RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 JAK2O60674 1132 aa15.24■□□□□ 0.03
TCF3-220ENST00000611869 ADCK5Q3MIX3 580 aa15.24■□□□□ 0.03
TCF3-220ENST00000611869 ASAP1Q9ULH1 1129 aa15.24■□□□□ 0.03
TCF3-220ENST00000611869 GPAA1O43292 621 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 CBFA2T2O43439 604 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 NLRP5P59047 1200 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 FAM200AQ8TCP9 573 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 NOC3LQ8WTT2 800 aaKnown RBP15.23■□□□□ 0.03
TCF3-220ENST00000611869 IQSEC2Q5JU85 1478 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 MBD4O95243 580 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 PPFIBP1Q86W92 1011 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 KRT23Q9C075 422 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 LSG1Q9H089 658 aaKnown RBP15.23■□□□□ 0.03
TCF3-220ENST00000611869 COPRSQ9NQ92 184 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 TMEM63CQ9P1W3 806 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 FRMPD1Q5SYB0 1578 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 A0A0U1RQG5 324 aaPredicted RBP15.23■□□□□ 0.03
TCF3-220ENST00000611869 PDE8AO60658 829 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 SFPQP23246 707 aaKnown RBP eCLIP15.23■□□□□ 0.03
TCF3-220ENST00000611869 APPBP2Q92624 585 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 MAGEC2Q9UBF1 373 aaPredicted RBP15.23■□□□□ 0.03
TCF3-220ENST00000611869 LMTK3Q96Q04 1460 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 SSH2Q76I76 1423 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 ADAMTS13Q76LX8 1427 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 ZC3H13Q5T200 1668 aaKnown RBP15.23■□□□□ 0.03
TCF3-220ENST00000611869 RTN1Q16799 776 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 TM6SF1Q9BZW5 370 aa15.23■□□□□ 0.03
TCF3-220ENST00000611869 TTC12Q9H892 705 aaPredicted RBP15.23■□□□□ 0.03
TCF3-220ENST00000611869 CLCN1P35523 988 aa15.22■□□□□ 0.03
TCF3-220ENST00000611869 ESR2Q92731 530 aa15.22■□□□□ 0.03
TCF3-220ENST00000611869 ZKSCAN3Q9BRR0 538 aa15.22■□□□□ 0.03
TCF3-220ENST00000611869 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
TCF3-220ENST00000611869 CYP27B1O15528 508 aa15.22■□□□□ 0.03
TCF3-220ENST00000611869 EPB41L2O43491 1005 aaKnown RBP15.22■□□□□ 0.03
TCF3-220ENST00000611869 TYRO3Q06418 890 aa15.22■□□□□ 0.03
TCF3-220ENST00000611869 CDC37L1Q7L3B6 337 aa15.22■□□□□ 0.03
TCF3-220ENST00000611869 MRPS27Q92552 414 aaKnown RBP15.22■□□□□ 0.03
TCF3-220ENST00000611869 B4E1Z4 1266 aa15.22■□□□□ 0.03
TCF3-220ENST00000611869 SSBP05455 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
TCF3-220ENST00000611869 OTUD7BQ6GQQ9 843 aa15.22■□□□□ 0.03
TCF3-220ENST00000611869 PUS3Q9BZE2 481 aaKnown RBP15.22■□□□□ 0.03
TCF3-220ENST00000611869 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
TCF3-220ENST00000611869 STX8Q9UNK0 236 aa15.22■□□□□ 0.03
TCF3-220ENST00000611869 MPHOSPH10O00566 681 aaKnown RBP15.21■□□□□ 0.03
TCF3-220ENST00000611869 DHX8Q14562 1220 aaKnown RBP15.21■□□□□ 0.03
TCF3-220ENST00000611869 CNNM2Q9H8M5 875 aa15.21■□□□□ 0.03
TCF3-220ENST00000611869 ZNF287Q9HBT7 754 aa15.21■□□□□ 0.03
TCF3-220ENST00000611869 NAP1L1P55209 391 aaKnown RBP15.21■□□□□ 0.03
TCF3-220ENST00000611869 POLA2Q14181 598 aa15.21■□□□□ 0.03
TCF3-220ENST00000611869 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.03
TCF3-220ENST00000611869 DLC1Q96QB1 1528 aa15.21■□□□□ 0.03
TCF3-220ENST00000611869 DEPDC5O75140 1603 aa15.21■□□□□ 0.03
TCF3-220ENST00000611869 SYKP43405 635 aa15.21■□□□□ 0.03
TCF3-220ENST00000611869 PDE4BQ07343 736 aa15.21■□□□□ 0.03
TCF3-220ENST00000611869 KCNG4Q8TDN1 519 aa15.21■□□□□ 0.03
TCF3-220ENST00000611869 CCDC43Q96MW1 224 aaKnown RBP15.21■□□□□ 0.03
TCF3-220ENST00000611869 CRNKL1Q9BZJ0 848 aaKnown RBP15.21■□□□□ 0.03
TCF3-220ENST00000611869 PPP1R1BQ9UD71 204 aaPredicted RBP15.21■□□□□ 0.03
TCF3-220ENST00000611869 SASH1O94885 1247 aa15.2■□□□□ 0.02
TCF3-220ENST00000611869 CCDC24Q8N4L8 307 aa15.2■□□□□ 0.02
TCF3-220ENST00000611869 SMARCE1Q969G3 411 aa15.2■□□□□ 0.02
TCF3-220ENST00000611869 C16orf45Q96MC5 204 aaPredicted RBP15.2■□□□□ 0.02
TCF3-220ENST00000611869 TRMT1Q9NXH9 659 aaKnown RBP15.2■□□□□ 0.02
TCF3-220ENST00000611869 KRT18P05783 430 aaKnown RBP15.2■□□□□ 0.02
TCF3-220ENST00000611869 STIM1Q13586 685 aa15.2■□□□□ 0.02
TCF3-220ENST00000611869 PUM3Q15397 648 aaKnown RBP15.2■□□□□ 0.02
TCF3-220ENST00000611869 TPCN1Q9ULQ1 816 aa15.2■□□□□ 0.02
TCF3-220ENST00000611869 SPTLC2O15270 562 aa15.2■□□□□ 0.02
TCF3-220ENST00000611869 GOLGA6L1Q8N7Z2 621 aa15.2■□□□□ 0.02
TCF3-220ENST00000611869 MAGEB6P1A0A0J9YX57 407 aa15.2■□□□□ 0.02
TCF3-220ENST00000611869 IFIT1BQ5T764 474 aaKnown RBP15.2■□□□□ 0.02
TCF3-220ENST00000611869 PI4K2BQ8TCG2 481 aa15.2■□□□□ 0.02
TCF3-220ENST00000611869 WDR17Q8IZU2 1322 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 CCDC102BQ68D86 513 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 TPTE2Q6XPS3 522 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 GAS2L3Q86XJ1 694 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 ARMT1Q9H993 441 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 VAT1LQ9HCJ6 419 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 OVOS2A0A0J9YW53 1432 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 OVOS2Q6IE36 1432 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 AGLP35573 1532 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 CCDC194A0A1B0GVG4 234 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 ZNF445P59923 1031 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 ZSWIM6Q9HCJ5 1215 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 BAG3O95817 575 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 CARD10Q9BWT7 1032 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 CDC42BPGQ6DT37 1551 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 ERBB4Q15303 1308 aa15.19■□□□□ 0.02
TCF3-220ENST00000611869 CCP110O43303 1012 aa15.18■□□□□ 0.02
TCF3-220ENST00000611869 IGKV5-2P06315 115 aa15.18■□□□□ 0.02
TCF3-220ENST00000611869 EPS15P42566 896 aa15.18■□□□□ 0.02
TCF3-220ENST00000611869 CRB1P82279 1406 aa15.18■□□□□ 0.02
TCF3-220ENST00000611869 MAP7D2Q96T17 732 aa15.18■□□□□ 0.02
TCF3-220ENST00000611869 KAT14Q9H8E8 782 aa15.18■□□□□ 0.02
TCF3-220ENST00000611869 ADGRL3Q9HAR2 1447 aa15.18■□□□□ 0.02
TCF3-220ENST00000611869 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
TCF3-220ENST00000611869 GNPATO15228 680 aa15.18■□□□□ 0.02
TCF3-220ENST00000611869 LDHCP07864 332 aa15.18■□□□□ 0.02
TCF3-220ENST00000611869 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms