RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 PGAP2Q9UHJ9 254 aa18.04■□□□□ 0.48
IRF3-224ENST00000599680 ZNF609O15014 1411 aa18.04■□□□□ 0.48
IRF3-224ENST00000599680 UTYO14607 1347 aa18.03■□□□□ 0.48
IRF3-224ENST00000599680 PLIN1O60240 522 aa18.03■□□□□ 0.48
IRF3-224ENST00000599680 TAF5LO75529 589 aa18.03■□□□□ 0.48
IRF3-224ENST00000599680 FMR1Q06787 632 aaKnown RBP eCLIP18.03■□□□□ 0.48
IRF3-224ENST00000599680 DEFB115Q30KQ5 88 aa18.03■□□□□ 0.48
IRF3-224ENST00000599680 PAXIP1Q6ZW49 1069 aaPredicted RBP18.03■□□□□ 0.48
IRF3-224ENST00000599680 CDC37L1Q7L3B6 337 aa18.03■□□□□ 0.48
IRF3-224ENST00000599680 DCPSQ96C86 337 aaKnown RBP18.03■□□□□ 0.48
IRF3-224ENST00000599680 TXNRD3Q86VQ6 643 aa18.02■□□□□ 0.48
IRF3-224ENST00000599680 BICC1Q9H694 974 aaKnown RBP18.02■□□□□ 0.48
IRF3-224ENST00000599680 ZNF408Q9H9D4 720 aa18.02■□□□□ 0.48
IRF3-224ENST00000599680 MYH13Q9UKX3 1938 aa18.02■□□□□ 0.47
IRF3-224ENST00000599680 MYO3BQ8WXR4 1341 aa18.01■□□□□ 0.47
IRF3-224ENST00000599680 ECM29Q5VYK3 1845 aa18.01■□□□□ 0.47
IRF3-224ENST00000599680 CELF2O95319 508 aaKnown RBP18.01■□□□□ 0.47
IRF3-224ENST00000599680 USP17L8P0C7I0 530 aa18.01■□□□□ 0.47
IRF3-224ENST00000599680 HNRNPUQ00839 825 aaKnown RBP eCLIP18.01■□□□□ 0.47
IRF3-224ENST00000599680 ZNF804AQ7Z570 1209 aa18.01■□□□□ 0.47
IRF3-224ENST00000599680 API5Q9BZZ5 524 aaKnown RBP18.01■□□□□ 0.47
IRF3-224ENST00000599680 NOB1Q9ULX3 412 aaKnown RBP18.01■□□□□ 0.47
IRF3-224ENST00000599680 RASSF10A6NK89 507 aa18■□□□□ 0.47
IRF3-224ENST00000599680 EGFRP00533 1210 aa18■□□□□ 0.47
IRF3-224ENST00000599680 KLRK1P26718 216 aa18■□□□□ 0.47
IRF3-224ENST00000599680 VEGFBP49765 207 aa18■□□□□ 0.47
IRF3-224ENST00000599680 STRIP1Q5VSL9 837 aa18■□□□□ 0.47
IRF3-224ENST00000599680 KRT26Q7Z3Y9 468 aa18■□□□□ 0.47
IRF3-224ENST00000599680 USP48Q86UV5 1035 aa18■□□□□ 0.47
IRF3-224ENST00000599680 OGFOD1Q8N543 542 aa18■□□□□ 0.47
IRF3-224ENST00000599680 KIF16BQ96L93 1317 aa17.99■□□□□ 0.47
IRF3-224ENST00000599680 HSPA1AP0DMV8 641 aaKnown RBP17.99■□□□□ 0.47
IRF3-224ENST00000599680 HSPA1BP0DMV9 641 aaKnown RBP17.99■□□□□ 0.47
IRF3-224ENST00000599680 ZNF280AP59817 542 aaPredicted RBP17.99■□□□□ 0.47
IRF3-224ENST00000599680 TTLL5Q6EMB2 1281 aa17.99■□□□□ 0.47
IRF3-224ENST00000599680 KAZALD1Q96I82 304 aa17.99■□□□□ 0.47
IRF3-224ENST00000599680 MYOZ2Q9NPC6 264 aa17.99■□□□□ 0.47
IRF3-224ENST00000599680 GGA3Q9NZ52 723 aa17.99■□□□□ 0.47
IRF3-224ENST00000599680 ARAP2Q8WZ64 1704 aa17.98■□□□□ 0.47
IRF3-224ENST00000599680 SNAP23O00161 211 aa17.98■□□□□ 0.47
IRF3-224ENST00000599680 RARSP54136 660 aaKnown RBP17.98■□□□□ 0.47
IRF3-224ENST00000599680 GTF2IP78347 998 aa17.98■□□□□ 0.47
IRF3-224ENST00000599680 GRM1Q13255 1194 aa17.98■□□□□ 0.47
IRF3-224ENST00000599680 DACT2Q5SW24 774 aa17.98■□□□□ 0.47
IRF3-224ENST00000599680 CST9Q5W186 159 aa17.98■□□□□ 0.47
IRF3-224ENST00000599680 SULF1Q8IWU6 871 aa17.98■□□□□ 0.47
IRF3-224ENST00000599680 GMLQ99445 158 aa17.98■□□□□ 0.47
IRF3-224ENST00000599680 USP44Q9H0E7 712 aa17.98■□□□□ 0.47
IRF3-224ENST00000599680 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
IRF3-224ENST00000599680 UBTFL1P0CB47 393 aaPredicted RBP17.97■□□□□ 0.47
IRF3-224ENST00000599680 ECE1P42892 770 aa17.97■□□□□ 0.47
IRF3-224ENST00000599680 SCARF1Q14162 830 aa17.97■□□□□ 0.47
IRF3-224ENST00000599680 RABL6Q3YEC7 729 aaPredicted RBP17.97■□□□□ 0.47
IRF3-224ENST00000599680 C15orf52Q6ZUT6 534 aaKnown RBP17.97■□□□□ 0.47
IRF3-224ENST00000599680 MXD3Q9BW11 206 aa17.97■□□□□ 0.47
IRF3-224ENST00000599680 CD209Q9NNX6 404 aa17.97■□□□□ 0.47
IRF3-224ENST00000599680 HDAC9Q9UKV0 1011 aa17.97■□□□□ 0.47
IRF3-224ENST00000599680 TLL2Q9Y6L7 1015 aa17.97■□□□□ 0.47
IRF3-224ENST00000599680 WDR33Q9C0J8 1336 aaKnown RBP17.97■□□□□ 0.47
IRF3-224ENST00000599680 PCNTO95613 3336 aa17.97■□□□□ 0.47
IRF3-224ENST00000599680 BRPF1P55201 1214 aaPredicted RBP17.96■□□□□ 0.47
IRF3-224ENST00000599680 ANKRD44Q8N8A2 993 aa17.96■□□□□ 0.47
IRF3-224ENST00000599680 AIDAQ96BJ3 306 aa17.96■□□□□ 0.47
IRF3-224ENST00000599680 PUS3Q9BZE2 481 aaKnown RBP17.96■□□□□ 0.47
IRF3-224ENST00000599680 HDAC5Q9UQL6 1122 aa17.96■□□□□ 0.47
IRF3-224ENST00000599680 THSD7BQ9C0I4 1608 aa17.96■□□□□ 0.47
IRF3-224ENST00000599680 ADM5C9JUS6 153 aa17.95■□□□□ 0.46
IRF3-224ENST00000599680 MMP14P50281 582 aa17.95■□□□□ 0.46
IRF3-224ENST00000599680 UBE4AQ14139 1066 aa17.95■□□□□ 0.46
IRF3-224ENST00000599680 ANGEL2Q5VTE6 544 aaKnown RBP17.95■□□□□ 0.46
IRF3-224ENST00000599680 CAPNS2Q96L46 248 aa17.95■□□□□ 0.46
IRF3-224ENST00000599680 IPO8O15397 1037 aaKnown RBP17.94■□□□□ 0.46
IRF3-224ENST00000599680 METTL24Q5JXM2 366 aa17.94■□□□□ 0.46
IRF3-224ENST00000599680 KIAA0825Q8IV33 1275 aa17.94■□□□□ 0.46
IRF3-224ENST00000599680 ASTN2O75129 1339 aaPredicted RBP17.94■□□□□ 0.46
IRF3-224ENST00000599680 IRS2Q9Y4H2 1338 aa17.94■□□□□ 0.46
IRF3-224ENST00000599680 IL1R1P14778 569 aa17.93■□□□□ 0.46
IRF3-224ENST00000599680 CYP4F22Q6NT55 531 aa17.93■□□□□ 0.46
IRF3-224ENST00000599680 SAPCD2Q86UD0 394 aa17.93■□□□□ 0.46
IRF3-224ENST00000599680 VPS37DQ86XT2 251 aa17.93■□□□□ 0.46
IRF3-224ENST00000599680 C2orf69Q8N8R5 385 aa17.93■□□□□ 0.46
IRF3-224ENST00000599680 ARHGAP45Q92619 1136 aa17.93■□□□□ 0.46
IRF3-224ENST00000599680 FRAT1Q92837 279 aaPredicted RBP17.93■□□□□ 0.46
IRF3-224ENST00000599680 RIPOR2Q9Y4F9 1068 aa17.93■□□□□ 0.46
IRF3-224ENST00000599680 PITPNM2Q9BZ72 1349 aa17.93■□□□□ 0.46
IRF3-224ENST00000599680 LRRC24Q50LG9 513 aa17.92■□□□□ 0.46
IRF3-224ENST00000599680 DLK2Q6UY11 383 aa17.92■□□□□ 0.46
IRF3-224ENST00000599680 GBA2Q9HCG7 927 aaPredicted RBP17.92■□□□□ 0.46
IRF3-224ENST00000599680 HIBADHP31937 336 aaKnown RBP17.91■□□□□ 0.46
IRF3-224ENST00000599680 HUNKP57058 714 aa17.91■□□□□ 0.46
IRF3-224ENST00000599680 MAP2K1Q02750 393 aaPredicted RBP17.91■□□□□ 0.46
IRF3-224ENST00000599680 NBPF9Q3BBW0 867 aa17.91■□□□□ 0.46
IRF3-224ENST00000599680 KLHDC4Q8TBB5 520 aa17.91■□□□□ 0.46
IRF3-224ENST00000599680 HHIPL1Q96JK4 782 aa17.91■□□□□ 0.46
IRF3-224ENST00000599680 PAPPA2Q9BXP8 1791 aa17.9■□□□□ 0.46
IRF3-224ENST00000599680 SASH1O94885 1247 aa17.9■□□□□ 0.46
IRF3-224ENST00000599680 GYG1P46976 350 aa17.9■□□□□ 0.46
IRF3-224ENST00000599680 CAVIN4Q5BKX8 364 aa17.9■□□□□ 0.46
IRF3-224ENST00000599680 CDCA5Q96FF9 252 aa17.9■□□□□ 0.46
IRF3-224ENST00000599680 BEGAINQ9BUH8 593 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms