RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 KCNJ4P48050 445 aa19.01■□□□□ 0.63
CTSA-216ENST00000607212 CCT4P50991 539 aaKnown RBP19.01■□□□□ 0.63
CTSA-216ENST00000607212 MPHOSPH8Q99549 860 aa19.01■□□□□ 0.63
CTSA-216ENST00000607212 SALL2Q9Y467 1007 aaPredicted RBP19.01■□□□□ 0.63
CTSA-216ENST00000607212 MED23Q9ULK4 1368 aa19.01■□□□□ 0.63
CTSA-216ENST00000607212 SLC10A3P09131 477 aa19■□□□□ 0.63
CTSA-216ENST00000607212 FKBP5Q13451 457 aaPredicted RBP19■□□□□ 0.63
CTSA-216ENST00000607212 G2E3Q7L622 706 aa19■□□□□ 0.63
CTSA-216ENST00000607212 WWC1Q8IX03 1113 aa18.99■□□□□ 0.63
CTSA-216ENST00000607212 MXD3Q9BW11 206 aa18.99■□□□□ 0.63
CTSA-216ENST00000607212 MYH16Q9H6N6 1097 aa18.99■□□□□ 0.63
CTSA-216ENST00000607212 RNF186Q9NXI6 227 aa18.99■□□□□ 0.63
CTSA-216ENST00000607212 SAGE1Q9NXZ1 904 aa18.99■□□□□ 0.63
CTSA-216ENST00000607212 CHMP3Q9Y3E7 222 aa18.99■□□□□ 0.63
CTSA-216ENST00000607212 WTIPA6NIX2 430 aaPredicted RBP18.98■□□□□ 0.63
CTSA-216ENST00000607212 ITGA6P23229 1130 aa18.98■□□□□ 0.63
CTSA-216ENST00000607212 NF2P35240 595 aa18.98■□□□□ 0.63
CTSA-216ENST00000607212 CCDC184Q52MB2 194 aa18.98■□□□□ 0.63
CTSA-216ENST00000607212 PRAMEF18Q5VWM3 479 aa18.98■□□□□ 0.63
CTSA-216ENST00000607212 RASAL3Q86YV0 1011 aa18.98■□□□□ 0.63
CTSA-216ENST00000607212 COA1Q9GZY4 146 aa18.98■□□□□ 0.63
CTSA-216ENST00000607212 PAPPA2Q9BXP8 1791 aa18.98■□□□□ 0.63
CTSA-216ENST00000607212 MYO3BQ8WXR4 1341 aa18.98■□□□□ 0.63
CTSA-216ENST00000607212 PITPNM2Q9BZ72 1349 aa18.98■□□□□ 0.63
CTSA-216ENST00000607212 FKBP1BP68106 108 aa18.97■□□□□ 0.63
CTSA-216ENST00000607212 FLIIQ13045 1269 aa18.97■□□□□ 0.63
CTSA-216ENST00000607212 CCDC27Q2M243 656 aa18.97■□□□□ 0.63
CTSA-216ENST00000607212 NBPF9Q3BBW0 867 aa18.97■□□□□ 0.63
CTSA-216ENST00000607212 GMLQ99445 158 aa18.97■□□□□ 0.63
CTSA-216ENST00000607212 ANKRD2Q9GZV1 360 aa18.97■□□□□ 0.63
CTSA-216ENST00000607212 HDAC9Q9UKV0 1011 aa18.97■□□□□ 0.63
CTSA-216ENST00000607212 LEMD3Q9Y2U8 911 aa18.97■□□□□ 0.63
CTSA-216ENST00000607212 ZNF609O15014 1411 aa18.97■□□□□ 0.63
CTSA-216ENST00000607212 ZNF804BA4D1E1 1349 aa18.97■□□□□ 0.63
CTSA-216ENST00000607212 UBE2Q2LH0YL09 131 aa18.96■□□□□ 0.63
CTSA-216ENST00000607212 H7C1W4 665 aa18.96■□□□□ 0.63
CTSA-216ENST00000607212 GCKRQ14397 625 aa18.96■□□□□ 0.63
CTSA-216ENST00000607212 MOB2Q70IA6 237 aa18.96■□□□□ 0.63
CTSA-216ENST00000607212 DNAAF4Q8WXU2 420 aa18.96■□□□□ 0.63
CTSA-216ENST00000607212 MRS2Q9HD23 443 aa18.96■□□□□ 0.63
CTSA-216ENST00000607212 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.96■□□□□ 0.63
CTSA-216ENST00000607212 SASH1O94885 1247 aa18.95■□□□□ 0.62
CTSA-216ENST00000607212 DACT2Q5SW24 774 aa18.95■□□□□ 0.62
CTSA-216ENST00000607212 STRIP1Q5VSL9 837 aa18.95■□□□□ 0.62
CTSA-216ENST00000607212 TTLL5Q6EMB2 1281 aa18.95■□□□□ 0.62
CTSA-216ENST00000607212 REM2Q8IYK8 340 aaPredicted RBP18.95■□□□□ 0.62
CTSA-216ENST00000607212 CSRNP1Q96S65 589 aa18.95■□□□□ 0.62
CTSA-216ENST00000607212 CACNA1FO60840 1977 aa18.95■□□□□ 0.62
CTSA-216ENST00000607212 ANKRD18BA2A2Z9 1011 aa18.94■□□□□ 0.62
CTSA-216ENST00000607212 MKRN3Q13064 507 aaKnown RBP18.94■□□□□ 0.62
CTSA-216ENST00000607212 PRKG1Q13976 671 aa18.94■□□□□ 0.62
CTSA-216ENST00000607212 KIAA0825Q8IV33 1275 aa18.94■□□□□ 0.62
CTSA-216ENST00000607212 IL16Q14005 1332 aa18.94■□□□□ 0.62
CTSA-216ENST00000607212 GTF2IP78347 998 aa18.93■□□□□ 0.62
CTSA-216ENST00000607212 TXNRD3Q86VQ6 643 aa18.93■□□□□ 0.62
CTSA-216ENST00000607212 FANCIQ9NVI1 1328 aa18.93■□□□□ 0.62
CTSA-216ENST00000607212 WNT10BO00744 389 aa18.92■□□□□ 0.62
CTSA-216ENST00000607212 KLRK1P26718 216 aa18.92■□□□□ 0.62
CTSA-216ENST00000607212 CHRNDQ07001 517 aa18.92■□□□□ 0.62
CTSA-216ENST00000607212 TAF7LQ5H9L4 462 aa18.92■□□□□ 0.62
CTSA-216ENST00000607212 LINS1Q8NG48 757 aa18.92■□□□□ 0.62
CTSA-216ENST00000607212 PLA2G12BQ9BX93 195 aa18.92■□□□□ 0.62
CTSA-216ENST00000607212 ANP32CO43423 234 aa18.91■□□□□ 0.62
CTSA-216ENST00000607212 IFIT5Q13325 482 aaKnown RBP18.91■□□□□ 0.62
CTSA-216ENST00000607212 ARMC9Q7Z3E5 817 aa18.91■□□□□ 0.62
CTSA-216ENST00000607212 APOBEC3FQ8IUX4 373 aaKnown RBP18.91■□□□□ 0.62
CTSA-216ENST00000607212 RGS19P49795 217 aa18.9■□□□□ 0.62
CTSA-216ENST00000607212 EXOSC9Q06265 439 aaKnown RBP18.9■□□□□ 0.62
CTSA-216ENST00000607212 HELBQ8NG08 1087 aaPredicted RBP18.9■□□□□ 0.62
CTSA-216ENST00000607212 ZNF646O15015 1829 aaPredicted RBP18.89■□□□□ 0.61
CTSA-216ENST00000607212 F8W031 263 aaPredicted RBP18.89■□□□□ 0.61
CTSA-216ENST00000607212 PLIN1O60240 522 aa18.89■□□□□ 0.61
CTSA-216ENST00000607212 TAF5LO75529 589 aa18.89■□□□□ 0.61
CTSA-216ENST00000607212 SOX10P56693 466 aa18.89■□□□□ 0.61
CTSA-216ENST00000607212 CTU1Q7Z7A3 348 aaKnown RBP18.89■□□□□ 0.61
CTSA-216ENST00000607212 F6X3S4 739 aa18.88■□□□□ 0.61
CTSA-216ENST00000607212 TBC1D8O95759 1140 aa18.88■□□□□ 0.61
CTSA-216ENST00000607212 CSF1RP07333 972 aa18.88■□□□□ 0.61
CTSA-216ENST00000607212 MMP14P50281 582 aa18.88■□□□□ 0.61
CTSA-216ENST00000607212 DLGAP5Q15398 846 aa18.88■□□□□ 0.61
CTSA-216ENST00000607212 ZNF804AQ7Z570 1209 aa18.88■□□□□ 0.61
CTSA-216ENST00000607212 CD209Q9NNX6 404 aa18.88■□□□□ 0.61
CTSA-216ENST00000607212 VAMP4O75379 141 aa18.87■□□□□ 0.61
CTSA-216ENST00000607212 CASP7P55210 303 aa18.87■□□□□ 0.61
CTSA-216ENST00000607212 CNNM1Q9NRU3 951 aa18.87■□□□□ 0.61
CTSA-216ENST00000607212 ANGEL1Q9UNK9 670 aaKnown RBP18.87■□□□□ 0.61
CTSA-216ENST00000607212 SNAP23O00161 211 aa18.86■□□□□ 0.61
CTSA-216ENST00000607212 MYO1BO43795 1136 aa18.86■□□□□ 0.61
CTSA-216ENST00000607212 RBM5P52756 815 aaKnown RBP eCLIP18.86■□□□□ 0.61
CTSA-216ENST00000607212 SREBF2Q12772 1141 aa18.86■□□□□ 0.61
CTSA-216ENST00000607212 CCDC57Q2TAC2 916 aa18.86■□□□□ 0.61
CTSA-216ENST00000607212 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
CTSA-216ENST00000607212 C9orf78Q9NZ63 289 aaPredicted RBP18.86■□□□□ 0.61
CTSA-216ENST00000607212 JAG2Q9Y219 1238 aa18.86■□□□□ 0.61
CTSA-216ENST00000607212 SLC4A10Q6U841 1118 aa18.85■□□□□ 0.61
CTSA-216ENST00000607212 VEZTQ9HBM0 779 aa18.85■□□□□ 0.61
CTSA-216ENST00000607212 PTPN12Q05209 780 aaKnown RBP18.84■□□□□ 0.61
CTSA-216ENST00000607212 LMBR1LQ6UX01 489 aa18.84■□□□□ 0.61
CTSA-216ENST00000607212 A0A1B0GUL6 1792 aa18.83■□□□□ 0.61
CTSA-216ENST00000607212 CLRN2A0PK11 232 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms