RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 CCDC39Q9UFE4 941 aa13.94□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 TOGARAM1Q9Y4F4 1720 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 CSF1RP07333 972 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 NLRP10Q86W26 655 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 NSUN7Q8NE18 718 aaKnown RBP13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 PGBD1Q96JS3 809 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 MAP3K15Q6ZN16 1313 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 KDM4FA0A1W2PPD8 638 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 AP5Z1O43299 807 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 PFKFB2O60825 505 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 METTL24Q5JXM2 366 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 RAB11FIP4Q86YS3 637 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 TTLL11Q8NHH1 800 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 STRCQ7RTU9 1775 aa13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 RESTQ13127 1097 aa13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 SCAND2PQ9GZW5 306 aaPredicted RBP13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 PTPDC1A2A3K4 754 aa13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 FAM177BA6PVY3 158 aa13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 FGAP02671 866 aa13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 HMGB1P09429 215 aaKnown RBP13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 TEX13AQ9BXU3 409 aaPredicted RBP13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 TRMT112Q9UI30 125 aaKnown RBP13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 RIPOR2Q9Y4F9 1068 aa13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 NR1I2O75469 434 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 OFD1O75665 1012 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 CYP19A1P11511 503 aaPredicted RBP13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 ATP2B3Q16720 1220 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 HELBQ8NG08 1087 aaPredicted RBP13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 SMARCC2Q8TAQ2 1214 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 NUP62CLQ9H1M0 184 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 ELP1O95163 1332 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 PAPPAQ13219 1627 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 SNAP23O00161 211 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 IRS4O14654 1257 aaPredicted RBP13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 PDIA3P30101 505 aaKnown RBP13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 MCAMP43121 646 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 UVSSAQ2YD98 709 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 CNNM1Q9NRU3 951 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 ZNF500O60304 480 aaPredicted RBP13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 KDM4AO75164 1064 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 BICD2Q8TD16 824 aa13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 TTC12Q9H892 705 aaPredicted RBP13.91□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 LAMA4Q16363 1823 aa13.9□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 PDIA4P13667 645 aaKnown RBP13.9□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 PLA2G12BQ9BX93 195 aa13.9□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 DENND2AQ9ULE3 1009 aa13.9□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 MAP3K11Q16584 847 aa13.9□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 AGXT2Q9BYV1 514 aa13.9□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 TNMDQ9H2S6 317 aa13.9□□□□□ -0.18
HMGN3-AS1-201ENST00000604516 CTSWP56202 376 aa13.89□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 OTUD7BQ6GQQ9 843 aa13.89□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 R3HCC1Q9Y3T6 440 aaKnown RBP13.89□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ABCA3Q99758 1704 aa13.89□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 LUZP1Q86V48 1076 aa13.89□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 C17orf53Q8N3J3 647 aaPredicted RBP13.89□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 NKX2-3Q8TAU0 364 aa13.89□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 EXOC5O00471 708 aa13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 GPAA1O43292 621 aa13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ADD1P35611 737 aaKnown RBP13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 TYRO3Q06418 890 aa13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 MRVI1Q9Y6F6 885 aa13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ANKRD18BA2A2Z9 1011 aa13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 IDH1O75874 414 aaKnown RBP13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 DZIP3Q86Y13 1208 aaKnown RBP13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 LLPHQ9BRT6 129 aaKnown RBP13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 GJB4Q9NTQ9 266 aa13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 RIC1Q4ADV7 1423 aa13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 UBN2Q6ZU65 1347 aa13.88□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 FDPSP14324 419 aaKnown RBP13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 IMMTQ16891 758 aaKnown RBP13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 SLC9C2Q5TAH2 1124 aa13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 SPC24Q8NBT2 197 aa13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 APPBP2Q92624 585 aa13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 BCL9O00512 1426 aa13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 PHKA1P46020 1223 aa13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 USP28Q96RU2 1077 aa13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ACSBG1Q96GR2 724 aa13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 PIH1D3Q9NQM4 214 aaKnown RBP13.87□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 PRC1O43663 620 aa13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ZFYP08048 801 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ANO6Q4KMQ2 910 aa13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 VGLL2Q8N8G2 317 aa13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ZNF274Q96GC6 653 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 APPP05067 770 aa13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 MCM5P33992 734 aa13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ANTXR2P58335 489 aa13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 HMGN5P82970 282 aaKnown RBP13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 CTNNA3Q9UI47 895 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms