RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 CST9Q5W186 159 aa13.78□□□□□ -0.2
SIN3B-210ENST00000599880 C15orf52Q6ZUT6 534 aaKnown RBP13.78□□□□□ -0.2
SIN3B-210ENST00000599880 GMLQ99445 158 aa13.78□□□□□ -0.2
SIN3B-210ENST00000599880 GLIS2Q9BZE0 524 aaPredicted RBP13.78□□□□□ -0.2
SIN3B-210ENST00000599880 EGFRP00533 1210 aa13.77□□□□□ -0.21
SIN3B-210ENST00000599880 HSPA1AP0DMV8 641 aaKnown RBP13.77□□□□□ -0.21
SIN3B-210ENST00000599880 HSPA1BP0DMV9 641 aaKnown RBP13.77□□□□□ -0.21
SIN3B-210ENST00000599880 KCNJ4P48050 445 aa13.77□□□□□ -0.21
SIN3B-210ENST00000599880 VEGFBP49765 207 aa13.77□□□□□ -0.21
SIN3B-210ENST00000599880 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.21
SIN3B-210ENST00000599880 RABL6Q3YEC7 729 aaPredicted RBP13.77□□□□□ -0.21
SIN3B-210ENST00000599880 STRIP1Q5VSL9 837 aa13.77□□□□□ -0.21
SIN3B-210ENST00000599880 TXNRD3Q86VQ6 643 aa13.77□□□□□ -0.21
SIN3B-210ENST00000599880 KAZALD1Q96I82 304 aa13.77□□□□□ -0.21
SIN3B-210ENST00000599880 SUCLG2Q96I99 432 aa13.77□□□□□ -0.21
SIN3B-210ENST00000599880 SMC4Q9NTJ3 1288 aa13.77□□□□□ -0.21
SIN3B-210ENST00000599880 ABT1Q9ULW3 272 aaKnown RBP13.77□□□□□ -0.21
SIN3B-210ENST00000599880 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.21
SIN3B-210ENST00000599880 TLL2Q9Y6L7 1015 aa13.77□□□□□ -0.21
SIN3B-210ENST00000599880 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
SIN3B-210ENST00000599880 TAF7LQ5H9L4 462 aa13.76□□□□□ -0.21
SIN3B-210ENST00000599880 DACT2Q5SW24 774 aa13.76□□□□□ -0.21
SIN3B-210ENST00000599880 LDHAL6AQ6ZMR3 332 aa13.76□□□□□ -0.21
SIN3B-210ENST00000599880 HHIPL1Q96JK4 782 aa13.76□□□□□ -0.21
SIN3B-210ENST00000599880 CELF2O95319 508 aaKnown RBP13.75□□□□□ -0.21
SIN3B-210ENST00000599880 KLRK1P26718 216 aa13.75□□□□□ -0.21
SIN3B-210ENST00000599880 ECE1P42892 770 aa13.75□□□□□ -0.21
SIN3B-210ENST00000599880 DCPSQ96C86 337 aaKnown RBP13.75□□□□□ -0.21
SIN3B-210ENST00000599880 MYOZ2Q9NPC6 264 aa13.75□□□□□ -0.21
SIN3B-210ENST00000599880 CNNM1Q9NRU3 951 aa13.75□□□□□ -0.21
SIN3B-210ENST00000599880 PITPNM2Q9BZ72 1349 aa13.74□□□□□ -0.21
SIN3B-210ENST00000599880 WDR33Q9C0J8 1336 aaKnown RBP13.74□□□□□ -0.21
SIN3B-210ENST00000599880 TAF5LO75529 589 aa13.74□□□□□ -0.21
SIN3B-210ENST00000599880 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
SIN3B-210ENST00000599880 KRT26Q7Z3Y9 468 aa13.74□□□□□ -0.21
SIN3B-210ENST00000599880 SAPCD2Q86UD0 394 aa13.74□□□□□ -0.21
SIN3B-210ENST00000599880 ZNF594Q96JF6 807 aaPredicted RBP13.74□□□□□ -0.21
SIN3B-210ENST00000599880 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
SIN3B-210ENST00000599880 BICC1Q9H694 974 aaKnown RBP13.74□□□□□ -0.21
SIN3B-210ENST00000599880 CD209Q9NNX6 404 aa13.74□□□□□ -0.21
SIN3B-210ENST00000599880 GGA3Q9NZ52 723 aa13.74□□□□□ -0.21
SIN3B-210ENST00000599880 MYH13Q9UKX3 1938 aa13.74□□□□□ -0.21
SIN3B-210ENST00000599880 MROH5Q6ZUA9 1318 aa13.73□□□□□ -0.21
SIN3B-210ENST00000599880 KIF16BQ96L93 1317 aa13.73□□□□□ -0.21
SIN3B-210ENST00000599880 UBE4AQ14139 1066 aa13.73□□□□□ -0.21
SIN3B-210ENST00000599880 RBM26Q5T8P6 1007 aaKnown RBP13.73□□□□□ -0.21
SIN3B-210ENST00000599880 TTLL5Q6EMB2 1281 aa13.73□□□□□ -0.21
SIN3B-210ENST00000599880 ZNF804AQ7Z570 1209 aa13.73□□□□□ -0.21
SIN3B-210ENST00000599880 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
SIN3B-210ENST00000599880 SULF1Q8IWU6 871 aa13.73□□□□□ -0.21
SIN3B-210ENST00000599880 OGFOD1Q8N543 542 aa13.73□□□□□ -0.21
SIN3B-210ENST00000599880 ANKRD44Q8N8A2 993 aa13.73□□□□□ -0.21
SIN3B-210ENST00000599880 HELBQ8NG08 1087 aaPredicted RBP13.73□□□□□ -0.21
SIN3B-210ENST00000599880 CAPNS2Q96L46 248 aa13.73□□□□□ -0.21
SIN3B-210ENST00000599880 IL1R1P14778 569 aa13.72□□□□□ -0.21
SIN3B-210ENST00000599880 IFFO2Q5TF58 517 aa13.72□□□□□ -0.21
SIN3B-210ENST00000599880 API5Q9BZZ5 524 aaKnown RBP13.72□□□□□ -0.21
SIN3B-210ENST00000599880 PAPPA2Q9BXP8 1791 aa13.72□□□□□ -0.21
SIN3B-210ENST00000599880 SNAP23O00161 211 aa13.71□□□□□ -0.21
SIN3B-210ENST00000599880 RARSP54136 660 aaKnown RBP13.71□□□□□ -0.21
SIN3B-210ENST00000599880 FKBP1AP62942 108 aaKnown RBP13.71□□□□□ -0.21
SIN3B-210ENST00000599880 GTF2IP78347 998 aa13.71□□□□□ -0.21
SIN3B-210ENST00000599880 MAP2K1Q02750 393 aaPredicted RBP13.71□□□□□ -0.21
SIN3B-210ENST00000599880 SCARF1Q14162 830 aa13.71□□□□□ -0.21
SIN3B-210ENST00000599880 MIER1Q8N108 512 aa13.71□□□□□ -0.21
SIN3B-210ENST00000599880 ARHGAP45Q92619 1136 aa13.71□□□□□ -0.21
SIN3B-210ENST00000599880 FBXW7Q969H0 707 aa13.71□□□□□ -0.21
SIN3B-210ENST00000599880 ZNF408Q9H9D4 720 aa13.71□□□□□ -0.21
SIN3B-210ENST00000599880 WBP1LQ9NX94 342 aa13.71□□□□□ -0.21
SIN3B-210ENST00000599880 HDAC9Q9UKV0 1011 aa13.71□□□□□ -0.21
SIN3B-210ENST00000599880 RIPOR2Q9Y4F9 1068 aa13.71□□□□□ -0.21
SIN3B-210ENST00000599880 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
SIN3B-210ENST00000599880 MAP2K2P36507 400 aa13.7□□□□□ -0.22
SIN3B-210ENST00000599880 ANGEL2Q5VTE6 544 aaKnown RBP13.7□□□□□ -0.22
SIN3B-210ENST00000599880 CYP4F22Q6NT55 531 aa13.7□□□□□ -0.22
SIN3B-210ENST00000599880 AIDAQ96BJ3 306 aa13.7□□□□□ -0.22
SIN3B-210ENST00000599880 MXD3Q9BW11 206 aa13.7□□□□□ -0.22
SIN3B-210ENST00000599880 NOB1Q9ULX3 412 aaKnown RBP13.7□□□□□ -0.22
SIN3B-210ENST00000599880 ASTN2O75129 1339 aaPredicted RBP13.69□□□□□ -0.22
SIN3B-210ENST00000599880 COL1A1P02452 1464 aaPredicted RBP13.69□□□□□ -0.22
SIN3B-210ENST00000599880 WNT10BO00744 389 aa13.69□□□□□ -0.22
SIN3B-210ENST00000599880 PLIN1O60240 522 aa13.69□□□□□ -0.22
SIN3B-210ENST00000599880 PAXIP1Q6ZW49 1069 aaPredicted RBP13.69□□□□□ -0.22
SIN3B-210ENST00000599880 PUS3Q9BZE2 481 aaKnown RBP13.69□□□□□ -0.22
SIN3B-210ENST00000599880 GBA2Q9HCG7 927 aaPredicted RBP13.69□□□□□ -0.22
SIN3B-210ENST00000599880 HDAC5Q9UQL6 1122 aa13.69□□□□□ -0.22
SIN3B-210ENST00000599880 FAM205AQ6ZU69 1335 aa13.68□□□□□ -0.22
SIN3B-210ENST00000599880 FOXN1O15353 648 aa13.68□□□□□ -0.22
SIN3B-210ENST00000599880 SASH1O94885 1247 aa13.68□□□□□ -0.22
SIN3B-210ENST00000599880 UBTFL1P0CB47 393 aaPredicted RBP13.68□□□□□ -0.22
SIN3B-210ENST00000599880 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
SIN3B-210ENST00000599880 HUNKP57058 714 aa13.68□□□□□ -0.22
SIN3B-210ENST00000599880 NBPF9Q3BBW0 867 aa13.68□□□□□ -0.22
SIN3B-210ENST00000599880 COL13A1Q5TAT6 717 aaPredicted RBP13.68□□□□□ -0.22
SIN3B-210ENST00000599880 KIAA0825Q8IV33 1275 aa13.68□□□□□ -0.22
SIN3B-210ENST00000599880 VGLL2Q8N8G2 317 aa13.68□□□□□ -0.22
SIN3B-210ENST00000599880 C2orf69Q8N8R5 385 aa13.68□□□□□ -0.22
SIN3B-210ENST00000599880 MTMR14Q8NCE2 650 aa13.68□□□□□ -0.22
SIN3B-210ENST00000599880 CDCA5Q96FF9 252 aa13.68□□□□□ -0.22
SIN3B-210ENST00000599880 ZBED3Q96IU2 234 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms