RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 STK3Q13188 491 aa17.94■□□□□ 0.46
CCDC12-211ENST00000604367 PUM3Q15397 648 aaKnown RBP17.94■□□□□ 0.46
CCDC12-211ENST00000604367 LRRFIP1Q32MZ4 808 aaKnown RBP17.94■□□□□ 0.46
CCDC12-211ENST00000604367 CCDC152Q4G0S7 254 aa17.94■□□□□ 0.46
CCDC12-211ENST00000604367 MEX3CQ5U5Q3 659 aaKnown RBP17.94■□□□□ 0.46
CCDC12-211ENST00000604367 CCDC102BQ68D86 513 aa17.94■□□□□ 0.46
CCDC12-211ENST00000604367 STOX1Q6ZVD7 989 aa17.94■□□□□ 0.46
CCDC12-211ENST00000604367 SPATA31A6Q5VVP1 1343 aa17.94■□□□□ 0.46
CCDC12-211ENST00000604367 FSD2A1L4K1 749 aa17.94■□□□□ 0.46
CCDC12-211ENST00000604367 STX6O43752 255 aa17.94■□□□□ 0.46
CCDC12-211ENST00000604367 L1TD1Q5T7N2 865 aaKnown RBP17.94■□□□□ 0.46
CCDC12-211ENST00000604367 LRRC2Q9BYS8 371 aa17.94■□□□□ 0.46
CCDC12-211ENST00000604367 COL5A3P25940 1745 aaPredicted RBP17.94■□□□□ 0.46
CCDC12-211ENST00000604367 TICAM2Q86XR7 235 aa17.93■□□□□ 0.46
CCDC12-211ENST00000604367 PUS7LQ9H0K6 701 aaKnown RBP17.93■□□□□ 0.46
CCDC12-211ENST00000604367 TTLL5Q6EMB2 1281 aa17.93■□□□□ 0.46
CCDC12-211ENST00000604367 CAVIN1Q6NZI2 390 aaKnown RBP17.93■□□□□ 0.46
CCDC12-211ENST00000604367 Q6ZUG5 572 aa17.93■□□□□ 0.46
CCDC12-211ENST00000604367 LPIN2Q92539 896 aa17.93■□□□□ 0.46
CCDC12-211ENST00000604367 CICQ96RK0 1608 aaPredicted RBP17.92■□□□□ 0.46
CCDC12-211ENST00000604367 ZFYP08048 801 aaPredicted RBP17.92■□□□□ 0.46
CCDC12-211ENST00000604367 GDPD2Q9HCC8 539 aa17.92■□□□□ 0.46
CCDC12-211ENST00000604367 ZSCAN22P10073 491 aaPredicted RBP17.92■□□□□ 0.46
CCDC12-211ENST00000604367 IGHMBP2P38935 993 aaKnown RBP17.92■□□□□ 0.46
CCDC12-211ENST00000604367 CLEC4GQ6UXB4 293 aa17.92■□□□□ 0.46
CCDC12-211ENST00000604367 GPT2Q8TD30 523 aa17.92■□□□□ 0.46
CCDC12-211ENST00000604367 ABCC12Q96J65 1359 aa17.92■□□□□ 0.46
CCDC12-211ENST00000604367 DDX60Q8IY21 1712 aaKnown RBP17.92■□□□□ 0.46
CCDC12-211ENST00000604367 IDH1O75874 414 aaKnown RBP17.91■□□□□ 0.46
CCDC12-211ENST00000604367 FGD1P98174 961 aa17.91■□□□□ 0.46
CCDC12-211ENST00000604367 ERFEQ4G0M1 354 aa17.91■□□□□ 0.46
CCDC12-211ENST00000604367 APPBP2Q92624 585 aa17.91■□□□□ 0.46
CCDC12-211ENST00000604367 ALDH8A1Q9H2A2 487 aaPredicted RBP17.91■□□□□ 0.46
CCDC12-211ENST00000604367 AKAP11Q9UKA4 1901 aa17.91■□□□□ 0.46
CCDC12-211ENST00000604367 XRCC6P12956 609 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC12-211ENST00000604367 HSP90B1P14625 803 aaKnown RBP17.91■□□□□ 0.46
CCDC12-211ENST00000604367 FGFR2P21802 821 aa17.91■□□□□ 0.46
CCDC12-211ENST00000604367 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.91■□□□□ 0.465e-10■■■□□ 17.1
CCDC12-211ENST00000604367 PIH1D3Q9NQM4 214 aaKnown RBP17.91■□□□□ 0.46
CCDC12-211ENST00000604367 SLC9C2Q5TAH2 1124 aa17.9■□□□□ 0.46
CCDC12-211ENST00000604367 GAS2L3Q86XJ1 694 aa17.9■□□□□ 0.46
CCDC12-211ENST00000604367 ZNF512BQ96KM6 892 aaPredicted RBP17.9■□□□□ 0.46
CCDC12-211ENST00000604367 CNTNAP4Q9C0A0 1308 aa17.9■□□□□ 0.46
CCDC12-211ENST00000604367 GNPATO15228 680 aa17.9■□□□□ 0.46
CCDC12-211ENST00000604367 SLC5A1P13866 664 aa17.9■□□□□ 0.46
CCDC12-211ENST00000604367 GTF2E1P29083 439 aaPredicted RBP17.9■□□□□ 0.46
CCDC12-211ENST00000604367 BRF1Q92994 677 aa17.9■□□□□ 0.46
CCDC12-211ENST00000604367 GJD4Q96KN9 370 aaPredicted RBP17.9■□□□□ 0.46
CCDC12-211ENST00000604367 SRP68Q9UHB9 627 aaKnown RBP17.9■□□□□ 0.46
CCDC12-211ENST00000604367 CCNL1Q9UK58 526 aaPredicted RBP17.9■□□□□ 0.46
CCDC12-211ENST00000604367 NSFL1CQ9UNZ2 370 aaKnown RBP17.9■□□□□ 0.46
CCDC12-211ENST00000604367 VPS37CA5D8V6 355 aaPredicted RBP17.89■□□□□ 0.45
CCDC12-211ENST00000604367 E7EWF7 191 aa17.89■□□□□ 0.45
CCDC12-211ENST00000604367 FOXP2O15409 715 aa17.89■□□□□ 0.45
CCDC12-211ENST00000604367 HAND2P61296 217 aa17.89■□□□□ 0.45
CCDC12-211ENST00000604367 TBC1D9BQ66K14 1250 aa17.89■□□□□ 0.45
CCDC12-211ENST00000604367 C3orf67Q6ZVT6 689 aa17.89■□□□□ 0.45
CCDC12-211ENST00000604367 LRP5O75197 1615 aa17.89■□□□□ 0.45
CCDC12-211ENST00000604367 GPAA1O43292 621 aa17.89■□□□□ 0.45
CCDC12-211ENST00000604367 ARID4AP29374 1257 aaPredicted RBP17.89■□□□□ 0.45
CCDC12-211ENST00000604367 TTF1Q15361 905 aaPredicted RBP17.89■□□□□ 0.45
CCDC12-211ENST00000604367 DHX32Q7L7V1 743 aaKnown RBP17.89■□□□□ 0.45
CCDC12-211ENST00000604367 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
CCDC12-211ENST00000604367 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
CCDC12-211ENST00000604367 TCHHQ07283 1943 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 F13A1P00488 732 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 UQCRFS1P1P0C7P4 283 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 HSPA1LP34931 641 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 BTAF1O14981 1849 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 FGAP02671 866 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 HMGB1P09429 215 aaKnown RBP17.88■□□□□ 0.45
CCDC12-211ENST00000604367 ADD2P35612 726 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 CHRNDQ07001 517 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 LARP1BQ659C4 914 aaKnown RBP17.88■□□□□ 0.45
CCDC12-211ENST00000604367 PANK2Q9BZ23 570 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 BCL2L12Q9HB09 334 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 MTMR6Q9Y217 621 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 BCORQ6W2J9 1755 aa17.88■□□□□ 0.45
CCDC12-211ENST00000604367 MYO5AQ9Y4I1 1855 aaKnown RBP17.87■□□□□ 0.45
CCDC12-211ENST00000604367 TPRNQ4KMQ1 711 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 ZSCAN25Q6NSZ9 544 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 SPATA5Q8NB90 893 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 GRPEL1Q9HAV7 217 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 AFF2P51816 1311 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 MYH7P12883 1935 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 LAMA4Q16363 1823 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 EP400Q96L91 3159 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 BCAMP50895 628 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 RASGRF1Q13972 1273 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 AMIGO3Q86WK7 504 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 CNPY2Q9Y2B0 182 aa17.87■□□□□ 0.45
CCDC12-211ENST00000604367 ZNF532Q9HCE3 1301 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 COL4A1P02462 1669 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 RPS6KA4O75676 772 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 USP48Q86UV5 1035 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 CCDC24Q8N4L8 307 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 GTF3C6Q969F1 213 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 CDC5LQ99459 802 aaKnown RBP17.86■□□□□ 0.45
CCDC12-211ENST00000604367 ZNF831Q5JPB2 1677 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms