206ENST00000615951 TAF6LQ9Y6J9 622 aa22.23■■□□□ 1.15
CDK11B-206ENST00000615951 RTL9Q8NET4 1388 aa22.23■■□□□ 1.15
CDK11B-206ENST00000615951 RGL2O15211 777 aa22.22■■□□□ 1.15
CDK11B-206ENST00000615951 STX6O43752 255 aa22.22■■□□□ 1.15
CDK11B-206ENST00000615951 MBD3O95983 291 aa22.22■■□□□ 1.15
CDK11B-206ENST00000615951 CHGBP05060 677 aa22.22■■□□□ 1.15
CDK11B-206ENST00000615951 SUSD4Q5VX71 490 aa22.22■■□□□ 1.15
CDK11B-206ENST00000615951 LARP6Q9BRS8 491 aaKnown RBP22.22■■□□□ 1.15
CDK11B-206ENST00000615951 MAST3O60307 1309 aa22.22■■□□□ 1.15
CDK11B-206ENST00000615951 CYP21A2P08686 494 aa22.22■■□□□ 1.15
CDK11B-206ENST00000615951 GTF2F1P35269 517 aaKnown RBP eCLIP22.22■■□□□ 1.15
CDK11B-206ENST00000615951 ST3GAL1Q11201 340 aa22.22■■□□□ 1.15
CDK11B-206ENST00000615951 TOB2Q14106 344 aaPredicted RBP22.22■■□□□ 1.15
CDK11B-206ENST00000615951 MROH5Q6ZUA9 1318 aa22.22■■□□□ 1.15
CDK11B-206ENST00000615951 PDE8BO95263 885 aa22.21■■□□□ 1.15
CDK11B-206ENST00000615951 SYT1P21579 422 aa22.21■■□□□ 1.15
CDK11B-206ENST00000615951 DDX60Q8IY21 1712 aaKnown RBP22.21■■□□□ 1.15
CDK11B-206ENST00000615951 A0A0G2JS52 829 aa22.21■■□□□ 1.15
CDK11B-206ENST00000615951 FKBP4Q02790 459 aaKnown RBP eCLIP22.21■■□□□ 1.15
CDK11B-206ENST00000615951 FOXD4L5Q5VV16 416 aaPredicted RBP22.21■■□□□ 1.15
CDK11B-206ENST00000615951 FOXD4L4Q8WXT5 416 aaPredicted RBP22.21■■□□□ 1.15
CDK11B-206ENST00000615951 UBAP1LF5GYI3 381 aa22.2■■□□□ 1.14
CDK11B-206ENST00000615951 GJB2P29033 226 aa22.2■■□□□ 1.14
CDK11B-206ENST00000615951 ZNF445P59923 1031 aa22.2■■□□□ 1.14
CDK11B-206ENST00000615951 FNBP4Q8N3X1 1017 aaPredicted RBP22.2■■□□□ 1.14
CDK11B-206ENST00000615951 ATP6V1DQ9Y5K8 247 aa22.2■■□□□ 1.14
CDK11B-206ENST00000615951 MYH7P12883 1935 aa22.2■■□□□ 1.14
CDK11B-206ENST00000615951 HSPD1P10809 573 aaKnown RBP22.19■■□□□ 1.14
CDK11B-206ENST00000615951 TMEM87AQ8NBN3 555 aa22.19■■□□□ 1.14
CDK11B-206ENST00000615951 PRIMPOLQ96LW4 560 aa22.19■■□□□ 1.14
CDK11B-206ENST00000615951 ZNF652Q9Y2D9 606 aa22.19■■□□□ 1.14
CDK11B-206ENST00000615951 AKAP11Q9UKA4 1901 aa22.19■■□□□ 1.14
CDK11B-206ENST00000615951 FAM98CQ17RN3 349 aaKnown RBP22.19■■□□□ 1.14
CDK11B-206ENST00000615951 CLEC4GQ6UXB4 293 aa22.19■■□□□ 1.14
CDK11B-206ENST00000615951 ZAP70P43403 619 aa22.18■■□□□ 1.14
CDK11B-206ENST00000615951 SCARF1Q14162 830 aa22.18■■□□□ 1.14
CDK11B-206ENST00000615951 GPT2Q8TD30 523 aa22.18■■□□□ 1.14
CDK11B-206ENST00000615951 NGLY1Q96IV0 654 aa22.18■■□□□ 1.14
CDK11B-206ENST00000615951 NTSR2O95665 410 aa22.18■■□□□ 1.14
CDK11B-206ENST00000615951 UQCRFS1P1P0C7P4 283 aa22.18■■□□□ 1.14
CDK11B-206ENST00000615951 FGFR2P21802 821 aa22.18■■□□□ 1.14
CDK11B-206ENST00000615951 TTF1Q15361 905 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms