RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 CLEC17AQ6ZS10 378 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 MIGA1Q8NAN2 632 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 TTC14Q96N46 770 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 CLIC6Q96NY7 704 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 DESI2Q9BSY9 194 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 RABEP2Q9H5N1 569 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 DDX21Q9NR30 783 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM1-233ENST00000610733 A0A1B0GUL7 405 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 TAF5LO75529 589 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 NDUFA8P51970 172 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 AMOTQ4VCS5 1084 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 GOLGA6L1Q8N7Z2 621 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 MAP4K1Q92918 833 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 CLIC4Q9Y696 253 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 B4E1Z4 1266 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 ALDH1L1O75891 902 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 METAP2P50579 478 aaKnown RBP eCLIP11.08□□□□□ -0.64
TPM1-233ENST00000610733 ENOX2Q16206 610 aaKnown RBP11.08□□□□□ -0.64
TPM1-233ENST00000610733 KRT222Q8N1A0 295 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 KCNH5Q8NCM2 988 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 CARD6Q9BX69 1037 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 GOLGA8AA7E2F4 631 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 SLU7O95391 586 aaKnown RBP11.08□□□□□ -0.64
TPM1-233ENST00000610733 NECTIN1Q15223 517 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 LRRFIP1Q32MZ4 808 aaKnown RBP11.08□□□□□ -0.64
TPM1-233ENST00000610733 TTLL7Q6ZT98 887 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 CCDC12Q8WUD4 166 aaPredicted RBP11.08□□□□□ -0.64
TPM1-233ENST00000610733 ZSCAN16Q9H4T2 348 aaPredicted RBP11.08□□□□□ -0.64
TPM1-233ENST00000610733 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
TPM1-233ENST00000610733 SNAP23O00161 211 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 TPM1P09493 284 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 IFIT5Q13325 482 aaKnown RBP11.07□□□□□ -0.64
TPM1-233ENST00000610733 TMEM67Q5HYA8 995 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 PPFIBP1Q86W92 1011 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 IP6K1Q92551 441 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 GDAP1L1Q96MZ0 367 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 PLIN2Q99541 437 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 NOL10Q9BSC4 688 aaKnown RBP11.07□□□□□ -0.64
TPM1-233ENST00000610733 HMG20BQ9P0W2 317 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 LRP2BPQ9P2M1 347 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 TTC21AQ8NDW8 1320 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 PPRC1Q5VV67 1664 aaKnown RBP11.07□□□□□ -0.64
TPM1-233ENST00000610733 SNRPA1P09661 255 aaKnown RBP11.07□□□□□ -0.64
TPM1-233ENST00000610733 ATP1A3P13637 1013 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 LMAN1P49257 510 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 PNOCQ13519 176 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 KIF4BQ2VIQ3 1234 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 ANKLE2Q86XL3 938 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 NAPBQ9H115 298 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 PAXBP1Q9Y5B6 917 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 PLEKHG3A1L390 1219 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 NEURL1BA8MQ27 555 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 IARSP41252 1262 aaKnown RBP11.07□□□□□ -0.64
TPM1-233ENST00000610733 TOB2Q14106 344 aaPredicted RBP11.07□□□□□ -0.64
TPM1-233ENST00000610733 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
TPM1-233ENST00000610733 TAF3Q5VWG9 929 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 SRRTQ9BXP5 876 aaKnown RBP11.07□□□□□ -0.64
TPM1-233ENST00000610733 MED14O60244 1454 aa11.07□□□□□ -0.64
TPM1-233ENST00000610733 CPS1P31327 1500 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 RANBP6O60518 1105 aaKnown RBP11.06□□□□□ -0.64
TPM1-233ENST00000610733 ADKP55263 362 aaKnown RBP11.06□□□□□ -0.64
TPM1-233ENST00000610733 FAM160A1Q05DH4 1040 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 LRRC8AQ8IWT6 810 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 CAGE1Q8TC20 777 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 SECISBP2LQ93073 1101 aaKnown RBP11.06□□□□□ -0.64
TPM1-233ENST00000610733 CWC25Q9NXE8 425 aaPredicted RBP11.06□□□□□ -0.64
TPM1-233ENST00000610733 KCNJ14Q9UNX9 436 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 E7EWF7 191 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 RAI14Q9P0K7 980 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 PCDHA7Q9UN72 937 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 MYOM1P52179 1685 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 PRDM1O75626 825 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 RHOXF2BP0C7M4 288 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 IRX3P78415 501 aaPredicted RBP11.06□□□□□ -0.64
TPM1-233ENST00000610733 NCBP1Q09161 790 aaKnown RBP11.06□□□□□ -0.64
TPM1-233ENST00000610733 JMYQ8N9B5 988 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 MPHOSPH8Q99549 860 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 RHOXF2Q9BQY4 288 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 CTNNA3Q9UI47 895 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 SLC12A7Q9Y666 1083 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
TPM1-233ENST00000610733 CCDC66A2RUB6 948 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 SEC31AO94979 1220 aaKnown RBP11.05□□□□□ -0.64
TPM1-233ENST00000610733 ADORA1P30542 326 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 GYS2P54840 703 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 KIF6Q6ZMV9 814 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 TRIM22Q8IYM9 498 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 TRMT112Q9UI30 125 aaKnown RBP11.05□□□□□ -0.64
TPM1-233ENST00000610733 ZNF202O95125 648 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 CASQ1P31415 396 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 UTP14CQ5TAP6 766 aaKnown RBP11.05□□□□□ -0.64
TPM1-233ENST00000610733 DHX58Q96C10 678 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 HOOK1Q9UJC3 728 aaKnown RBP11.05□□□□□ -0.64
TPM1-233ENST00000610733 MARCH6O60337 910 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 CLSTN1O94985 981 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 ZAP70P43403 619 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 HSP90B2PQ58FF3 399 aa11.05□□□□□ -0.64
TPM1-233ENST00000610733 AXDND1Q5T1B0 1012 aaPredicted RBP11.05□□□□□ -0.64
TPM1-233ENST00000610733 GRAMD1CQ8IYS0 662 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms