RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 USP17L1Q7RTZ2 530 aa19.04■□□□□ 0.64
TRIM11-205ENST00000602308 UBE2Q1Q7Z7E8 422 aa19.04■□□□□ 0.64
TRIM11-205ENST00000602308 SASH1O94885 1247 aa19.03■□□□□ 0.64
TRIM11-205ENST00000602308 HSP90AB3PQ58FF7 597 aa19.03■□□□□ 0.64
TRIM11-205ENST00000602308 MXD3Q9BW11 206 aa19.03■□□□□ 0.64
TRIM11-205ENST00000602308 STXBP5LQ9Y2K9 1186 aa19.03■□□□□ 0.64
TRIM11-205ENST00000602308 PSME4Q14997 1843 aa19.02■□□□□ 0.64
TRIM11-205ENST00000602308 PER1O15534 1290 aaPredicted RBP19.02■□□□□ 0.64
TRIM11-205ENST00000602308 RPS8P62241 208 aaKnown RBP19.02■□□□□ 0.64
TRIM11-205ENST00000602308 EIF4G2P78344 907 aaKnown RBP eCLIP19.02■□□□□ 0.64
TRIM11-205ENST00000602308 MTFR1Q15390 333 aa19.02■□□□□ 0.64
TRIM11-205ENST00000602308 Q7L0L9 218 aa19.02■□□□□ 0.64
TRIM11-205ENST00000602308 DEFB123Q8N688 67 aa19.02■□□□□ 0.64
TRIM11-205ENST00000602308 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.64
TRIM11-205ENST00000602308 GGA1Q9UJY5 639 aa19.02■□□□□ 0.64
TRIM11-205ENST00000602308 NR2E3Q9Y5X4 410 aa19.02■□□□□ 0.64
TRIM11-205ENST00000602308 LAMB1P07942 1786 aa19.01■□□□□ 0.63
TRIM11-205ENST00000602308 TESPA1A2RU30 521 aaPredicted RBP19.01■□□□□ 0.63
TRIM11-205ENST00000602308 ARHGEF6Q15052 776 aa19.01■□□□□ 0.63
TRIM11-205ENST00000602308 HTATIP2Q9BUP3 242 aa19.01■□□□□ 0.63
TRIM11-205ENST00000602308 ANKIB1Q9P2G1 1089 aa19.01■□□□□ 0.63
TRIM11-205ENST00000602308 COPS6Q7L5N1 327 aa19■□□□□ 0.63
TRIM11-205ENST00000602308 PODNQ7Z5L7 613 aa19■□□□□ 0.63
TRIM11-205ENST00000602308 APOBEC3FQ8IUX4 373 aaKnown RBP19■□□□□ 0.63
TRIM11-205ENST00000602308 FAM89AQ96GI7 184 aa19■□□□□ 0.63
TRIM11-205ENST00000602308 SPTBN5Q9NRC6 3674 aaKnown RBP18.99■□□□□ 0.63
TRIM11-205ENST00000602308 GPR153Q6NV75 609 aa18.99■□□□□ 0.63
TRIM11-205ENST00000602308 OGFOD1Q8N543 542 aa18.99■□□□□ 0.63
TRIM11-205ENST00000602308 STAP2Q9UGK3 403 aa18.99■□□□□ 0.63
TRIM11-205ENST00000602308 SSC5DA1L4H1 1573 aa18.98■□□□□ 0.63
TRIM11-205ENST00000602308 EIF2S2P20042 333 aaKnown RBP18.98■□□□□ 0.63
TRIM11-205ENST00000602308 AIMP1Q12904 312 aaKnown RBP18.98■□□□□ 0.63
TRIM11-205ENST00000602308 DACT2Q5SW24 774 aa18.98■□□□□ 0.63
TRIM11-205ENST00000602308 ANKRD13DQ6ZTN6 518 aa18.98■□□□□ 0.63
TRIM11-205ENST00000602308 ARHGAP39Q9C0H5 1083 aa18.98■□□□□ 0.63
TRIM11-205ENST00000602308 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.97■□□□□ 0.63
TRIM11-205ENST00000602308 XAGE3Q8WTP9 111 aa18.97■□□□□ 0.63
TRIM11-205ENST00000602308 SEC31BQ9NQW1 1179 aa18.97■□□□□ 0.63
TRIM11-205ENST00000602308 MTMR10Q9NXD2 777 aa18.97■□□□□ 0.63
TRIM11-205ENST00000602308 PPP1R12BO60237 982 aaPredicted RBP18.96■□□□□ 0.63
TRIM11-205ENST00000602308 U2AF1L5P0DN76 240 aaPredicted RBP18.96■□□□□ 0.63
TRIM11-205ENST00000602308 U2AF1Q01081 240 aaKnown RBP eCLIP18.96■□□□□ 0.63
TRIM11-205ENST00000602308 CNGB1Q14028 1251 aaPredicted RBP18.96■□□□□ 0.63
TRIM11-205ENST00000602308 ZBED3Q96IU2 234 aaPredicted RBP18.96■□□□□ 0.63
TRIM11-205ENST00000602308 DEFB129Q9H1M3 183 aa18.96■□□□□ 0.63
TRIM11-205ENST00000602308 PRDM6Q9NQX0 595 aa18.96■□□□□ 0.63
TRIM11-205ENST00000602308 UNCXA6NJT0 531 aa18.95■□□□□ 0.62
TRIM11-205ENST00000602308 GJA8P48165 433 aa18.95■□□□□ 0.62
TRIM11-205ENST00000602308 MS4A4AQ96JQ5 239 aa18.95■□□□□ 0.62
TRIM11-205ENST00000602308 ZFYVE28Q9HCC9 887 aa18.95■□□□□ 0.62
TRIM11-205ENST00000602308 TAF1CQ15572 869 aaPredicted RBP18.94■□□□□ 0.62
TRIM11-205ENST00000602308 RTL5Q5HYW3 569 aaPredicted RBP18.94■□□□□ 0.62
TRIM11-205ENST00000602308 NKX2-3Q8TAU0 364 aa18.94■□□□□ 0.62
TRIM11-205ENST00000602308 ZNF646O15015 1829 aaPredicted RBP18.94■□□□□ 0.62
TRIM11-205ENST00000602308 ZSWIM8A7E2V4 1837 aa18.93■□□□□ 0.62
TRIM11-205ENST00000602308 BRI3BPQ8WY22 251 aa18.93■□□□□ 0.62
TRIM11-205ENST00000602308 COL1A1P02452 1464 aaPredicted RBP18.92■□□□□ 0.62
TRIM11-205ENST00000602308 USP2O75604 605 aaPredicted RBP18.92■□□□□ 0.62
TRIM11-205ENST00000602308 FBXW7Q969H0 707 aa18.92■□□□□ 0.62
TRIM11-205ENST00000602308 NUDCQ9Y266 331 aa18.92■□□□□ 0.62
TRIM11-205ENST00000602308 IRS4O14654 1257 aaPredicted RBP18.91■□□□□ 0.62
TRIM11-205ENST00000602308 GJB1P08034 283 aa18.91■□□□□ 0.62
TRIM11-205ENST00000602308 LACTBP83111 547 aaPredicted RBP18.91■□□□□ 0.62
TRIM11-205ENST00000602308 STRIP1Q5VSL9 837 aa18.91■□□□□ 0.62
TRIM11-205ENST00000602308 ISCA1Q9BUE6 129 aa18.91■□□□□ 0.62
TRIM11-205ENST00000602308 MYO3BQ8WXR4 1341 aa18.91■□□□□ 0.62
TRIM11-205ENST00000602308 EVI5O60447 810 aa18.9■□□□□ 0.62
TRIM11-205ENST00000602308 KIAA0825Q8IV33 1275 aa18.9■□□□□ 0.62
TRIM11-205ENST00000602308 FAM43AQ8N2R8 423 aa18.9■□□□□ 0.62
TRIM11-205ENST00000602308 OPTNQ96CV9 577 aa18.9■□□□□ 0.62
TRIM11-205ENST00000602308 GDF15Q99988 308 aa18.9■□□□□ 0.62
TRIM11-205ENST00000602308 XDHP47989 1333 aa18.9■□□□□ 0.62
TRIM11-205ENST00000602308 ATP5J2-PTCD1G3V325 749 aa18.89■□□□□ 0.61
TRIM11-205ENST00000602308 FARP2O94887 1054 aaPredicted RBP18.89■□□□□ 0.61
TRIM11-205ENST00000602308 CCL5P13501 91 aa18.89■□□□□ 0.61
TRIM11-205ENST00000602308 ATP2B4P23634 1241 aa18.89■□□□□ 0.61
TRIM11-205ENST00000602308 IREB2P48200 963 aaKnown RBP18.89■□□□□ 0.61
TRIM11-205ENST00000602308 MMP14P50281 582 aa18.89■□□□□ 0.61
TRIM11-205ENST00000602308 NBPF12Q5TAG4 269 aaPredicted RBP18.89■□□□□ 0.61
TRIM11-205ENST00000602308 ANKRD13AQ8IZ07 590 aa18.89■□□□□ 0.61
TRIM11-205ENST00000602308 CFAP53Q96M91 514 aa18.89■□□□□ 0.61
TRIM11-205ENST00000602308 ELP3Q9H9T3 547 aa18.89■□□□□ 0.61
TRIM11-205ENST00000602308 CCL15-CCL14A0A0B4J2E2 113 aa18.88■□□□□ 0.61
TRIM11-205ENST00000602308 ECM2O94769 699 aaPredicted RBP18.88■□□□□ 0.61
TRIM11-205ENST00000602308 GNRH1P01148 92 aa18.88■□□□□ 0.61
TRIM11-205ENST00000602308 BMP8BP34820 402 aa18.88■□□□□ 0.61
TRIM11-205ENST00000602308 PRMT2P55345 433 aa18.88■□□□□ 0.61
TRIM11-205ENST00000602308 KIF22Q14807 665 aa18.88■□□□□ 0.61
TRIM11-205ENST00000602308 CCL15Q16663 113 aa18.88■□□□□ 0.61
TRIM11-205ENST00000602308 CNKSR2Q8WXI2 1034 aa18.88■□□□□ 0.61
TRIM11-205ENST00000602308 TIMELESSQ9UNS1 1208 aa18.88■□□□□ 0.61
TRIM11-205ENST00000602308 CTGFP29279 349 aa18.87■□□□□ 0.61
TRIM11-205ENST00000602308 LRIT3Q3SXY7 679 aa18.87■□□□□ 0.61
TRIM11-205ENST00000602308 SUPT20HL1Q3ZLR7 823 aa18.87■□□□□ 0.61
TRIM11-205ENST00000602308 RNF208Q9H0X6 261 aa18.87■□□□□ 0.61
TRIM11-205ENST00000602308 PPP2R3BQ9Y5P8 575 aa18.87■□□□□ 0.61
TRIM11-205ENST00000602308 MED23Q9ULK4 1368 aa18.86■□□□□ 0.61
TRIM11-205ENST00000602308 TLR2O60603 784 aa18.86■□□□□ 0.61
TRIM11-205ENST00000602308 GRK4P32298 578 aa18.86■□□□□ 0.61
TRIM11-205ENST00000602308 U2AF1L4Q8WU68 220 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms