RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
UBE2E3-211ENST00000602837 SPRYD7Q5W111 196 aa9.53□□□□□ -0.88
UBE2E3-211ENST00000602837 IFNL2Q8IZJ0 200 aa9.53□□□□□ -0.88
UBE2E3-211ENST00000602837 OGFOD1Q8N543 542 aa9.53□□□□□ -0.88
UBE2E3-211ENST00000602837 ZNF594Q96JF6 807 aaPredicted RBP9.53□□□□□ -0.88
UBE2E3-211ENST00000602837 CDK15Q96Q40 435 aa9.53□□□□□ -0.88
UBE2E3-211ENST00000602837 KIAA1024Q9UPX6 916 aa9.53□□□□□ -0.88
UBE2E3-211ENST00000602837 NOD1Q9Y239 953 aa9.53□□□□□ -0.88
UBE2E3-211ENST00000602837 USTQ9Y2C2 406 aa9.53□□□□□ -0.88
UBE2E3-211ENST00000602837 RGPD1P0DJD0 1748 aa9.52□□□□□ -0.89
UBE2E3-211ENST00000602837 SCTRP47872 440 aa9.52□□□□□ -0.89
UBE2E3-211ENST00000602837 ELOAQ14241 798 aaKnown RBP9.52□□□□□ -0.89
UBE2E3-211ENST00000602837 MTHFSDQ2M296 383 aaKnown RBP9.52□□□□□ -0.89
UBE2E3-211ENST00000602837 KDRP35968 1356 aa9.51□□□□□ -0.89
UBE2E3-211ENST00000602837 WNT7AO00755 349 aa9.51□□□□□ -0.89
UBE2E3-211ENST00000602837 WDR43Q15061 677 aaKnown RBP eCLIP9.51□□□□□ -0.89
UBE2E3-211ENST00000602837 EZH2Q15910 746 aaKnown RBP9.51□□□□□ -0.89
UBE2E3-211ENST00000602837 CCDC184Q52MB2 194 aa9.51□□□□□ -0.89
UBE2E3-211ENST00000602837 MPRIPQ6WCQ1 1025 aa9.51□□□□□ -0.89
UBE2E3-211ENST00000602837 PHACTR3Q96KR7 559 aa9.51□□□□□ -0.89
UBE2E3-211ENST00000602837 TMPRSS4Q9NRS4 437 aa9.51□□□□□ -0.89
UBE2E3-211ENST00000602837 SHANK3Q9BYB0 1731 aa9.51□□□□□ -0.89
UBE2E3-211ENST00000602837 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
UBE2E3-211ENST00000602837 NEFMP07197 916 aa9.5□□□□□ -0.89
UBE2E3-211ENST00000602837 HSP90AB1P08238 724 aaKnown RBP9.5□□□□□ -0.89
UBE2E3-211ENST00000602837 GTF2IP78347 998 aa9.5□□□□□ -0.89
UBE2E3-211ENST00000602837 ZNF697Q5TEC3 545 aa9.5□□□□□ -0.89
UBE2E3-211ENST00000602837 DNAAF2Q9NVR5 837 aaKnown RBP9.5□□□□□ -0.89
UBE2E3-211ENST00000602837 BCL9O00512 1426 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 PKD1L3Q7Z443 1732 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 ADH1CP00326 375 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 DPYDQ12882 1025 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 FOXC1Q12948 553 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 USP4Q13107 963 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 AKAP4Q5JQC9 854 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 TRIM50Q86XT4 487 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 ANKMY2Q8IV38 441 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 CCDC146Q8IYE0 955 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 GAS2L2Q8NHY3 880 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 PRKD2Q9BZL6 878 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 LGR6Q9HBX8 967 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 MRS2Q9HD23 443 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 PCDHGA11Q9Y5H2 935 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 SBF2Q86WG5 1849 aa9.49□□□□□ -0.89
UBE2E3-211ENST00000602837 DKK1O94907 266 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 NR3C2P08235 984 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 CABP4P57796 275 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 PDE4CQ08493 712 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 DIEXFQ68CQ4 756 aaKnown RBP9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 FAM200AQ8TCP9 573 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 PIGBQ92521 554 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 DCAF5Q96JK2 942 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 CAMKK2Q96RR4 588 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 PNNQ9H307 717 aaKnown RBP9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 CYLDQ9NQC7 956 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 TMOD3Q9NYL9 352 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 ADAMTS8Q9UP79 889 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 MAPK8IP3Q9UPT6 1336 aa9.48□□□□□ -0.89
UBE2E3-211ENST00000602837 RNMTO43148 476 aaKnown RBP9.47□□□□□ -0.89
UBE2E3-211ENST00000602837 ATP1A2P50993 1020 aa9.47□□□□□ -0.89
UBE2E3-211ENST00000602837 ZNF598Q86UK7 904 aaKnown RBP9.47□□□□□ -0.89
UBE2E3-211ENST00000602837 LARGE2Q8N3Y3 721 aa9.47□□□□□ -0.89
UBE2E3-211ENST00000602837 MPNDQ8N594 471 aa9.47□□□□□ -0.89
UBE2E3-211ENST00000602837 PLEKHF1Q96S99 279 aa9.47□□□□□ -0.89
UBE2E3-211ENST00000602837 PODXL2Q9NZ53 605 aa9.47□□□□□ -0.89
UBE2E3-211ENST00000602837 PKD2L1Q9P0L9 805 aa9.47□□□□□ -0.89
UBE2E3-211ENST00000602837 DOT1LQ8TEK3 1739 aa9.46□□□□□ -0.89
UBE2E3-211ENST00000602837 TNS1Q9HBL0 1735 aaKnown RBP9.46□□□□□ -0.89
UBE2E3-211ENST00000602837 SENP3-EIF4A1A0A087X0R7 540 aa9.46□□□□□ -0.9
UBE2E3-211ENST00000602837 GNAT3A8MTJ3 354 aa9.46□□□□□ -0.9
UBE2E3-211ENST00000602837 ERVV-2B6SEH9 535 aa9.46□□□□□ -0.9
UBE2E3-211ENST00000602837 PLSCR1O15162 318 aa9.46□□□□□ -0.9
UBE2E3-211ENST00000602837 KCNQ4P56696 695 aa9.46□□□□□ -0.9
UBE2E3-211ENST00000602837 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
UBE2E3-211ENST00000602837 TPCN2Q8NHX9 752 aa9.46□□□□□ -0.9
UBE2E3-211ENST00000602837 RTF1Q92541 710 aaKnown RBP9.46□□□□□ -0.9
UBE2E3-211ENST00000602837 PLEKHG2Q9H7P9 1386 aa9.46□□□□□ -0.9
UBE2E3-211ENST00000602837 KDM6AO15550 1401 aaPredicted RBP9.46□□□□□ -0.9
UBE2E3-211ENST00000602837 NHSQ6T4R5 1651 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 SFI1A8K8P3 1242 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 STAU1O95793 577 aaKnown RBP9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 MYCP01106 439 aaPredicted RBP9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 ERVK-9P63128 1117 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 DCTN1Q14203 1278 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 NFE2L2Q16236 605 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 TXNRD1Q16881 649 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 PPP1R26Q5T8A7 1209 aaPredicted RBP9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 CCDC102BQ68D86 513 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 MCM10Q7L590 875 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 CCDC116Q8IYX3 515 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 SIX5Q8N196 739 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 IL17REQ8NFR9 667 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 RUNDC1Q96C34 613 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 ASAP1Q9ULH1 1129 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 RRP7AQ9Y3A4 280 aaKnown RBP9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 MAP3K5Q99683 1374 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 BTAF1O14981 1849 aa9.45□□□□□ -0.9
UBE2E3-211ENST00000602837 TEFQ10587 303 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms