RNA–Protein interactions for RNA: ENST00000612478.4

R3HCC1L-205, Transcript of R3H domain and coiled-coil containing 1 like, humanhuman

TSL 5 BASIC

Gene R3HCC1L, Length 3,337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1L-205ENST00000612478 TGFB2P61812 414 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 NOLC1Q14978 699 aaKnown RBP eCLIP5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 CC2D2BQ6DHV5 1058 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 STYK1Q6J9G0 422 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 C16orf71Q8IYS4 520 aaPredicted RBP5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 PDCL2Q8N4E4 241 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 GCC1Q96CN9 775 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 UTP14AQ9BVJ6 771 aaKnown RBP5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 GPR108Q9NPR9 543 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 GRM8O00222 908 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 POLRMTO00411 1230 aaKnown RBP5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 EPB41L2O43491 1005 aaKnown RBP5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 MBD3O95983 291 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 IRX5P78411 483 aaPredicted RBP5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 EN1Q05925 392 aaPredicted RBP5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 SLFNL1Q499Z3 407 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 EPHA10Q5JZY3 1008 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 C15orf52Q6ZUT6 534 aaKnown RBP5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 COL23A1Q86Y22 540 aaPredicted RBP5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 SH3TC1Q8TE82 1336 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 CRAMP1Q96RY5 1269 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 BRIP1Q9BX63 1249 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 SNED1Q8TER0 1413 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 PDE8AO60658 829 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 BRD1O95696 1058 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 ATP8B2P98198 1209 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 HSP90AB4PQ58FF6 505 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 TPTE2Q6XPS3 522 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 KIF3AQ9Y496 699 aa5.28□□□□□ -1.56
R3HCC1L-205ENST00000612478 DICER1Q9UPY3 1922 aaKnown RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 DNTTIP2Q5QJE6 756 aaKnown RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 SMIM5Q71RC9 77 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 SSH3Q8TE77 659 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 SETDB2Q96T68 719 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 BICC1Q9H694 974 aaKnown RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 C9orf78Q9NZ63 289 aaPredicted RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 DDX49Q9Y6V7 483 aaKnown RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 FER1L6Q2WGJ9 1857 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 PDS5AQ29RF7 1337 aaKnown RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 LTBP3Q9NS15 1303 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 RAB11FIP3O75154 756 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 TPM3P06753 285 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 PDE6BP35913 854 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 MFAP1P55081 439 aaKnown RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 TERF2Q15554 542 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 SOGA3Q5TF21 947 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 PPP4R3CPQ6ZMV5 832 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 TBC1D9Q6ZT07 1266 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 TEX2Q8IWB9 1127 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 INTS4Q96HW7 963 aaKnown RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 DNAJC2Q99543 621 aaKnown RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 USP26Q9BXU7 913 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 UBXN6Q9BZV1 441 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 COPRSQ9NQ92 184 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 FOXD4L1Q9NU39 408 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 TFCP2L1Q9NZI6 479 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 PA2G4Q9UQ80 394 aaKnown RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 UBN2Q6ZU65 1347 aa5.27□□□□□ -1.57
R3HCC1L-205ENST00000612478 SRGAP3O43295 1099 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 HMMRO75330 724 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 ST5P78524 1137 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 HLFQ16534 295 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 TSHZ3Q63HK5 1081 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 UBE3BQ7Z3V4 1068 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 KIF1BPQ96EK5 621 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 TSPYL1Q9H0U9 437 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 TCHHQ07283 1943 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 AOX1Q06278 1338 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 NCBP1Q09161 790 aaKnown RBP5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 ERC1Q8IUD2 1116 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 PLEKHM2Q8IWE5 1019 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 MPNDQ8N594 471 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 KLHDC4Q8TBB5 520 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 MAST2Q6P0Q8 1798 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 GSPT1P15170 499 aaKnown RBP5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 CAPN2P17655 700 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 FOXO4P98177 505 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 NFIXQ14938 502 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 USPL1Q5W0Q7 1092 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 ILDR2Q71H61 639 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 AMIGO3Q86WK7 504 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 KCNF1Q9H3M0 494 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 TBC1D2BQ9UPU7 963 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 PARP3Q9Y6F1 533 aa5.26□□□□□ -1.57
R3HCC1L-205ENST00000612478 POLD1P28340 1107 aa5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 CCDC152Q4G0S7 254 aa5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 DHX37Q8IY37 1157 aaKnown RBP5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 SYNE4Q8N205 404 aa5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 ZNF512BQ96KM6 892 aaPredicted RBP5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 CDC5LQ99459 802 aaKnown RBP5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 IL1RAPL2Q9NP60 686 aa5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 NSFL1CQ9UNZ2 370 aaKnown RBP5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 RFX7Q2KHR2 1363 aa5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 SALL3Q9BXA9 1300 aa5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 ZC3H4Q9UPT8 1303 aaKnown RBP5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 BBOX1O75936 387 aa5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 NPR1P16066 1061 aa5.25□□□□□ -1.57
R3HCC1L-205ENST00000612478 GPTP24298 496 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms