RNA–Protein interactions for RNA: ENST00000601361.1

FARP1-234, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-234ENST00000601361 KCNQ5Q9NR82 932 aa11.52□□□□□ -0.57
FARP1-234ENST00000601361 BSDC1Q9NW68 430 aaPredicted RBP11.52□□□□□ -0.57
FARP1-234ENST00000601361 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.57
FARP1-234ENST00000601361 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
FARP1-234ENST00000601361 ANKRD18BA2A2Z9 1011 aa11.51□□□□□ -0.57
FARP1-234ENST00000601361 E9PSI1 815 aa11.51□□□□□ -0.57
FARP1-234ENST00000601361 TAF7LQ5H9L4 462 aa11.51□□□□□ -0.57
FARP1-234ENST00000601361 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
FARP1-234ENST00000601361 TRPM4Q8TD43 1214 aa11.51□□□□□ -0.57
FARP1-234ENST00000601361 ZC3H15Q8WU90 426 aaKnown RBP11.51□□□□□ -0.57
FARP1-234ENST00000601361 ZIC5Q96T25 663 aa11.51□□□□□ -0.57
FARP1-234ENST00000601361 GLIS2Q9BZE0 524 aaPredicted RBP11.51□□□□□ -0.57
FARP1-234ENST00000601361 ANKRD2Q9GZV1 360 aa11.51□□□□□ -0.57
FARP1-234ENST00000601361 PGAP2Q9UHJ9 254 aa11.51□□□□□ -0.57
FARP1-234ENST00000601361 MINPP1Q9UNW1 487 aa11.51□□□□□ -0.57
FARP1-234ENST00000601361 SCN9AQ15858 1988 aa11.5□□□□□ -0.57
FARP1-234ENST00000601361 SHTN1A0MZ66 631 aa11.5□□□□□ -0.57
FARP1-234ENST00000601361 CELF2O95319 508 aaKnown RBP11.5□□□□□ -0.57
FARP1-234ENST00000601361 CCT4P50991 539 aaKnown RBP11.5□□□□□ -0.57
FARP1-234ENST00000601361 IFIT5Q13325 482 aaKnown RBP11.5□□□□□ -0.57
FARP1-234ENST00000601361 BEND3Q5T5X7 828 aa11.5□□□□□ -0.57
FARP1-234ENST00000601361 PRPF38BQ5VTL8 546 aaKnown RBP11.5□□□□□ -0.57
FARP1-234ENST00000601361 CDC37L1Q7L3B6 337 aa11.5□□□□□ -0.57
FARP1-234ENST00000601361 PLA2G12BQ9BX93 195 aa11.5□□□□□ -0.57
FARP1-234ENST00000601361 SRCIN1Q9C0H9 1055 aa11.5□□□□□ -0.57
FARP1-234ENST00000601361 CEP290O15078 2479 aa11.49□□□□□ -0.57
FARP1-234ENST00000601361 GRM8O00222 908 aa11.49□□□□□ -0.57
FARP1-234ENST00000601361 HIRAP54198 1017 aaPredicted RBP11.49□□□□□ -0.57
FARP1-234ENST00000601361 RSBN1LQ6PCB5 846 aaPredicted RBP11.49□□□□□ -0.57
FARP1-234ENST00000601361 PODNQ7Z5L7 613 aa11.49□□□□□ -0.57
FARP1-234ENST00000601361 DCPSQ96C86 337 aaKnown RBP11.49□□□□□ -0.57
FARP1-234ENST00000601361 LEMD3Q9Y2U8 911 aa11.49□□□□□ -0.57
FARP1-234ENST00000601361 MED23Q9ULK4 1368 aa11.49□□□□□ -0.57
FARP1-234ENST00000601361 BRCA2P51587 3418 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 KIAA0100Q14667 2235 aaKnown RBP11.48□□□□□ -0.57
FARP1-234ENST00000601361 USP17L3A6NCW0 530 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 USP17L4A6NCW7 530 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 ALDH1L1O75891 902 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 CSF1RP07333 972 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 VIL1P09327 827 aaKnown RBP11.48□□□□□ -0.57
FARP1-234ENST00000601361 CASP7P55210 303 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 SOX10P56693 466 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 NOGQ13253 232 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 CCDC57Q2TAC2 916 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 KIF4BQ2VIQ3 1234 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 USP17L1Q7RTZ2 530 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 USP48Q86UV5 1035 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 ZNF804BA4D1E1 1349 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 ZNF521Q96K83 1311 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 LAMB1P07942 1786 aa11.48□□□□□ -0.57
FARP1-234ENST00000601361 FAM155AB1AL88 458 aaPredicted RBP11.47□□□□□ -0.57
FARP1-234ENST00000601361 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
FARP1-234ENST00000601361 CHRNDQ07001 517 aa11.47□□□□□ -0.57
FARP1-234ENST00000601361 LMBR1LQ6UX01 489 aa11.47□□□□□ -0.57
FARP1-234ENST00000601361 KRT26Q7Z3Y9 468 aa11.47□□□□□ -0.57
FARP1-234ENST00000601361 SULF1Q8IWU6 871 aa11.47□□□□□ -0.57
FARP1-234ENST00000601361 OGFOD1Q8N543 542 aa11.47□□□□□ -0.57
FARP1-234ENST00000601361 AGBL3Q8NEM8 1001 aa11.47□□□□□ -0.57
FARP1-234ENST00000601361 CNNM1Q9NRU3 951 aa11.47□□□□□ -0.57
FARP1-234ENST00000601361 WTIPA6NIX2 430 aaPredicted RBP11.46□□□□□ -0.57
FARP1-234ENST00000601361 CCER2I3L3R5 266 aa11.46□□□□□ -0.57
FARP1-234ENST00000601361 PLIN1O60240 522 aa11.46□□□□□ -0.57
FARP1-234ENST00000601361 EGFRP00533 1210 aa11.46□□□□□ -0.57
FARP1-234ENST00000601361 FOXO4P98177 505 aa11.46□□□□□ -0.57
FARP1-234ENST00000601361 COA1Q9GZY4 146 aa11.46□□□□□ -0.57
FARP1-234ENST00000601361 SAGE1Q9NXZ1 904 aa11.46□□□□□ -0.57
FARP1-234ENST00000601361 GGA3Q9NZ52 723 aa11.46□□□□□ -0.57
FARP1-234ENST00000601361 PTPRCP08575 1304 aa11.45□□□□□ -0.58
FARP1-234ENST00000601361 MYO3BQ8WXR4 1341 aa11.45□□□□□ -0.58
FARP1-234ENST00000601361 ZNF646O15015 1829 aaPredicted RBP11.45□□□□□ -0.58
FARP1-234ENST00000601361 ADM5C9JUS6 153 aa11.45□□□□□ -0.58
FARP1-234ENST00000601361 TAF5LO75529 589 aa11.45□□□□□ -0.58
FARP1-234ENST00000601361 SLFN5Q08AF3 891 aa11.45□□□□□ -0.58
FARP1-234ENST00000601361 LDHAL6AQ6ZMR3 332 aa11.45□□□□□ -0.58
FARP1-234ENST00000601361 MRPL50Q8N5N7 158 aaKnown RBP11.45□□□□□ -0.58
FARP1-234ENST00000601361 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
FARP1-234ENST00000601361 MYOZ2Q9NPC6 264 aa11.45□□□□□ -0.58
FARP1-234ENST00000601361 SMC4Q9NTJ3 1288 aa11.45□□□□□ -0.58
FARP1-234ENST00000601361 SCARF1Q14162 830 aa11.44□□□□□ -0.58
FARP1-234ENST00000601361 EPHA10Q5JZY3 1008 aa11.44□□□□□ -0.58
FARP1-234ENST00000601361 STRIP1Q5VSL9 837 aa11.44□□□□□ -0.58
FARP1-234ENST00000601361 ANGEL2Q5VTE6 544 aaKnown RBP11.44□□□□□ -0.58
FARP1-234ENST00000601361 ZNF804AQ7Z570 1209 aa11.44□□□□□ -0.58
FARP1-234ENST00000601361 C2orf69Q8N8R5 385 aa11.44□□□□□ -0.58
FARP1-234ENST00000601361 SSH1Q8WYL5 1049 aa11.44□□□□□ -0.58
FARP1-234ENST00000601361 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
FARP1-234ENST00000601361 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
FARP1-234ENST00000601361 KLRK1P26718 216 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 HUNKP57058 714 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 ZNF280AP59817 542 aaPredicted RBP11.43□□□□□ -0.58
FARP1-234ENST00000601361 GTF2IP78347 998 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 DACT2Q5SW24 774 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 TTLL5Q6EMB2 1281 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 DLK2Q6UY11 383 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 TXNRD3Q86VQ6 643 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 SUCLG2Q96I99 432 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 MXD3Q9BW11 206 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 HDAC9Q9UKV0 1011 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 SZT2Q5T011 3432 aa11.43□□□□□ -0.58
FARP1-234ENST00000601361 PAPPA2Q9BXP8 1791 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms