RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	NOM1	Q5C9Z4	860 aa	Known RBP	7.85	□□□□□ -1.15
LAMA4-222	ENST00000604740	C1orf127	Q8N9H9	656 aa		7.85	□□□□□ -1.15
LAMA4-222	ENST00000604740	KLHL23	Q8NBE8	558 aa		7.85	□□□□□ -1.15
LAMA4-222	ENST00000604740	POP1	Q99575	1024 aa	Known RBP	7.85	□□□□□ -1.15
LAMA4-222	ENST00000604740	PDGFA	P04085	211 aa		7.84	□□□□□ -1.15
LAMA4-222	ENST00000604740	ACPP	P15309	386 aa		7.84	□□□□□ -1.15
LAMA4-222	ENST00000604740	CES1	P23141	567 aa		7.84	□□□□□ -1.15
LAMA4-222	ENST00000604740	DUOXA2	Q1HG44	320 aa		7.84	□□□□□ -1.15
LAMA4-222	ENST00000604740	CCDC82	Q8N4S0	544 aa		7.84	□□□□□ -1.15
LAMA4-222	ENST00000604740	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.84	□□□□□ -1.15
LAMA4-222	ENST00000604740	UBL7	Q96S82	380 aa	Predicted RBP	7.84	□□□□□ -1.15
LAMA4-222	ENST00000604740	CEP41	Q9BYV8	373 aa		7.84	□□□□□ -1.15
LAMA4-222	ENST00000604740	RAX	Q9Y2V3	346 aa		7.84	□□□□□ -1.15
LAMA4-222	ENST00000604740	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	7.84	□□□□□ -1.15
LAMA4-222	ENST00000604740	EIF1AX	P47813	144 aa	Known RBP	7.83	□□□□□ -1.16
LAMA4-222	ENST00000604740	CABP4	P57796	275 aa		7.83	□□□□□ -1.16
LAMA4-222	ENST00000604740	MTMR3	Q13615	1198 aa		7.83	□□□□□ -1.16
LAMA4-222	ENST00000604740	UBASH3B	Q8TF42	649 aa		7.83	□□□□□ -1.16
LAMA4-222	ENST00000604740	ADAM19	Q9H013	955 aa		7.83	□□□□□ -1.16
LAMA4-222	ENST00000604740	GGNBP2	Q9H3C7	697 aa		7.83	□□□□□ -1.16
LAMA4-222	ENST00000604740	SEC31B	Q9NQW1	1179 aa		7.83	□□□□□ -1.16
LAMA4-222	ENST00000604740	SALL4	Q9UJQ4	1053 aa		7.83	□□□□□ -1.16
LAMA4-222	ENST00000604740		H3BRJ5	948 aa		7.82	□□□□□ -1.16
LAMA4-222	ENST00000604740	TM4SF5	O14894	197 aa		7.82	□□□□□ -1.16
LAMA4-222	ENST00000604740	DDX3Y	O15523	660 aa	Known RBP	7.82	□□□□□ -1.16
LAMA4-222	ENST00000604740	DHX15	O43143	795 aa	Known RBP	7.82	□□□□□ -1.16
LAMA4-222	ENST00000604740	MZF1	P28698	734 aa	Predicted RBP	7.82	□□□□□ -1.16
LAMA4-222	ENST00000604740	XKR5	Q6UX68	686 aa		7.82	□□□□□ -1.16
LAMA4-222	ENST00000604740	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.82	□□□□□ -1.16
LAMA4-222	ENST00000604740	UTP4	Q969X6	686 aa	Known RBP	7.82	□□□□□ -1.16
LAMA4-222	ENST00000604740	STOML1	Q9UBI4	398 aa		7.82	□□□□□ -1.16
LAMA4-222	ENST00000604740	TMEM88B	A6NKF7	163 aa		7.81	□□□□□ -1.16
LAMA4-222	ENST00000604740	ADAM11	O75078	769 aa		7.81	□□□□□ -1.16
LAMA4-222	ENST00000604740	TRPA1	O75762	1119 aa		7.81	□□□□□ -1.16
LAMA4-222	ENST00000604740	AAMP	Q13685	434 aa		7.81	□□□□□ -1.16
LAMA4-222	ENST00000604740	KIAA1211	Q6ZU35	1233 aa		7.81	□□□□□ -1.16
LAMA4-222	ENST00000604740	SLC51A	Q86UW1	340 aa		7.81	□□□□□ -1.16
LAMA4-222	ENST00000604740	ARMC10	Q8N2F6	343 aa		7.81	□□□□□ -1.16
LAMA4-222	ENST00000604740	KLHDC7B	Q96G42	594 aa		7.81	□□□□□ -1.16
LAMA4-222	ENST00000604740	PCMTD2	Q9NV79	361 aa		7.81	□□□□□ -1.16
LAMA4-222	ENST00000604740	POLI	Q9UNA4	740 aa		7.81	□□□□□ -1.16
LAMA4-222	ENST00000604740	PDE2A	O00408	941 aa	Predicted RBP	7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	GSC2	O15499	205 aa		7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	SSFA2	P28290	1259 aa		7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	SSTR4	P31391	388 aa		7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	PIP4K2B	P78356	416 aa		7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	UVSSA	Q2YD98	709 aa		7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	ALKBH2	Q6NS38	261 aa		7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	SLC7A3	Q8WY07	619 aa		7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	HHIP	Q96QV1	700 aa		7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	DZANK1	Q9NVP4	752 aa		7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	GTF3C3	Q9Y5Q9	886 aa		7.8	□□□□□ -1.16
LAMA4-222	ENST00000604740	NFKBIE	O00221	500 aa		7.79	□□□□□ -1.16
LAMA4-222	ENST00000604740	IGLV1-40	P01703	118 aa		7.79	□□□□□ -1.16
LAMA4-222	ENST00000604740	NLRP12	P59046	1061 aa		7.79	□□□□□ -1.16
LAMA4-222	ENST00000604740	WNT8B	Q93098	351 aa		7.79	□□□□□ -1.16
LAMA4-222	ENST00000604740	PMEPA1	Q969W9	287 aa		7.79	□□□□□ -1.16
LAMA4-222	ENST00000604740	CHRD	Q9H2X0	955 aa		7.79	□□□□□ -1.16
LAMA4-222	ENST00000604740	PPP1R15A	O75807	674 aa	Predicted RBP	7.78	□□□□□ -1.16
LAMA4-222	ENST00000604740	FAM46A	Q96IP4	442 aa	Known RBP	7.78	□□□□□ -1.16
LAMA4-222	ENST00000604740	OSGEP	Q9NPF4	335 aa		7.78	□□□□□ -1.16
LAMA4-222	ENST00000604740	EREG	O14944	169 aa		7.77	□□□□□ -1.17
LAMA4-222	ENST00000604740	SART1	O43290	800 aa	Known RBP	7.77	□□□□□ -1.17
LAMA4-222	ENST00000604740	PHACTR2	O75167	634 aa		7.77	□□□□□ -1.17
LAMA4-222	ENST00000604740	MYRFL	Q96LU7	910 aa		7.77	□□□□□ -1.17
LAMA4-222	ENST00000604740	OSMR	Q99650	979 aa		7.77	□□□□□ -1.17
LAMA4-222	ENST00000604740	MTMR7	Q9Y216	660 aa		7.77	□□□□□ -1.17
LAMA4-222	ENST00000604740	TNFRSF21	O75509	655 aa		7.76	□□□□□ -1.17
LAMA4-222	ENST00000604740	ARL4D	P49703	201 aa		7.76	□□□□□ -1.17
LAMA4-222	ENST00000604740	TMEM102	Q8N9M5	508 aa	Predicted RBP	7.76	□□□□□ -1.17
LAMA4-222	ENST00000604740	SNX29	Q8TEQ0	813 aa		7.76	□□□□□ -1.17
LAMA4-222	ENST00000604740	ZKSCAN3	Q9BRR0	538 aa		7.76	□□□□□ -1.17
LAMA4-222	ENST00000604740	RNF208	Q9H0X6	261 aa		7.76	□□□□□ -1.17
LAMA4-222	ENST00000604740	C7orf69	Q9H7B7	122 aa		7.76	□□□□□ -1.17
LAMA4-222	ENST00000604740	FOXD3	Q9UJU5	478 aa	Predicted RBP	7.76	□□□□□ -1.17
LAMA4-222	ENST00000604740	SOX13	Q9UN79	622 aa		7.76	□□□□□ -1.17
LAMA4-222	ENST00000604740	HMX2	A2RU54	273 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	CARNS1	A5YM72	827 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	FAM13A	O94988	1023 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	ABL1	P00519	1130 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	TGFB1	P01137	390 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	CD97	P48960	835 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	EHHADH	Q08426	723 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	C19orf57	Q0VDD7	668 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	NFIA	Q12857	509 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	ANKRD34A	Q69YU3	496 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	FDX2	Q6P4F2	183 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	TRIM42	Q8IWZ5	723 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	RUSC1	Q9BVN2	902 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	KCNF1	Q9H3M0	494 aa		7.75	□□□□□ -1.17
LAMA4-222	ENST00000604740	EDN3	P14138	238 aa		7.74	□□□□□ -1.17
LAMA4-222	ENST00000604740	NPR3	P17342	541 aa		7.74	□□□□□ -1.17
LAMA4-222	ENST00000604740	USP5	P45974	858 aa		7.74	□□□□□ -1.17
LAMA4-222	ENST00000604740	PREP	P48147	710 aa		7.74	□□□□□ -1.17
LAMA4-222	ENST00000604740	HGSNAT	Q68CP4	663 aa		7.74	□□□□□ -1.17
LAMA4-222	ENST00000604740	ASAP3	Q8TDY4	903 aa		7.74	□□□□□ -1.17
LAMA4-222	ENST00000604740	BSND	Q8WZ55	320 aa		7.74	□□□□□ -1.17
LAMA4-222	ENST00000604740	NXPE3	Q969Y0	559 aa		7.74	□□□□□ -1.17
LAMA4-222	ENST00000604740	C1orf115	Q9H7X2	142 aa		7.74	□□□□□ -1.17
LAMA4-222	ENST00000604740	ANO2	Q9NQ90	1003 aa		7.74	□□□□□ -1.17

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