RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 MMP20O60882 483 aa7.76□□□□□ -1.17
SMCHD1-213ENST00000609587 GHRHP01286 108 aa7.76□□□□□ -1.17
SMCHD1-213ENST00000609587 SSFA2P28290 1259 aa7.76□□□□□ -1.17
SMCHD1-213ENST00000609587 COX20Q5RI15 118 aa7.76□□□□□ -1.17
SMCHD1-213ENST00000609587 ACAD11Q709F0 780 aa7.76□□□□□ -1.17
SMCHD1-213ENST00000609587 FAM46AQ96IP4 442 aaKnown RBP7.76□□□□□ -1.17
SMCHD1-213ENST00000609587 KRTAP4-2Q9BYR5 136 aa7.76□□□□□ -1.17
SMCHD1-213ENST00000609587 KCNK4Q9NYG8 393 aa7.76□□□□□ -1.17
SMCHD1-213ENST00000609587 OPLAHO14841 1288 aa7.75□□□□□ -1.17
SMCHD1-213ENST00000609587 XYLBO75191 536 aa7.75□□□□□ -1.17
SMCHD1-213ENST00000609587 C16orf46Q6P387 395 aa7.75□□□□□ -1.17
SMCHD1-213ENST00000609587 CEP41Q9BYV8 373 aa7.75□□□□□ -1.17
SMCHD1-213ENST00000609587 WNT11O96014 354 aa7.74□□□□□ -1.17
SMCHD1-213ENST00000609587 PSAPP07602 524 aa7.74□□□□□ -1.17
SMCHD1-213ENST00000609587 SOX18P35713 384 aa7.74□□□□□ -1.17
SMCHD1-213ENST00000609587 PHLDB3Q6NSJ2 640 aa7.74□□□□□ -1.17
SMCHD1-213ENST00000609587 CAPN12Q6ZSI9 719 aa7.74□□□□□ -1.17
SMCHD1-213ENST00000609587 MYRFLQ96LU7 910 aa7.74□□□□□ -1.17
SMCHD1-213ENST00000609587 MKNK1Q9BUB5 465 aa7.74□□□□□ -1.17
SMCHD1-213ENST00000609587 OGFOD2Q6N063 350 aa7.73□□□□□ -1.17
SMCHD1-213ENST00000609587 TXNDC11Q6PKC3 985 aa7.73□□□□□ -1.17
SMCHD1-213ENST00000609587 KIAA1211Q6ZU35 1233 aa7.73□□□□□ -1.17
SMCHD1-213ENST00000609587 RGL4Q8IZJ4 473 aa7.73□□□□□ -1.17
SMCHD1-213ENST00000609587 ABI1Q8IZP0 508 aa7.73□□□□□ -1.17
SMCHD1-213ENST00000609587 SAP130Q9H0E3 1048 aa7.73□□□□□ -1.17
SMCHD1-213ENST00000609587 PPME1Q9Y570 386 aa7.73□□□□□ -1.17
SMCHD1-213ENST00000609587 LINC01387J3KSC0 135 aa7.72□□□□□ -1.17
SMCHD1-213ENST00000609587 CD68P34810 354 aaPredicted RBP7.72□□□□□ -1.17
SMCHD1-213ENST00000609587 SHKBP1Q8TBC3 707 aa7.72□□□□□ -1.17
SMCHD1-213ENST00000609587 MUC3BQ9H195 1237 aa7.72□□□□□ -1.17
SMCHD1-213ENST00000609587 KCNMB2Q9Y691 235 aa7.72□□□□□ -1.17
SMCHD1-213ENST00000609587 TNFRSF10BO14763 440 aa7.71□□□□□ -1.18
SMCHD1-213ENST00000609587 BRD2P25440 801 aaKnown RBP7.71□□□□□ -1.18
SMCHD1-213ENST00000609587 NAA30Q147X3 362 aaPredicted RBP7.71□□□□□ -1.18
SMCHD1-213ENST00000609587 LCE4AQ5TA78 99 aa7.71□□□□□ -1.18
SMCHD1-213ENST00000609587 CARD10Q9BWT7 1032 aa7.71□□□□□ -1.18
SMCHD1-213ENST00000609587 RBSNQ9H1K0 784 aa7.71□□□□□ -1.18
SMCHD1-213ENST00000609587 PODXL2Q9NZ53 605 aa7.71□□□□□ -1.18
SMCHD1-213ENST00000609587 IVNS1ABPQ9Y6Y0 642 aa7.71□□□□□ -1.18
SMCHD1-213ENST00000609587 HOXA10P31260 410 aaPredicted RBP7.7□□□□□ -1.18
SMCHD1-213ENST00000609587 TRIP4Q15650 581 aaPredicted RBP7.7□□□□□ -1.18
SMCHD1-213ENST00000609587 ADAMTSL4Q6UY14 1074 aa7.7□□□□□ -1.18
SMCHD1-213ENST00000609587 TREML1Q86YW5 311 aa7.7□□□□□ -1.18
SMCHD1-213ENST00000609587 FAM20CQ8IXL6 584 aa7.7□□□□□ -1.18
SMCHD1-213ENST00000609587 CCER1Q8TC90 406 aaPredicted RBP7.7□□□□□ -1.18
SMCHD1-213ENST00000609587 FOXD4L4Q8WXT5 416 aaPredicted RBP7.7□□□□□ -1.18
SMCHD1-213ENST00000609587 ADAM11O75078 769 aa7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 SCNN1AP37088 669 aa7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 ATP11AP98196 1134 aa7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 TXNDC2Q86VQ3 553 aa7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 ETFBKMTQ8IXQ9 262 aa7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 CMTR1Q8N1G2 835 aaKnown RBP7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 CACTIN-AS1Q8N1I8 211 aa7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 UBASH3BQ8TF42 649 aa7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 GZF1Q9H116 711 aaPredicted RBP7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 STIM2Q9P246 746 aa7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 SEPT3Q9UH03 358 aa7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 MTMR7Q9Y216 660 aa7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 GNEQ9Y223 722 aaKnown RBP7.69□□□□□ -1.18
SMCHD1-213ENST00000609587 FAM83CQ9BQN1 747 aa7.68□□□□□ -1.18
SMCHD1-213ENST00000609587 LACRTQ9GZZ8 138 aa7.68□□□□□ -1.18
SMCHD1-213ENST00000609587 C8AP07357 584 aa7.67□□□□□ -1.18
SMCHD1-213ENST00000609587 PREPP48147 710 aa7.67□□□□□ -1.18
SMCHD1-213ENST00000609587 FAM26DQ5JW98 314 aa7.67□□□□□ -1.18
SMCHD1-213ENST00000609587 COL13A1Q5TAT6 717 aaPredicted RBP7.67□□□□□ -1.18
SMCHD1-213ENST00000609587 BEND4Q6ZU67 534 aa7.67□□□□□ -1.18
SMCHD1-213ENST00000609587 CLEC10AQ8IUN9 316 aa7.67□□□□□ -1.18
SMCHD1-213ENST00000609587 DDX3YO15523 660 aaKnown RBP7.66□□□□□ -1.18
SMCHD1-213ENST00000609587 DUOXA2Q1HG44 320 aa7.66□□□□□ -1.18
SMCHD1-213ENST00000609587 NFXL1Q6ZNB6 911 aa7.66□□□□□ -1.18
SMCHD1-213ENST00000609587 ABTB2Q8N961 1025 aa7.66□□□□□ -1.18
SMCHD1-213ENST00000609587 HELQQ8TDG4 1101 aa7.66□□□□□ -1.18
SMCHD1-213ENST00000609587 FSCN2O14926 492 aa7.65□□□□□ -1.18
SMCHD1-213ENST00000609587 BMP3P12645 472 aa7.65□□□□□ -1.18
SMCHD1-213ENST00000609587 CDC25BP30305 580 aa7.65□□□□□ -1.18
SMCHD1-213ENST00000609587 SERPINB4P48594 390 aa7.65□□□□□ -1.18
SMCHD1-213ENST00000609587 MSMPQ1L6U9 139 aa7.65□□□□□ -1.18
SMCHD1-213ENST00000609587 CBLL1Q75N03 491 aa7.65□□□□□ -1.18
SMCHD1-213ENST00000609587 POU5F2Q8N7G0 328 aa7.65□□□□□ -1.18
SMCHD1-213ENST00000609587 GTF3C2Q8WUA4 911 aaPredicted RBP7.65□□□□□ -1.18
SMCHD1-213ENST00000609587 FAM13BQ9NYF5 915 aa7.65□□□□□ -1.18
SMCHD1-213ENST00000609587 WDR64B1ANS9 1081 aa7.64□□□□□ -1.19
SMCHD1-213ENST00000609587 EPHA1P21709 976 aa7.64□□□□□ -1.19
SMCHD1-213ENST00000609587 CDC27P30260 824 aa7.64□□□□□ -1.19
SMCHD1-213ENST00000609587 NLRP13Q86W25 1043 aa7.64□□□□□ -1.19
SMCHD1-213ENST00000609587 KCNF1Q9H3M0 494 aa7.64□□□□□ -1.19
SMCHD1-213ENST00000609587 PIM2Q9P1W9 311 aa7.64□□□□□ -1.19
SMCHD1-213ENST00000609587 ZBTB39O15060 712 aa7.63□□□□□ -1.19
SMCHD1-213ENST00000609587 ABL1P00519 1130 aa7.63□□□□□ -1.19
SMCHD1-213ENST00000609587 ZAP70P43403 619 aa7.63□□□□□ -1.19
SMCHD1-213ENST00000609587 CEP135Q66GS9 1140 aa7.63□□□□□ -1.19
SMCHD1-213ENST00000609587 KLHL23Q8NBE8 558 aa7.63□□□□□ -1.19
SMCHD1-213ENST00000609587 OR13H1Q8NG92 308 aa7.63□□□□□ -1.19
SMCHD1-213ENST00000609587 PIK3R5Q8WYR1 880 aa7.63□□□□□ -1.19
SMCHD1-213ENST00000609587 MFSD14AQ96MC6 490 aa7.63□□□□□ -1.19
SMCHD1-213ENST00000609587 NPR3P17342 541 aa7.62□□□□□ -1.19
SMCHD1-213ENST00000609587 TMCO4Q5TGY1 634 aa7.62□□□□□ -1.19
SMCHD1-213ENST00000609587 ANKRD34AQ69YU3 496 aa7.62□□□□□ -1.19
SMCHD1-213ENST00000609587 RASSF4Q9H2L5 321 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms