RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 HMG20BQ9P0W2 317 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 PAXBP1Q9Y5B6 917 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 PTGS1P23219 599 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 ATP6V1AP38606 617 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 BLOC1S2Q6QNY1 142 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 CDC37L1Q7L3B6 337 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 PLA2G4DQ86XP0 818 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 DRC7Q8IY82 874 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 TDRD7Q8NHU6 1098 aaKnown RBP13.2□□□□□ -0.3
ATF3-211ENST00000613954 CLSTN2Q9H4D0 955 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 AFF2P51816 1311 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 KCNQ2O43526 872 aa13.19□□□□□ -0.3
ATF3-211ENST00000613954 ANO6Q4KMQ2 910 aa13.19□□□□□ -0.3
ATF3-211ENST00000613954 HSP90AB3PQ58FF7 597 aa13.19□□□□□ -0.3
ATF3-211ENST00000613954 GIGYF2Q6Y7W6 1299 aaKnown RBP13.19□□□□□ -0.3
ATF3-211ENST00000613954 NECAB1Q8N987 351 aa13.19□□□□□ -0.3
ATF3-211ENST00000613954 CBX8Q9HC52 389 aa13.19□□□□□ -0.3
ATF3-211ENST00000613954 CCDC87Q9NVE4 849 aa13.19□□□□□ -0.3
ATF3-211ENST00000613954 DACT1Q9NYF0 836 aa13.19□□□□□ -0.3
ATF3-211ENST00000613954 SLC27A2O14975 620 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 LIG1P18858 919 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 CDC25BP30305 580 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 ZNF75DP51815 510 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 FOXO4P98177 505 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 ATP2B3Q16720 1220 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 CCDC186Q7Z3E2 898 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 GJD4Q96KN9 370 aaPredicted RBP13.18□□□□□ -0.3
ATF3-211ENST00000613954 TRIM5Q9C035 493 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 COPRSQ9NQ92 184 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 RREB1Q92766 1687 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 NEMFO60524 1076 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 RPS6KB1P23443 525 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 RFX5P48382 616 aaPredicted RBP13.18□□□□□ -0.3
ATF3-211ENST00000613954 CAMK4Q16566 473 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 TSGA10IPQ3SY00 556 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 AACSQ86V21 672 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 ATRNO75882 1429 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
ATF3-211ENST00000613954 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
ATF3-211ENST00000613954 KRT32Q14532 448 aa13.17□□□□□ -0.3
ATF3-211ENST00000613954 INTS5Q6P9B9 1019 aaKnown RBP13.17□□□□□ -0.3
ATF3-211ENST00000613954 LMBR1LQ6UX01 489 aa13.17□□□□□ -0.3
ATF3-211ENST00000613954 LEO1Q8WVC0 666 aaPredicted RBP13.17□□□□□ -0.3
ATF3-211ENST00000613954 SASH1O94885 1247 aa13.17□□□□□ -0.3
ATF3-211ENST00000613954 PCCAP05165 728 aaPredicted RBP13.17□□□□□ -0.3
ATF3-211ENST00000613954 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
ATF3-211ENST00000613954 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
ATF3-211ENST00000613954 ITPK1Q13572 414 aa13.17□□□□□ -0.3
ATF3-211ENST00000613954 ZSCAN25Q6NSZ9 544 aa13.17□□□□□ -0.3
ATF3-211ENST00000613954 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
ATF3-211ENST00000613954 DZIP3Q86Y13 1208 aaKnown RBP13.17□□□□□ -0.3
ATF3-211ENST00000613954 SIL1Q9H173 461 aa13.17□□□□□ -0.3
ATF3-211ENST00000613954 OGFRQ9NZT2 677 aa13.17□□□□□ -0.3
ATF3-211ENST00000613954 CGNQ9P2M7 1197 aaKnown RBP13.17□□□□□ -0.3
ATF3-211ENST00000613954 TRPC5Q9UL62 973 aaPredicted RBP13.17□□□□□ -0.3
ATF3-211ENST00000613954 FAM177BA6PVY3 158 aa13.16□□□□□ -0.3
ATF3-211ENST00000613954 ZNF165P49910 485 aa13.16□□□□□ -0.3
ATF3-211ENST00000613954 PTPN12Q05209 780 aaKnown RBP13.16□□□□□ -0.3
ATF3-211ENST00000613954 HLFQ16534 295 aa13.16□□□□□ -0.3
ATF3-211ENST00000613954 CKAP2LQ8IYA6 745 aa13.16□□□□□ -0.3
ATF3-211ENST00000613954 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
ATF3-211ENST00000613954 ZSCAN16Q9H4T2 348 aaPredicted RBP13.16□□□□□ -0.3
ATF3-211ENST00000613954 CFAP45Q9UL16 551 aa13.16□□□□□ -0.3
ATF3-211ENST00000613954 MED23Q9ULK4 1368 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 CTAGE5O15320 804 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 TNNT1P13805 278 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 SARM1Q6SZW1 724 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 ZBTB38Q8NAP3 1195 aaPredicted RBP13.15□□□□□ -0.3
ATF3-211ENST00000613954 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 ONECUT3O60422 494 aaPredicted RBP13.15□□□□□ -0.3
ATF3-211ENST00000613954 NCBP1Q09161 790 aaKnown RBP13.15□□□□□ -0.3
ATF3-211ENST00000613954 CCDC112Q8NEF3 446 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 CLIP2Q9UDT6 1046 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 NHSQ6T4R5 1651 aa13.15□□□□□ -0.3
ATF3-211ENST00000613954 GOLGA6L19H0YKK7 550 aa13.14□□□□□ -0.31
ATF3-211ENST00000613954 TOB2Q14106 344 aaPredicted RBP13.14□□□□□ -0.31
ATF3-211ENST00000613954 NLRP10Q86W26 655 aa13.14□□□□□ -0.31
ATF3-211ENST00000613954 C16orf45Q96MC5 204 aaPredicted RBP13.14□□□□□ -0.31
ATF3-211ENST00000613954 FSD1Q9BTV5 496 aa13.14□□□□□ -0.31
ATF3-211ENST00000613954 PLA2G12BQ9BX93 195 aa13.14□□□□□ -0.31
ATF3-211ENST00000613954 ZHX1Q9UKY1 873 aaPredicted RBP13.14□□□□□ -0.31
ATF3-211ENST00000613954 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
ATF3-211ENST00000613954 COL5A3P25940 1745 aaPredicted RBP13.14□□□□□ -0.31
ATF3-211ENST00000613954 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
ATF3-211ENST00000613954 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.31
ATF3-211ENST00000613954 TPD52L1Q16890 204 aaPredicted RBP13.13□□□□□ -0.31
ATF3-211ENST00000613954 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
ATF3-211ENST00000613954 NUP98P52948 1817 aa13.13□□□□□ -0.31
ATF3-211ENST00000613954 GPTP24298 496 aa13.13□□□□□ -0.31
ATF3-211ENST00000613954 FAM173BQ6P4H8 233 aa13.13□□□□□ -0.31
ATF3-211ENST00000613954 GTF3C6Q969F1 213 aa13.13□□□□□ -0.31
ATF3-211ENST00000613954 EAF2Q96CJ1 260 aaPredicted RBP13.13□□□□□ -0.31
ATF3-211ENST00000613954 TFIP11Q9UBB9 837 aaKnown RBP13.13□□□□□ -0.31
ATF3-211ENST00000613954 RFX7Q2KHR2 1363 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms