RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 PLA2G12BQ9BX93 195 aa17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 LEMD3Q9Y2U8 911 aa17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 MYH3P11055 1940 aa17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 MED23Q9ULK4 1368 aa17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 CASP8AP2Q9UKL3 1982 aa17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 ZNF609O15014 1411 aa17.11■□□□□ 0.33
POLR2J3-219ENST00000608621 CSF1RP07333 972 aa17.1■□□□□ 0.33
POLR2J3-219ENST00000608621 ITGA6P23229 1130 aa17.1■□□□□ 0.33
POLR2J3-219ENST00000608621 CASP7P55210 303 aa17.1■□□□□ 0.33
POLR2J3-219ENST00000608621 TXNRD3Q86VQ6 643 aa17.1■□□□□ 0.33
POLR2J3-219ENST00000608621 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
POLR2J3-219ENST00000608621 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
POLR2J3-219ENST00000608621 FANCIQ9NVI1 1328 aa17.1■□□□□ 0.33
POLR2J3-219ENST00000608621 PSME4Q14997 1843 aa17.1■□□□□ 0.33
POLR2J3-219ENST00000608621 CCDC85CA6NKD9 419 aa17.09■□□□□ 0.33
POLR2J3-219ENST00000608621 ANP32CO43423 234 aa17.09■□□□□ 0.33
POLR2J3-219ENST00000608621 EXOSC9Q06265 439 aaKnown RBP17.09■□□□□ 0.33
POLR2J3-219ENST00000608621 DACT2Q5SW24 774 aa17.09■□□□□ 0.33
POLR2J3-219ENST00000608621 LINS1Q8NG48 757 aa17.09■□□□□ 0.33
POLR2J3-219ENST00000608621 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
POLR2J3-219ENST00000608621 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
POLR2J3-219ENST00000608621 COA1Q9GZY4 146 aa17.09■□□□□ 0.33
POLR2J3-219ENST00000608621 SCAF8Q9UPN6 1271 aaKnown RBP17.09■□□□□ 0.33
POLR2J3-219ENST00000608621 SPEF2Q9C093 1822 aa17.09■□□□□ 0.33
POLR2J3-219ENST00000608621 ZNF804BA4D1E1 1349 aa17.08■□□□□ 0.32
POLR2J3-219ENST00000608621 FAM161AQ3B820 660 aa17.08■□□□□ 0.32
POLR2J3-219ENST00000608621 NBPF9Q3BBW0 867 aa17.08■□□□□ 0.32
POLR2J3-219ENST00000608621 STRIP1Q5VSL9 837 aa17.08■□□□□ 0.32
POLR2J3-219ENST00000608621 ANKRD2Q9GZV1 360 aa17.08■□□□□ 0.32
POLR2J3-219ENST00000608621 PITPNM2Q9BZ72 1349 aa17.07■□□□□ 0.32
POLR2J3-219ENST00000608621 OGFOD1Q8N543 542 aa17.07■□□□□ 0.32
POLR2J3-219ENST00000608621 MCOLN1Q9GZU1 580 aa17.07■□□□□ 0.32
POLR2J3-219ENST00000608621 SLC10A3P09131 477 aa17.06■□□□□ 0.32
POLR2J3-219ENST00000608621 PRAMEF18Q5VWM3 479 aa17.06■□□□□ 0.32
POLR2J3-219ENST00000608621 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
POLR2J3-219ENST00000608621 CSRNP1Q96S65 589 aa17.06■□□□□ 0.32
POLR2J3-219ENST00000608621 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
POLR2J3-219ENST00000608621 RNF186Q9NXI6 227 aa17.06■□□□□ 0.32
POLR2J3-219ENST00000608621 MYO3BQ8WXR4 1341 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 ANKRD18BA2A2Z9 1011 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 F6X3S4 739 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 WNT10BO00744 389 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 TRPA1O75762 1119 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 KLRK1P26718 216 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 FKBP1BP68106 108 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 CHRNDQ07001 517 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 DGKZQ13574 1117 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 MOB2Q70IA6 237 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 CACNA1FO60840 1977 aa17.05■□□□□ 0.32
POLR2J3-219ENST00000608621 SNAP23O00161 211 aa17.04■□□□□ 0.32
POLR2J3-219ENST00000608621 KCNJ4P48050 445 aa17.04■□□□□ 0.32
POLR2J3-219ENST00000608621 GTF2IP78347 998 aa17.04■□□□□ 0.32
POLR2J3-219ENST00000608621 FOXO4P98177 505 aa17.04■□□□□ 0.32
POLR2J3-219ENST00000608621 BEND3Q5T5X7 828 aa17.04■□□□□ 0.32
POLR2J3-219ENST00000608621 HELBQ8NG08 1087 aaPredicted RBP17.04■□□□□ 0.32
POLR2J3-219ENST00000608621 SAGE1Q9NXZ1 904 aa17.04■□□□□ 0.32
POLR2J3-219ENST00000608621 UBE2Q2LH0YL09 131 aa17.03■□□□□ 0.32
POLR2J3-219ENST00000608621 TAF5LO75529 589 aa17.03■□□□□ 0.32
POLR2J3-219ENST00000608621 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
POLR2J3-219ENST00000608621 RASAL3Q86YV0 1011 aa17.03■□□□□ 0.32
POLR2J3-219ENST00000608621 KIAA0825Q8IV33 1275 aa17.03■□□□□ 0.32
POLR2J3-219ENST00000608621 CD209Q9NNX6 404 aa17.03■□□□□ 0.32
POLR2J3-219ENST00000608621 MMP14P50281 582 aa17.02■□□□□ 0.32
POLR2J3-219ENST00000608621 IFIT5Q13325 482 aaKnown RBP17.02■□□□□ 0.32
POLR2J3-219ENST00000608621 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
POLR2J3-219ENST00000608621 HDAC9Q9UKV0 1011 aa17.02■□□□□ 0.32
POLR2J3-219ENST00000608621 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
POLR2J3-219ENST00000608621 SASH1O94885 1247 aa17.01■□□□□ 0.31
POLR2J3-219ENST00000608621 TTLL12Q14166 644 aaPredicted RBP17.01■□□□□ 0.31
POLR2J3-219ENST00000608621 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
POLR2J3-219ENST00000608621 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
POLR2J3-219ENST00000608621 AKAP11Q9UKA4 1901 aa17.01■□□□□ 0.31
POLR2J3-219ENST00000608621 ZNF646O15015 1829 aaPredicted RBP17■□□□□ 0.31
POLR2J3-219ENST00000608621 RGS19P49795 217 aa17■□□□□ 0.31
POLR2J3-219ENST00000608621 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
POLR2J3-219ENST00000608621 ZNF594Q96JF6 807 aaPredicted RBP17■□□□□ 0.31
POLR2J3-219ENST00000608621 PAPPA2Q9BXP8 1791 aa17■□□□□ 0.31
POLR2J3-219ENST00000608621 IRS2Q9Y4H2 1338 aa16.99■□□□□ 0.31
POLR2J3-219ENST00000608621 NF2P35240 595 aa16.99■□□□□ 0.31
POLR2J3-219ENST00000608621 C15orf52Q6ZUT6 534 aaKnown RBP16.99■□□□□ 0.31
POLR2J3-219ENST00000608621 ZBED3Q96IU2 234 aaPredicted RBP16.99■□□□□ 0.31
POLR2J3-219ENST00000608621 GRM8O00222 908 aa16.98■□□□□ 0.31
POLR2J3-219ENST00000608621 PLIN1O60240 522 aa16.98■□□□□ 0.31
POLR2J3-219ENST00000608621 MLLT1Q03111 559 aaPredicted RBP16.98■□□□□ 0.31
POLR2J3-219ENST00000608621 PRKG1Q13976 671 aa16.98■□□□□ 0.31
POLR2J3-219ENST00000608621 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
POLR2J3-219ENST00000608621 LDHAL6AQ6ZMR3 332 aa16.98■□□□□ 0.31
POLR2J3-219ENST00000608621 CERS5Q8N5B7 392 aa16.98■□□□□ 0.31
POLR2J3-219ENST00000608621 C9orf78Q9NZ63 289 aaPredicted RBP16.98■□□□□ 0.31
POLR2J3-219ENST00000608621 DLGAP5Q15398 846 aa16.97■□□□□ 0.31
POLR2J3-219ENST00000608621 TAF7LQ5H9L4 462 aa16.97■□□□□ 0.31
POLR2J3-219ENST00000608621 SLC4A10Q6U841 1118 aa16.97■□□□□ 0.31
POLR2J3-219ENST00000608621 ZNF804AQ7Z570 1209 aa16.97■□□□□ 0.31
POLR2J3-219ENST00000608621 APOBEC3FQ8IUX4 373 aaKnown RBP16.97■□□□□ 0.31
POLR2J3-219ENST00000608621 ALDH1L1O75891 902 aa16.96■□□□□ 0.31
POLR2J3-219ENST00000608621 IL1R1P14778 569 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms