RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 RSBN1LQ6PCB5 846 aaPredicted RBP16.08■□□□□ 0.16
SH2D3A-208ENST00000599563 CDC37L1Q7L3B6 337 aa16.08■□□□□ 0.16
SH2D3A-208ENST00000599563 USP17L1Q7RTZ2 530 aa16.08■□□□□ 0.16
SH2D3A-208ENST00000599563 ARHGAP45Q92619 1136 aa16.08■□□□□ 0.16
SH2D3A-208ENST00000599563 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
SH2D3A-208ENST00000599563 MYO3BQ8WXR4 1341 aa16.08■□□□□ 0.16
SH2D3A-208ENST00000599563 RASSF10A6NK89 507 aa16.07■□□□□ 0.16
SH2D3A-208ENST00000599563 CHRNDQ07001 517 aa16.07■□□□□ 0.16
SH2D3A-208ENST00000599563 TMEM57Q8N5G2 664 aa16.07■□□□□ 0.16
SH2D3A-208ENST00000599563 TRPM4Q8TD43 1214 aa16.07■□□□□ 0.16
SH2D3A-208ENST00000599563 KCNQ5Q9NR82 932 aa16.07■□□□□ 0.16
SH2D3A-208ENST00000599563 MKRN1Q9UHC7 482 aaKnown RBP16.07■□□□□ 0.16
SH2D3A-208ENST00000599563 ABT1Q9ULW3 272 aaKnown RBP16.07■□□□□ 0.16
SH2D3A-208ENST00000599563 POLR2AP24928 1970 aaKnown RBP16.07■□□□□ 0.16
SH2D3A-208ENST00000599563 IPO8O15397 1037 aaKnown RBP16.06■□□□□ 0.16
SH2D3A-208ENST00000599563 HIRAP54198 1017 aaPredicted RBP16.06■□□□□ 0.16
SH2D3A-208ENST00000599563 IRX6P78412 446 aaPredicted RBP16.06■□□□□ 0.16
SH2D3A-208ENST00000599563 DEFB115Q30KQ5 88 aa16.06■□□□□ 0.16
SH2D3A-208ENST00000599563 LDHAL6AQ6ZMR3 332 aa16.06■□□□□ 0.16
SH2D3A-208ENST00000599563 C15orf52Q6ZUT6 534 aaKnown RBP16.06■□□□□ 0.16
SH2D3A-208ENST00000599563 DZIP1LQ8IYY4 767 aaKnown RBP16.06■□□□□ 0.16
SH2D3A-208ENST00000599563 CNNM1Q9NRU3 951 aa16.06■□□□□ 0.16
SH2D3A-208ENST00000599563 ZNF646O15015 1829 aaPredicted RBP16.05■□□□□ 0.16
SH2D3A-208ENST00000599563 USP17L8P0C7I0 530 aa16.05■□□□□ 0.16
SH2D3A-208ENST00000599563 ZNF280AP59817 542 aaPredicted RBP16.05■□□□□ 0.16
SH2D3A-208ENST00000599563 KIF4BQ2VIQ3 1234 aa16.05■□□□□ 0.16
SH2D3A-208ENST00000599563 TBC1D10BQ4KMP7 808 aaPredicted RBP16.05■□□□□ 0.16
SH2D3A-208ENST00000599563 STRIP1Q5VSL9 837 aa16.05■□□□□ 0.16
SH2D3A-208ENST00000599563 SAMD7Q7Z3H4 446 aa16.05■□□□□ 0.16
SH2D3A-208ENST00000599563 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.05■□□□□ 0.16
SH2D3A-208ENST00000599563 DCPSQ96C86 337 aaKnown RBP16.05■□□□□ 0.16
SH2D3A-208ENST00000599563 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
SH2D3A-208ENST00000599563 NBPF7P0C2Y1 421 aaPredicted RBP16.04■□□□□ 0.16
SH2D3A-208ENST00000599563 ECE1P42892 770 aa16.04■□□□□ 0.16
SH2D3A-208ENST00000599563 RABL6Q3YEC7 729 aaPredicted RBP16.04■□□□□ 0.16
SH2D3A-208ENST00000599563 EPHA10Q5JZY3 1008 aa16.04■□□□□ 0.16
SH2D3A-208ENST00000599563 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
SH2D3A-208ENST00000599563 OGFOD1Q8N543 542 aa16.04■□□□□ 0.16
SH2D3A-208ENST00000599563 SUCLG2Q96I99 432 aa16.04■□□□□ 0.16
SH2D3A-208ENST00000599563 GMLQ99445 158 aa16.04■□□□□ 0.16
SH2D3A-208ENST00000599563 SHTN1A0MZ66 631 aa16.03■□□□□ 0.16
SH2D3A-208ENST00000599563 TRAF5O00463 557 aa16.03■□□□□ 0.16
SH2D3A-208ENST00000599563 DACT2Q5SW24 774 aa16.03■□□□□ 0.16
SH2D3A-208ENST00000599563 ZNF804AQ7Z570 1209 aa16.03■□□□□ 0.16
SH2D3A-208ENST00000599563 GLIS2Q9BZE0 524 aaPredicted RBP16.03■□□□□ 0.16
SH2D3A-208ENST00000599563 COG6Q9Y2V7 657 aa16.03■□□□□ 0.16
SH2D3A-208ENST00000599563 CELF2O95319 508 aaKnown RBP16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 VEGFBP49765 207 aa16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 RBM26Q5T8P6 1007 aaKnown RBP16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 INTS3Q68E01 1043 aaKnown RBP16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 KRT26Q7Z3Y9 468 aa16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 SULF1Q8IWU6 871 aa16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 KAZALD1Q96I82 304 aa16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 HHIPL1Q96JK4 782 aa16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 CRBNQ96SW2 442 aa16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 BICC1Q9H694 974 aaKnown RBP16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 TLL2Q9Y6L7 1015 aa16.02■□□□□ 0.16
SH2D3A-208ENST00000599563 MROH5Q6ZUA9 1318 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 PITPNM2Q9BZ72 1349 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 WTIPA6NIX2 430 aaPredicted RBP16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 HSPA1AP0DMV8 641 aaKnown RBP16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 HSPA1BP0DMV9 641 aaKnown RBP16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 UBE4AQ14139 1066 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 PDE3AQ14432 1141 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 CST9Q5W186 159 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 TTLL5Q6EMB2 1281 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 USP48Q86UV5 1035 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 TXNRD3Q86VQ6 643 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 ITPRIPQ8IWB1 547 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 FBXW7Q969H0 707 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 USP44Q9H0E7 712 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 MYOZ2Q9NPC6 264 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 HDAC9Q9UKV0 1011 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 THSD7BQ9C0I4 1608 aa16.01■□□□□ 0.15
SH2D3A-208ENST00000599563 TAF5LO75529 589 aa16■□□□□ 0.15
SH2D3A-208ENST00000599563 EGFRP00533 1210 aa16■□□□□ 0.15
SH2D3A-208ENST00000599563 MVPQ14764 893 aaKnown RBP16■□□□□ 0.15
SH2D3A-208ENST00000599563 HELBQ8NG08 1087 aaPredicted RBP16■□□□□ 0.15
SH2D3A-208ENST00000599563 AIDAQ96BJ3 306 aa16■□□□□ 0.15
SH2D3A-208ENST00000599563 ZNF594Q96JF6 807 aaPredicted RBP16■□□□□ 0.15
SH2D3A-208ENST00000599563 MEIS3Q99687 375 aa16■□□□□ 0.15
SH2D3A-208ENST00000599563 CD209Q9NNX6 404 aa16■□□□□ 0.15
SH2D3A-208ENST00000599563 WDR33Q9C0J8 1336 aaKnown RBP15.99■□□□□ 0.15
SH2D3A-208ENST00000599563 IL1R1P14778 569 aa15.99■□□□□ 0.15
SH2D3A-208ENST00000599563 SAPCD2Q86UD0 394 aa15.99■□□□□ 0.15
SH2D3A-208ENST00000599563 GGA3Q9NZ52 723 aa15.99■□□□□ 0.15
SH2D3A-208ENST00000599563 ECM29Q5VYK3 1845 aa15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 IRS2Q9Y4H2 1338 aa15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 UBTFL1P0CB47 393 aaPredicted RBP15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 KLRK1P26718 216 aa15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 FKBP1AP62942 108 aaKnown RBP15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 GTF2IP78347 998 aa15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 MAP2K1Q02750 393 aaPredicted RBP15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 FMR1Q06787 632 aaKnown RBP eCLIP15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 SCARF1Q14162 830 aa15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 PAXIP1Q6ZW49 1069 aaPredicted RBP15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 ANKRD44Q8N8A2 993 aa15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 CAPNS2Q96L46 248 aa15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 ZNF408Q9H9D4 720 aa15.98■□□□□ 0.15
SH2D3A-208ENST00000599563 MS4A1P11836 297 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms