RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 GRAPQ13588 217 aa24.09■■□□□ 1.45
PNKP-214ENST00000600573 COL23A1Q86Y22 540 aaPredicted RBP24.09■■□□□ 1.45
PNKP-214ENST00000600573 SPRYD3Q8NCJ5 442 aa24.09■■□□□ 1.45
PNKP-214ENST00000600573 GRAPLQ8TC17 118 aaPredicted RBP24.09■■□□□ 1.45
PNKP-214ENST00000600573 GNL3LQ9NVN8 582 aaKnown RBP24.09■■□□□ 1.45
PNKP-214ENST00000600573 A0A0D9SFI3 127 aa24.08■■□□□ 1.45
PNKP-214ENST00000600573 ZBTB22O15209 634 aa24.08■■□□□ 1.45
PNKP-214ENST00000600573 SF3B2Q13435 895 aaKnown RBP24.08■■□□□ 1.45
PNKP-214ENST00000600573 NFKBIBQ15653 356 aa24.08■■□□□ 1.45
PNKP-214ENST00000600573 CRY2Q49AN0 593 aa24.08■■□□□ 1.45
PNKP-214ENST00000600573 KCNB2Q92953 911 aa24.08■■□□□ 1.45
PNKP-214ENST00000600573 CAMKK2Q96RR4 588 aa24.08■■□□□ 1.45
PNKP-214ENST00000600573 ZMYM1Q5SVZ6 1142 aa24.07■■□□□ 1.44
PNKP-214ENST00000600573 ARAP2Q8WZ64 1704 aa24.07■■□□□ 1.44
PNKP-214ENST00000600573 KLRG2A4D1S0 409 aaPredicted RBP24.06■■□□□ 1.44
PNKP-214ENST00000600573 HSP90AA1P07900 732 aaKnown RBP24.06■■□□□ 1.44
PNKP-214ENST00000600573 MCAMP43121 646 aa24.06■■□□□ 1.44
PNKP-214ENST00000600573 ZAP70P43403 619 aa24.06■■□□□ 1.44
PNKP-214ENST00000600573 RNF20Q5VTR2 975 aa24.06■■□□□ 1.44
PNKP-214ENST00000600573 RPGRQ92834 1020 aaKnown RBP24.06■■□□□ 1.44
PNKP-214ENST00000600573 RBM17Q96I25 401 aaKnown RBP24.06■■□□□ 1.44
PNKP-214ENST00000600573 CIZ1Q9ULV3 898 aaPredicted RBP24.06■■□□□ 1.44
PNKP-214ENST00000600573 NDUFB9Q9Y6M9 179 aa24.06■■□□□ 1.44
PNKP-214ENST00000600573 ZKSCAN1P17029 563 aaPredicted RBP24.06■■□□□ 1.44
PNKP-214ENST00000600573 PHKA1P46020 1223 aa24.06■■□□□ 1.44
PNKP-214ENST00000600573 CAVIN4Q5BKX8 364 aa24.06■■□□□ 1.44
PNKP-214ENST00000600573 PALD1Q9ULE6 856 aa24.06■■□□□ 1.44
PNKP-214ENST00000600573 CASZ1Q86V15 1759 aa24.05■■□□□ 1.44
PNKP-214ENST00000600573 STK32BQ9NY57 414 aa24.05■■□□□ 1.44
PNKP-214ENST00000600573 BBOX1O75936 387 aa24.04■■□□□ 1.44
PNKP-214ENST00000600573 HOXA10P31260 410 aaPredicted RBP24.04■■□□□ 1.44
PNKP-214ENST00000600573 DDR1Q08345 913 aa24.04■■□□□ 1.44
PNKP-214ENST00000600573 SCARF1Q14162 830 aa24.04■■□□□ 1.44
PNKP-214ENST00000600573 NECTIN1Q15223 517 aa24.04■■□□□ 1.44
PNKP-214ENST00000600573 TMC4Q7Z404 712 aa24.04■■□□□ 1.44
PNKP-214ENST00000600573 SPATA5Q8NB90 893 aa24.04■■□□□ 1.44
PNKP-214ENST00000600573 HMG20BQ9P0W2 317 aa24.04■■□□□ 1.44
PNKP-214ENST00000600573 DDIT3P35638 169 aa24.03■■□□□ 1.44
PNKP-214ENST00000600573 BAG6P46379 1132 aa24.03■■□□□ 1.44
PNKP-214ENST00000600573 KCNJ4P48050 445 aa24.03■■□□□ 1.44
PNKP-214ENST00000600573 PTH1RQ03431 593 aa24.03■■□□□ 1.44
PNKP-214ENST00000600573 BRIP1Q9BX63 1249 aa24.03■■□□□ 1.44
PNKP-214ENST00000600573 TM6SF1Q9BZW5 370 aa24.03■■□□□ 1.44
PNKP-214ENST00000600573 U3KPZ7 1027 aaPredicted RBP24.03■■□□□ 1.44
PNKP-214ENST00000600573 SEMA3EO15041 775 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 SLC15A2Q16348 729 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 CCDC24Q8N4L8 307 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 CRAMP1Q96RY5 1269 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 LEMD3Q9Y2U8 911 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 ZNF804BA4D1E1 1349 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 PNPLA7Q6ZV29 1317 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 UBE3CQ15386 1083 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 APPBP2Q92624 585 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 RBM8AQ9Y5S9 174 aaKnown RBP24.02■■□□□ 1.44
PNKP-214ENST00000600573 SNX14Q9Y5W7 946 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 PARP3Q9Y6F1 533 aa24.02■■□□□ 1.44
PNKP-214ENST00000600573 IGSF3O75054 1194 aa24.01■■□□□ 1.43
PNKP-214ENST00000600573 CYP2E1P05181 493 aaPredicted RBP24.01■■□□□ 1.43
PNKP-214ENST00000600573 EZH2Q15910 746 aaKnown RBP24.01■■□□□ 1.43
PNKP-214ENST00000600573 TSGA10IPQ3SY00 556 aa24.01■■□□□ 1.43
PNKP-214ENST00000600573 DSCC1Q9BVC3 393 aa24.01■■□□□ 1.43
PNKP-214ENST00000600573 NEK4P51957 841 aa24■■□□□ 1.43
PNKP-214ENST00000600573 EN1Q05925 392 aaPredicted RBP24■■□□□ 1.43
PNKP-214ENST00000600573 MYH7P12883 1935 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 PSMA5P28066 241 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 BCAMP50895 628 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 MAP3K12Q12852 859 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 KRT32Q14532 448 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 ZNF589Q86UQ0 364 aaPredicted RBP23.99■■□□□ 1.43
PNKP-214ENST00000600573 VPS37DQ86XT2 251 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 CCDC125Q86Z20 511 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 DENND2AQ9ULE3 1009 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 PDS5AQ29RF7 1337 aaKnown RBP23.99■■□□□ 1.43
PNKP-214ENST00000600573 PDE6BP35913 854 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 RASGRF1Q13972 1273 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 CREB3L3Q68CJ9 461 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 PRPF40BQ6NWY9 871 aaKnown RBP23.99■■□□□ 1.43
PNKP-214ENST00000600573 TMED8Q6PL24 325 aaPredicted RBP23.99■■□□□ 1.43
PNKP-214ENST00000600573 FBXO33Q7Z6M2 555 aa23.99■■□□□ 1.43
PNKP-214ENST00000600573 ADD2P35612 726 aa23.98■■□□□ 1.43
PNKP-214ENST00000600573 WASHC4Q2M389 1173 aa23.97■■□□□ 1.43
PNKP-214ENST00000600573 TNRC6CQ9HCJ0 1690 aaKnown RBP23.97■■□□□ 1.43
PNKP-214ENST00000600573 XDHP47989 1333 aa23.96■■□□□ 1.43
PNKP-214ENST00000600573 SNAP23O00161 211 aa23.96■■□□□ 1.43
PNKP-214ENST00000600573 SLC9C2Q5TAH2 1124 aa23.96■■□□□ 1.43
PNKP-214ENST00000600573 C15orf52Q6ZUT6 534 aaKnown RBP23.96■■□□□ 1.43
PNKP-214ENST00000600573 FAM84BQ96KN1 310 aaPredicted RBP23.96■■□□□ 1.43
PNKP-214ENST00000600573 MAST3O60307 1309 aa23.96■■□□□ 1.43
PNKP-214ENST00000600573 SLC27A2O14975 620 aa23.95■■□□□ 1.43
PNKP-214ENST00000600573 FRAT2O75474 233 aaPredicted RBP23.95■■□□□ 1.43
PNKP-214ENST00000600573 MMP10P09238 476 aa23.95■■□□□ 1.43
PNKP-214ENST00000600573 PI16Q6UXB8 463 aa23.95■■□□□ 1.43
PNKP-214ENST00000600573 RASEFQ8IZ41 740 aa23.95■■□□□ 1.43
PNKP-214ENST00000600573 SEC62Q99442 399 aaKnown RBP23.95■■□□□ 1.43
PNKP-214ENST00000600573 PIH1D3Q9NQM4 214 aaKnown RBP23.95■■□□□ 1.43
PNKP-214ENST00000600573 CTNNA3Q9UI47 895 aa23.95■■□□□ 1.43
PNKP-214ENST00000600573 AKAP11Q9UKA4 1901 aa23.95■■□□□ 1.42
PNKP-214ENST00000600573 A0A1B0GUL6 1792 aa23.95■■□□□ 1.42
PNKP-214ENST00000600573 HIBADHP31937 336 aaKnown RBP23.95■■□□□ 1.42
PNKP-214ENST00000600573 OSBP2Q969R2 916 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms