RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 H7C1D1 291 aa18.19■□□□□ 0.5
HDDC2-204ENST00000608295 USP50Q70EL3 339 aaPredicted RBP18.19■□□□□ 0.5
HDDC2-204ENST00000608295 TRPM7Q96QT4 1865 aa18.18■□□□□ 0.5
HDDC2-204ENST00000608295 TRIM27P14373 513 aa18.18■□□□□ 0.5
HDDC2-204ENST00000608295 HIRAP54198 1017 aaPredicted RBP18.18■□□□□ 0.5
HDDC2-204ENST00000608295 RABL6Q3YEC7 729 aaPredicted RBP18.18■□□□□ 0.5
HDDC2-204ENST00000608295 LRRC24Q50LG9 513 aa18.18■□□□□ 0.5
HDDC2-204ENST00000608295 MKRN1Q9UHC7 482 aaKnown RBP18.18■□□□□ 0.5
HDDC2-204ENST00000608295 LRRFIP2Q9Y608 721 aaKnown RBP18.18■□□□□ 0.5
HDDC2-204ENST00000608295 PASKQ96RG2 1323 aa18.18■□□□□ 0.5
HDDC2-204ENST00000608295 USP17L3A6NCW0 530 aa18.17■□□□□ 0.5
HDDC2-204ENST00000608295 USP17L4A6NCW7 530 aa18.17■□□□□ 0.5
HDDC2-204ENST00000608295 ITGBL1O95965 494 aaPredicted RBP18.17■□□□□ 0.5
HDDC2-204ENST00000608295 RSBN1LQ6PCB5 846 aaPredicted RBP18.17■□□□□ 0.5
HDDC2-204ENST00000608295 DLK2Q6UY11 383 aa18.17■□□□□ 0.5
HDDC2-204ENST00000608295 USP17L1Q7RTZ2 530 aa18.17■□□□□ 0.5
HDDC2-204ENST00000608295 GLIS2Q9BZE0 524 aaPredicted RBP18.17■□□□□ 0.5
HDDC2-204ENST00000608295 ZNF408Q9H9D4 720 aa18.17■□□□□ 0.5
HDDC2-204ENST00000608295 ASTN2O75129 1339 aaPredicted RBP18.17■□□□□ 0.5
HDDC2-204ENST00000608295 POLR2AP24928 1970 aaKnown RBP18.17■□□□□ 0.5
HDDC2-204ENST00000608295 VIL1P09327 827 aaKnown RBP18.16■□□□□ 0.5
HDDC2-204ENST00000608295 KIF4BQ2VIQ3 1234 aa18.16■□□□□ 0.5
HDDC2-204ENST00000608295 METTL24Q5JXM2 366 aa18.16■□□□□ 0.5
HDDC2-204ENST00000608295 COA1Q9GZY4 146 aa18.16■□□□□ 0.5
HDDC2-204ENST00000608295 SIL1Q9H173 461 aa18.16■□□□□ 0.5
HDDC2-204ENST00000608295 RPS12P25398 132 aaKnown RBP18.15■□□□□ 0.5
HDDC2-204ENST00000608295 BRPF1P55201 1214 aaPredicted RBP18.15■□□□□ 0.5
HDDC2-204ENST00000608295 GTF2IP78347 998 aa18.15■□□□□ 0.5
HDDC2-204ENST00000608295 ATF7IPQ6VMQ6 1270 aa18.15■□□□□ 0.5
HDDC2-204ENST00000608295 PODNQ7Z5L7 613 aa18.15■□□□□ 0.5
HDDC2-204ENST00000608295 SCAF8Q9UPN6 1271 aaKnown RBP18.15■□□□□ 0.5
HDDC2-204ENST00000608295 ZKSCAN2Q63HK3 967 aa18.14■□□□□ 0.49
HDDC2-204ENST00000608295 DNAJC5GQ8N7S2 189 aa18.14■□□□□ 0.49
HDDC2-204ENST00000608295 KLRG1Q96E93 195 aa18.14■□□□□ 0.49
HDDC2-204ENST00000608295 ABT1Q9ULW3 272 aaKnown RBP18.14■□□□□ 0.49
HDDC2-204ENST00000608295 IRS2Q9Y4H2 1338 aa18.14■□□□□ 0.49
HDDC2-204ENST00000608295 IPO8O15397 1037 aaKnown RBP18.13■□□□□ 0.49
HDDC2-204ENST00000608295 GYG1P46976 350 aa18.13■□□□□ 0.49
HDDC2-204ENST00000608295 GRM1Q13255 1194 aa18.13■□□□□ 0.49
HDDC2-204ENST00000608295 DACT2Q5SW24 774 aa18.13■□□□□ 0.49
HDDC2-204ENST00000608295 ZNF804AQ7Z570 1209 aa18.13■□□□□ 0.49
HDDC2-204ENST00000608295 TMEM57Q8N5G2 664 aa18.13■□□□□ 0.49
HDDC2-204ENST00000608295 DPF2Q92785 391 aa18.13■□□□□ 0.49
HDDC2-204ENST00000608295 CD209Q9NNX6 404 aa18.13■□□□□ 0.49
HDDC2-204ENST00000608295 CREBZFQ9NS37 354 aa18.13■□□□□ 0.49
HDDC2-204ENST00000608295 GGA3Q9NZ52 723 aa18.13■□□□□ 0.49
HDDC2-204ENST00000608295 IQSEC3Q9UPP2 1182 aaPredicted RBP18.13■□□□□ 0.49
HDDC2-204ENST00000608295 MYH13Q9UKX3 1938 aa18.13■□□□□ 0.49
HDDC2-204ENST00000608295 TMEM88BA6NKF7 163 aa18.12■□□□□ 0.49
HDDC2-204ENST00000608295 ADM5C9JUS6 153 aa18.12■□□□□ 0.49
HDDC2-204ENST00000608295 F8W031 263 aaPredicted RBP18.12■□□□□ 0.49
HDDC2-204ENST00000608295 PAXIP1Q6ZW49 1069 aaPredicted RBP18.12■□□□□ 0.49
HDDC2-204ENST00000608295 KIAA0825Q8IV33 1275 aa18.12■□□□□ 0.49
HDDC2-204ENST00000608295 AGBL3Q8NEM8 1001 aa18.12■□□□□ 0.49
HDDC2-204ENST00000608295 PA2G4Q9UQ80 394 aaKnown RBP18.12■□□□□ 0.49
HDDC2-204ENST00000608295 SASH1O94885 1247 aa18.11■□□□□ 0.49
HDDC2-204ENST00000608295 USP17L8P0C7I0 530 aa18.11■□□□□ 0.49
HDDC2-204ENST00000608295 RFX5P48382 616 aaPredicted RBP18.11■□□□□ 0.49
HDDC2-204ENST00000608295 INTS3Q68E01 1043 aaKnown RBP18.11■□□□□ 0.49
HDDC2-204ENST00000608295 TTLL5Q6EMB2 1281 aa18.11■□□□□ 0.49
HDDC2-204ENST00000608295 USP48Q86UV5 1035 aa18.11■□□□□ 0.49
HDDC2-204ENST00000608295 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
HDDC2-204ENST00000608295 ARHGAP45Q92619 1136 aa18.11■□□□□ 0.49
HDDC2-204ENST00000608295 RIPOR2Q9Y4F9 1068 aa18.11■□□□□ 0.49
HDDC2-204ENST00000608295 MROH5Q6ZUA9 1318 aa18.11■□□□□ 0.49
HDDC2-204ENST00000608295 ARAP2Q8WZ64 1704 aa18.11■□□□□ 0.49
HDDC2-204ENST00000608295 STRIP1Q5VSL9 837 aa18.1■□□□□ 0.49
HDDC2-204ENST00000608295 GMLQ99445 158 aa18.1■□□□□ 0.49
HDDC2-204ENST00000608295 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
HDDC2-204ENST00000608295 MYOZ2Q9NPC6 264 aa18.1■□□□□ 0.49
HDDC2-204ENST00000608295 CELF2O95319 508 aaKnown RBP18.09■□□□□ 0.49
HDDC2-204ENST00000608295 RLBP1P12271 317 aa18.09■□□□□ 0.49
HDDC2-204ENST00000608295 PTPN12Q05209 780 aaKnown RBP18.09■□□□□ 0.49
HDDC2-204ENST00000608295 CHAF1AQ13111 956 aaPredicted RBP18.09■□□□□ 0.49
HDDC2-204ENST00000608295 ANGEL2Q5VTE6 544 aaKnown RBP18.09■□□□□ 0.49
HDDC2-204ENST00000608295 KRT26Q7Z3Y9 468 aa18.09■□□□□ 0.49
HDDC2-204ENST00000608295 ITPRIPQ8IWB1 547 aa18.09■□□□□ 0.49
HDDC2-204ENST00000608295 CERS5Q8N5B7 392 aa18.09■□□□□ 0.49
HDDC2-204ENST00000608295 ZNF609O15014 1411 aa18.08■□□□□ 0.49
HDDC2-204ENST00000608295 CNTNAP1P78357 1384 aa18.08■□□□□ 0.49
HDDC2-204ENST00000608295 EYA2O00167 538 aa18.08■□□□□ 0.48
HDDC2-204ENST00000608295 UBE4AQ14139 1066 aa18.08■□□□□ 0.48
HDDC2-204ENST00000608295 SCARF1Q14162 830 aa18.08■□□□□ 0.48
HDDC2-204ENST00000608295 VGLL2Q8N8G2 317 aa18.08■□□□□ 0.48
HDDC2-204ENST00000608295 DCPSQ96C86 337 aaKnown RBP18.08■□□□□ 0.48
HDDC2-204ENST00000608295 YTHDC1Q96MU7 727 aaKnown RBP18.08■□□□□ 0.48
HDDC2-204ENST00000608295 SRGAP3O43295 1099 aa18.07■□□□□ 0.48
HDDC2-204ENST00000608295 GNAI3P08754 354 aa18.07■□□□□ 0.48
HDDC2-204ENST00000608295 ZNF280AP59817 542 aaPredicted RBP18.07■□□□□ 0.48
HDDC2-204ENST00000608295 NBPF9Q3BBW0 867 aa18.07■□□□□ 0.48
HDDC2-204ENST00000608295 CST9Q5W186 159 aa18.07■□□□□ 0.48
HDDC2-204ENST00000608295 C15orf52Q6ZUT6 534 aaKnown RBP18.07■□□□□ 0.48
HDDC2-204ENST00000608295 VPS37DQ86XT2 251 aa18.07■□□□□ 0.48
HDDC2-204ENST00000608295 MYO3BQ8WXR4 1341 aa18.06■□□□□ 0.48
HDDC2-204ENST00000608295 PDE8BO95263 885 aa18.06■□□□□ 0.48
HDDC2-204ENST00000608295 HIBADHP31937 336 aaKnown RBP18.06■□□□□ 0.48
HDDC2-204ENST00000608295 CDC37L1Q7L3B6 337 aa18.06■□□□□ 0.48
HDDC2-204ENST00000608295 ATG9AQ7Z3C6 839 aa18.06■□□□□ 0.48
HDDC2-204ENST00000608295 OGFOD1Q8N543 542 aa18.06■□□□□ 0.48
HDDC2-204ENST00000608295 ZC3H15Q8WU90 426 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms