RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 G3BP1Q13283 466 aaKnown RBP eCLIP10.52□□□□□ -0.72
ZNF248-208ENST00000611278 PABPC4Q13310 644 aaKnown RBP eCLIP10.52□□□□□ -0.72
ZNF248-208ENST00000611278 DGKZQ13574 1117 aa10.52□□□□□ -0.72
ZNF248-208ENST00000611278 DOK7Q18PE1 504 aa10.52□□□□□ -0.72
ZNF248-208ENST00000611278 ADAMTSL1Q8N6G6 1762 aa10.52□□□□□ -0.73
ZNF248-208ENST00000611278 IL16Q14005 1332 aa10.52□□□□□ -0.73
ZNF248-208ENST00000611278 ANXA1P04083 346 aa10.52□□□□□ -0.73
ZNF248-208ENST00000611278 UBTFL1P0CB47 393 aaPredicted RBP10.52□□□□□ -0.73
ZNF248-208ENST00000611278 RGMBQ6NW40 437 aa10.52□□□□□ -0.73
ZNF248-208ENST00000611278 PRKRIP1Q9H875 184 aaPredicted RBP10.52□□□□□ -0.73
ZNF248-208ENST00000611278 SIPA1L3O60292 1781 aaPredicted RBP10.52□□□□□ -0.73
ZNF248-208ENST00000611278 POTEIP0CG38 1075 aa10.52□□□□□ -0.73
ZNF248-208ENST00000611278 POTEJP0CG39 1038 aa10.52□□□□□ -0.73
ZNF248-208ENST00000611278 PKN2Q16513 984 aaKnown RBP10.52□□□□□ -0.73
ZNF248-208ENST00000611278 GPRC5DQ9NZD1 345 aa10.52□□□□□ -0.73
ZNF248-208ENST00000611278 AKAP2Q9Y2D5 859 aa10.52□□□□□ -0.73
ZNF248-208ENST00000611278 CACNA1SQ13698 1873 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 RIC1Q4ADV7 1423 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 ALDH1L1O75891 902 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 SLC10A5Q5PT55 438 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 B4GALNT3Q6L9W6 998 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 ADAMTS8Q9UP79 889 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 PRAMEF22A3QJZ6 481 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 HMMRO75330 724 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 GNAI3P08754 354 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 RGS19P49795 217 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 GSTO1P78417 241 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 TTLL5Q6EMB2 1281 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 ZNF34Q8IZ26 560 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 LRRFIP2Q9Y608 721 aaKnown RBP10.51□□□□□ -0.73
ZNF248-208ENST00000611278 THSD7BQ9C0I4 1608 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 CEMIPQ8WUJ3 1361 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 ZNF541Q9H0D2 1346 aa10.51□□□□□ -0.73
ZNF248-208ENST00000611278 ERO1AQ96HE7 468 aa10.5□□□□□ -0.73
ZNF248-208ENST00000611278 CCER2I3L3R5 266 aa10.5□□□□□ -0.73
ZNF248-208ENST00000611278 CHL1O00533 1208 aa10.5□□□□□ -0.73
ZNF248-208ENST00000611278 HLFQ16534 295 aa10.5□□□□□ -0.73
ZNF248-208ENST00000611278 DZIP1Q86YF9 867 aaKnown RBP10.5□□□□□ -0.73
ZNF248-208ENST00000611278 HHIPL1Q96JK4 782 aa10.5□□□□□ -0.73
ZNF248-208ENST00000611278 PICK1Q9NRD5 415 aa10.5□□□□□ -0.73
ZNF248-208ENST00000611278 PI4KAP2A4QPH2 592 aa10.5□□□□□ -0.73
ZNF248-208ENST00000611278 SLC4A8Q2Y0W8 1093 aa10.5□□□□□ -0.73
ZNF248-208ENST00000611278 PI4KAP1Q8N8J0 262 aa10.5□□□□□ -0.73
ZNF248-208ENST00000611278 ISY1Q9ULR0 285 aaKnown RBP10.5□□□□□ -0.73
ZNF248-208ENST00000611278 MANSC4A6NHS7 340 aaPredicted RBP10.5□□□□□ -0.73
ZNF248-208ENST00000611278 CCT4P50991 539 aaKnown RBP10.5□□□□□ -0.73
ZNF248-208ENST00000611278 PPP2R3BQ9Y5P8 575 aa10.5□□□□□ -0.73
ZNF248-208ENST00000611278 CTSWP56202 376 aa10.49□□□□□ -0.73
ZNF248-208ENST00000611278 SF3B3Q15393 1217 aaKnown RBP10.49□□□□□ -0.73
ZNF248-208ENST00000611278 HSP90AB4PQ58FF6 505 aa10.49□□□□□ -0.73
ZNF248-208ENST00000611278 ABCC4O15439 1325 aa10.49□□□□□ -0.73
ZNF248-208ENST00000611278 CXCL9Q07325 125 aa10.49□□□□□ -0.73
ZNF248-208ENST00000611278 FLIIQ13045 1269 aa10.49□□□□□ -0.73
ZNF248-208ENST00000611278 TRIM28Q13263 835 aaKnown RBP10.49□□□□□ -0.73
ZNF248-208ENST00000611278 PKNOX2Q96KN3 472 aa10.49□□□□□ -0.73
ZNF248-208ENST00000611278 GGA3Q9NZ52 723 aa10.49□□□□□ -0.73
ZNF248-208ENST00000611278 TRPM7Q96QT4 1865 aa10.48□□□□□ -0.73
ZNF248-208ENST00000611278 GPATCH3Q96I76 525 aa10.48□□□□□ -0.73
ZNF248-208ENST00000611278 ANGEL1Q9UNK9 670 aaKnown RBP10.48□□□□□ -0.73
ZNF248-208ENST00000611278 FAM161AQ3B820 660 aa10.48□□□□□ -0.73
ZNF248-208ENST00000611278 TLL2Q9Y6L7 1015 aa10.48□□□□□ -0.73
ZNF248-208ENST00000611278 KIF16BQ96L93 1317 aa10.48□□□□□ -0.73
ZNF248-208ENST00000611278 CT47B1P0C2W7 299 aaPredicted RBP10.48□□□□□ -0.73
ZNF248-208ENST00000611278 HIBADHP31937 336 aaKnown RBP10.48□□□□□ -0.73
ZNF248-208ENST00000611278 RSBN1LQ6PCB5 846 aaPredicted RBP10.48□□□□□ -0.73
ZNF248-208ENST00000611278 F8W031 263 aaPredicted RBP10.47□□□□□ -0.73
ZNF248-208ENST00000611278 GTF2IP78347 998 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 WDR66Q8TBY9 1149 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 ZFYVE28Q9HCC9 887 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 MBIPQ9NS73 344 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 NTSR2O95665 410 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 UBXN2AP68543 259 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 NCBP3Q53F19 620 aaKnown RBP10.47□□□□□ -0.73
ZNF248-208ENST00000611278 PRKG1Q13976 671 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 CRY2Q49AN0 593 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 ZNF804BA4D1E1 1349 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 EPS15P42566 896 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 CCDC158Q5M9N0 1113 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 TEKT1Q969V4 418 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 TAOK2Q9UL54 1235 aa10.47□□□□□ -0.73
ZNF248-208ENST00000611278 COL3A1P02461 1466 aaPredicted RBP10.46□□□□□ -0.73
ZNF248-208ENST00000611278 GLRX3O76003 335 aaKnown RBP10.46□□□□□ -0.73
ZNF248-208ENST00000611278 BAG3O95817 575 aa10.46□□□□□ -0.73
ZNF248-208ENST00000611278 CRACR2BQ8N4Y2 399 aaPredicted RBP10.46□□□□□ -0.73
ZNF248-208ENST00000611278 NBPF26B4DH59 902 aa10.46□□□□□ -0.74
ZNF248-208ENST00000611278 FKTNO75072 461 aa10.46□□□□□ -0.74
ZNF248-208ENST00000611278 PLCG2P16885 1265 aa10.46□□□□□ -0.74
ZNF248-208ENST00000611278 ITGA6P23229 1130 aa10.46□□□□□ -0.74
ZNF248-208ENST00000611278 STRIP1Q5VSL9 837 aa10.46□□□□□ -0.74
ZNF248-208ENST00000611278 NBPF10Q6P3W6 841 aaKnown RBP10.46□□□□□ -0.74
ZNF248-208ENST00000611278 CTU1Q7Z7A3 348 aaKnown RBP10.46□□□□□ -0.74
ZNF248-208ENST00000611278 GLIS2Q9BZE0 524 aaPredicted RBP10.46□□□□□ -0.74
ZNF248-208ENST00000611278 BSDC1Q9NW68 430 aaPredicted RBP10.46□□□□□ -0.74
ZNF248-208ENST00000611278 HLA-DOAP06340 250 aa10.46□□□□□ -0.74
ZNF248-208ENST00000611278 BRPF1P55201 1214 aaPredicted RBP10.46□□□□□ -0.74
ZNF248-208ENST00000611278 PSMD14O00487 310 aa10.45□□□□□ -0.74
ZNF248-208ENST00000611278 KIAA0825Q8IV33 1275 aa10.45□□□□□ -0.74
ZNF248-208ENST00000611278 NR2E3Q9Y5X4 410 aa10.45□□□□□ -0.74
ZNF248-208ENST00000611278 FRAT1Q92837 279 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms