RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 TSR1Q2NL82 804 aaKnown RBP16.32■□□□□ 0.2
SSBP2-220ENST00000615665 SEC62Q99442 399 aaKnown RBP16.32■□□□□ 0.2
SSBP2-220ENST00000615665 CLEC17AQ6ZS10 378 aa16.32■□□□□ 0.2
SSBP2-220ENST00000615665 CCDC47Q96A33 483 aaKnown RBP16.32■□□□□ 0.2
SSBP2-220ENST00000615665 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
SSBP2-220ENST00000615665 LLPHQ9BRT6 129 aaKnown RBP16.32■□□□□ 0.2
SSBP2-220ENST00000615665 CCDC152Q4G0S7 254 aa16.32■□□□□ 0.2
SSBP2-220ENST00000615665 TTC12Q9H892 705 aaPredicted RBP16.32■□□□□ 0.2
SSBP2-220ENST00000615665 JAK2O60674 1132 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 TAF5LO75529 589 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 HELBQ8NG08 1087 aaPredicted RBP16.31■□□□□ 0.2
SSBP2-220ENST00000615665 DNAJC25Q9H1X3 360 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 DACH1Q9UI36 760 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 ITGA6P23229 1130 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
SSBP2-220ENST00000615665 MEX3CQ5U5Q3 659 aaKnown RBP16.31■□□□□ 0.2
SSBP2-220ENST00000615665 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 OFD1O75665 1012 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 MRPS27Q92552 414 aaKnown RBP16.31■□□□□ 0.2
SSBP2-220ENST00000615665 DSCC1Q9BVC3 393 aa16.31■□□□□ 0.2
SSBP2-220ENST00000615665 ZBTB43O43298 467 aa16.3■□□□□ 0.2
SSBP2-220ENST00000615665 CBFA2T2O43439 604 aa16.3■□□□□ 0.2
SSBP2-220ENST00000615665 APPBP2Q92624 585 aa16.3■□□□□ 0.2
SSBP2-220ENST00000615665 PTPN12Q05209 780 aaKnown RBP16.3■□□□□ 0.2
SSBP2-220ENST00000615665 GTF3C6Q969F1 213 aa16.3■□□□□ 0.2
SSBP2-220ENST00000615665 ALG1Q9BT22 464 aa16.3■□□□□ 0.2
SSBP2-220ENST00000615665 NCOA3Q9Y6Q9 1424 aa16.3■□□□□ 0.2
SSBP2-220ENST00000615665 CYP27B1O15528 508 aa16.3■□□□□ 0.2
SSBP2-220ENST00000615665 ATP6V1AP38606 617 aa16.3■□□□□ 0.2
SSBP2-220ENST00000615665 ZNF589Q86UQ0 364 aaPredicted RBP16.3■□□□□ 0.2
SSBP2-220ENST00000615665 NCOA5Q9HCD5 579 aaKnown RBP16.3■□□□□ 0.2
SSBP2-220ENST00000615665 LEO1Q8WVC0 666 aaPredicted RBP16.29■□□□□ 0.2
SSBP2-220ENST00000615665 CEP131Q9UPN4 1083 aa16.29■□□□□ 0.2
SSBP2-220ENST00000615665 BIN1O00499 593 aa16.29■□□□□ 0.2
SSBP2-220ENST00000615665 PIP4K2BP78356 416 aa16.29■□□□□ 0.2
SSBP2-220ENST00000615665 ACSBG1Q96GR2 724 aa16.29■□□□□ 0.2
SSBP2-220ENST00000615665 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.29■□□□□ 0.2
SSBP2-220ENST00000615665 LRRC24Q50LG9 513 aa16.29■□□□□ 0.2
SSBP2-220ENST00000615665 SLC26A6Q9BXS9 759 aa16.29■□□□□ 0.2
SSBP2-220ENST00000615665 CCP110O43303 1012 aa16.29■□□□□ 0.2
SSBP2-220ENST00000615665 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
SSBP2-220ENST00000615665 NECTIN1Q15223 517 aa16.29■□□□□ 0.2
SSBP2-220ENST00000615665 TXLNAP40222 546 aa16.28■□□□□ 0.2
SSBP2-220ENST00000615665 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
SSBP2-220ENST00000615665 MNS1Q8NEH6 495 aa16.28■□□□□ 0.2
SSBP2-220ENST00000615665 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
SSBP2-220ENST00000615665 RANBP6O60518 1105 aaKnown RBP16.28■□□□□ 0.2
SSBP2-220ENST00000615665 DDIT3P35638 169 aa16.28■□□□□ 0.2
SSBP2-220ENST00000615665 DDB1Q16531 1140 aa16.28■□□□□ 0.2
SSBP2-220ENST00000615665 ZDHHC9Q9Y397 364 aa16.28■□□□□ 0.2
SSBP2-220ENST00000615665 WDR17Q8IZU2 1322 aa16.28■□□□□ 0.2
SSBP2-220ENST00000615665 LARGE1O95461 756 aa16.28■□□□□ 0.2
SSBP2-220ENST00000615665 PRDM10Q9NQV6 1147 aa16.28■□□□□ 0.2
SSBP2-220ENST00000615665 ATL3Q6DD88 541 aa16.27■□□□□ 0.2
SSBP2-220ENST00000615665 IQCA1Q86XH1 822 aa16.27■□□□□ 0.2
SSBP2-220ENST00000615665 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.2
SSBP2-220ENST00000615665 E7EWF7 191 aa16.27■□□□□ 0.2
SSBP2-220ENST00000615665 LUZP1Q86V48 1076 aa16.27■□□□□ 0.2
SSBP2-220ENST00000615665 KRT23Q9C075 422 aa16.27■□□□□ 0.2
SSBP2-220ENST00000615665 CNNM2Q9H8M5 875 aa16.27■□□□□ 0.2
SSBP2-220ENST00000615665 GPAA1O43292 621 aa16.27■□□□□ 0.19
SSBP2-220ENST00000615665 CYP2E1P05181 493 aaPredicted RBP16.27■□□□□ 0.19
SSBP2-220ENST00000615665 ZAP70P43403 619 aa16.27■□□□□ 0.19
SSBP2-220ENST00000615665 CFAP100Q494V2 611 aa16.27■□□□□ 0.19
SSBP2-220ENST00000615665 HEG1Q9ULI3 1381 aa16.27■□□□□ 0.19
SSBP2-220ENST00000615665 CCDC186Q7Z3E2 898 aa16.27■□□□□ 0.19
SSBP2-220ENST00000615665 RAD21O60216 631 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 SFPQP23246 707 aaKnown RBP eCLIP16.26■□□□□ 0.19
SSBP2-220ENST00000615665 FILIP1LQ4L180 1135 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 SLC4A4Q9Y6R1 1079 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 SPTLC2O15270 562 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 ZPR1O75312 459 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 WTAPQ15007 396 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 CNNM3Q8NE01 707 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 NSFL1CQ9UNZ2 370 aaKnown RBP16.26■□□□□ 0.19
SSBP2-220ENST00000615665 IQSEC3Q9UPP2 1182 aaPredicted RBP16.26■□□□□ 0.19
SSBP2-220ENST00000615665 NEMFO60524 1076 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 PDE8AO60658 829 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 CARD10Q9BWT7 1032 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 GPR108Q9NPR9 543 aa16.26■□□□□ 0.19
SSBP2-220ENST00000615665 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
SSBP2-220ENST00000615665 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
SSBP2-220ENST00000615665 CYP7A1P22680 504 aa16.25■□□□□ 0.19
SSBP2-220ENST00000615665 NAA16Q6N069 864 aaPredicted RBP16.25■□□□□ 0.19
SSBP2-220ENST00000615665 MAGEB6Q8N7X4 407 aa16.25■□□□□ 0.19
SSBP2-220ENST00000615665 PCMTD1Q96MG8 357 aaPredicted RBP16.25■□□□□ 0.19
SSBP2-220ENST00000615665 HSPD1P10809 573 aaKnown RBP16.25■□□□□ 0.19
SSBP2-220ENST00000615665 C16orf45Q96MC5 204 aaPredicted RBP16.25■□□□□ 0.19
SSBP2-220ENST00000615665 BRAPQ7Z569 592 aa16.25■□□□□ 0.19
SSBP2-220ENST00000615665 SPATA31A3Q5VYP0 1347 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 CYP21A2P08686 494 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 SYKP43405 635 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 TTC6Q86TZ1 520 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 CTCFLQ8NI51 663 aaPredicted RBP16.24■□□□□ 0.19
SSBP2-220ENST00000615665 TTC14Q96N46 770 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 ZMYND15Q9H091 742 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms