RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 MASTLQ96GX5 879 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 COG3Q96JB2 828 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 SMARCA5O60264 1052 aaPredicted RBP3.82□□□□□ -1.8
VCAM1-205ENST00000603679 NPR1P16066 1061 aa3.82□□□□□ -1.8
VCAM1-205ENST00000603679 MAFBQ9Y5Q3 323 aaPredicted RBP3.82□□□□□ -1.8
VCAM1-205ENST00000603679 PARP3Q9Y6F1 533 aa3.82□□□□□ -1.8
VCAM1-205ENST00000603679 NFATC2IPQ8NCF5 419 aa3.82□□□□□ -1.8
VCAM1-205ENST00000603679 PNMA1Q8ND90 353 aa3.82□□□□□ -1.8
VCAM1-205ENST00000603679 ZNF496Q96IT1 587 aaPredicted RBP3.82□□□□□ -1.8
VCAM1-205ENST00000603679 EYA1Q99502 592 aa3.82□□□□□ -1.8
VCAM1-205ENST00000603679 HIRIP3Q9BW71 556 aaPredicted RBP3.82□□□□□ -1.8
VCAM1-205ENST00000603679 TMEM121BQ9BXQ6 578 aaPredicted RBP3.82□□□□□ -1.8
VCAM1-205ENST00000603679 FAM205AQ6ZU69 1335 aa3.82□□□□□ -1.8
VCAM1-205ENST00000603679 CRKLP46109 303 aaKnown RBP3.82□□□□□ -1.8
VCAM1-205ENST00000603679 FXR2P51116 673 aaKnown RBP eCLIP3.82□□□□□ -1.8
VCAM1-205ENST00000603679 MARSP56192 900 aaKnown RBP3.82□□□□□ -1.8
VCAM1-205ENST00000603679 DDX21Q9NR30 783 aaKnown RBP eCLIP3.82□□□□□ -1.8
VCAM1-205ENST00000603679 ATP9BO43861 1147 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 LZTS3O60299 673 aaPredicted RBP3.81□□□□□ -1.8
VCAM1-205ENST00000603679 ITGAEP38570 1179 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 SCNN1DP51172 638 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 PRMT2P55345 433 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 CST9Q5W186 159 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 ZNF853P0CG23 659 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 SAPCD2Q86UD0 394 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 CUEDC1Q9NWM3 386 aaPredicted RBP3.81□□□□□ -1.8
VCAM1-205ENST00000603679 PPP2R3BQ9Y5P8 575 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 ADGRG1Q9Y653 693 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 GBF1Q92538 1859 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 A0A0G2JS52 829 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 ANKRD62A6NC57 917 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 SEMA3FQ13275 785 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 EIF4A2Q14240 407 aaKnown RBP3.81□□□□□ -1.8
VCAM1-205ENST00000603679 NFIXQ14938 502 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 NUTM1Q86Y26 1132 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 GIPC2Q8TF65 315 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 RRAGCQ9HB90 399 aa3.81□□□□□ -1.8
VCAM1-205ENST00000603679 NAALADL2Q58DX5 795 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 TTC13Q8NBP0 860 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 C1orf216Q8TAB5 229 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 GMLQ99445 158 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 PLXNA1Q9UIW2 1896 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 HACL1Q9UJ83 578 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 TMEM265A0A087WTH1 108 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 CD46P15529 392 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 PRR5LQ6MZQ0 368 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 NPAS4Q8IUM7 802 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 SULF1Q8IWU6 871 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 TMOD3Q9NYL9 352 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 EGFL7Q9UHF1 273 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 PTPRSQ13332 1948 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 RFX7Q2KHR2 1363 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 ST20-MTHFSA0A0A6YYL1 179 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 CARNS1A5YM72 827 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 C2orf72A6NCS6 295 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 ATP6V1AP38606 617 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 FXR1P51114 621 aaKnown RBP eCLIP3.8□□□□□ -1.8
VCAM1-205ENST00000603679 TRIM28Q13263 835 aaKnown RBP3.8□□□□□ -1.8
VCAM1-205ENST00000603679 CCDC93Q567U6 631 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 ZNF34Q8IZ26 560 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 UCN2Q96RP3 112 aa3.8□□□□□ -1.8
VCAM1-205ENST00000603679 ADARB2Q9NS39 739 aaKnown RBP3.8□□□□□ -1.8
VCAM1-205ENST00000603679 KDM4AO75164 1064 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 PLEKHM2Q8IWE5 1019 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 CNPY4Q8N129 248 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 CLP1Q92989 425 aaKnown RBP3.79□□□□□ -1.8
VCAM1-205ENST00000603679 TMX4Q9H1E5 349 aaPredicted RBP3.79□□□□□ -1.8
VCAM1-205ENST00000603679 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.79□□□□□ -1.8
VCAM1-205ENST00000603679 KIF16BQ96L93 1317 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 KIAA1671Q9BY89 1806 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 HOXB7P09629 217 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 HSPA5P11021 654 aaKnown RBP3.79□□□□□ -1.8
VCAM1-205ENST00000603679 TIE1P35590 1138 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 FGD1P98174 961 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 NOGQ13253 232 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 PHLDB3Q6NSJ2 640 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 RAPGEF4Q8WZA2 1011 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 MCOLN1Q9GZU1 580 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 ZBTB3Q9H5J0 574 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 CDHR5Q9HBB8 845 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 ZNF804BA4D1E1 1349 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 ZNF541Q9H0D2 1346 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 RNMTO43148 476 aaKnown RBP3.79□□□□□ -1.8
VCAM1-205ENST00000603679 VAC14Q08AM6 782 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 PLEKHO1Q53GL0 409 aaPredicted RBP3.79□□□□□ -1.8
VCAM1-205ENST00000603679 TYW1BQ6NUM6 668 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 SLC43A3Q8NBI5 491 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 SUPT20HQ8NEM7 779 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 KCNH6Q9H252 994 aa3.79□□□□□ -1.8
VCAM1-205ENST00000603679 FOSBP53539 338 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 EIF4G2P78344 907 aaKnown RBP eCLIP3.78□□□□□ -1.8
VCAM1-205ENST00000603679 LDLRAD1Q5T700 205 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 PIP4P2Q8N4L2 257 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 ASAP1Q9ULH1 1129 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 SLC45A1Q9Y2W3 748 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 ANKRD33BA6NCL7 494 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 MAP3K7O43318 606 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 ALDH1B1P30837 517 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 IARSP41252 1262 aaKnown RBP3.78□□□□□ -1.8
VCAM1-205ENST00000603679 USP46P62068 366 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms