RNA–Protein interactions for RNA: ENST00000598706.1

RAB11B-203, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB11B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-203ENST00000598706 CRHR2Q13324 411 aa18.43■□□□□ 0.54
RAB11B-203ENST00000598706 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
RAB11B-203ENST00000598706 OGFOD1Q8N543 542 aa18.43■□□□□ 0.54
RAB11B-203ENST00000598706 ISCA1Q9BUE6 129 aa18.43■□□□□ 0.54
RAB11B-203ENST00000598706 IRS4O14654 1257 aaPredicted RBP18.42■□□□□ 0.54
RAB11B-203ENST00000598706 SASH1O94885 1247 aa18.42■□□□□ 0.54
RAB11B-203ENST00000598706 CAP1Q01518 475 aa18.42■□□□□ 0.54
RAB11B-203ENST00000598706 APOBEC3FQ8IUX4 373 aaKnown RBP18.42■□□□□ 0.54
RAB11B-203ENST00000598706 SLC10A4Q96EP9 437 aa18.42■□□□□ 0.54
RAB11B-203ENST00000598706 WNK4Q96J92 1243 aa18.42■□□□□ 0.54
RAB11B-203ENST00000598706 SEC31BQ9NQW1 1179 aa18.42■□□□□ 0.54
RAB11B-203ENST00000598706 FZD1Q9UP38 647 aa18.42■□□□□ 0.54
RAB11B-203ENST00000598706 COL1A1P02452 1464 aaPredicted RBP18.41■□□□□ 0.54
RAB11B-203ENST00000598706 ATP5J2-PTCD1G3V325 749 aa18.41■□□□□ 0.54
RAB11B-203ENST00000598706 SP3Q02447 781 aa18.41■□□□□ 0.54
RAB11B-203ENST00000598706 SLC4A8Q2Y0W8 1093 aa18.41■□□□□ 0.54
RAB11B-203ENST00000598706 SLC9C1Q4G0N8 1177 aa18.41■□□□□ 0.54
RAB11B-203ENST00000598706 PLBD2Q8NHP8 589 aa18.41■□□□□ 0.54
RAB11B-203ENST00000598706 PLEKHF1Q96S99 279 aa18.41■□□□□ 0.54
RAB11B-203ENST00000598706 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.41■□□□□ 0.54
RAB11B-203ENST00000598706 RBM27Q9P2N5 1060 aaKnown RBP18.41■□□□□ 0.54
RAB11B-203ENST00000598706 XDHP47989 1333 aa18.41■□□□□ 0.54
RAB11B-203ENST00000598706 OTUD7BQ6GQQ9 843 aa18.4■□□□□ 0.54
RAB11B-203ENST00000598706 NBPF11Q86T75 865 aa18.4■□□□□ 0.54
RAB11B-203ENST00000598706 MXD3Q9BW11 206 aa18.4■□□□□ 0.54
RAB11B-203ENST00000598706 MAP3K11Q16584 847 aa18.39■□□□□ 0.53
RAB11B-203ENST00000598706 DACT2Q5SW24 774 aa18.39■□□□□ 0.53
RAB11B-203ENST00000598706 CLMNQ96JQ2 1002 aa18.39■□□□□ 0.53
RAB11B-203ENST00000598706 MYO3BQ8WXR4 1341 aa18.39■□□□□ 0.53
RAB11B-203ENST00000598706 SSC5DA1L4H1 1573 aa18.38■□□□□ 0.53
RAB11B-203ENST00000598706 PTCH2Q9Y6C5 1203 aa18.38■□□□□ 0.53
RAB11B-203ENST00000598706 ECM29Q5VYK3 1845 aa18.37■□□□□ 0.53
RAB11B-203ENST00000598706 ATP2B4P23634 1241 aa18.37■□□□□ 0.53
RAB11B-203ENST00000598706 ANKRD13DQ6ZTN6 518 aa18.37■□□□□ 0.53
RAB11B-203ENST00000598706 FBXW7Q969H0 707 aa18.37■□□□□ 0.53
RAB11B-203ENST00000598706 CHPF2Q9P2E5 772 aa18.37■□□□□ 0.53
RAB11B-203ENST00000598706 MED23Q9ULK4 1368 aa18.37■□□□□ 0.53
RAB11B-203ENST00000598706 MYCP01106 439 aaPredicted RBP18.36■□□□□ 0.53
RAB11B-203ENST00000598706 MMP14P50281 582 aa18.36■□□□□ 0.53
RAB11B-203ENST00000598706 SPEF2Q9C093 1822 aa18.36■□□□□ 0.53
RAB11B-203ENST00000598706 BABAM1Q9NWV8 329 aa18.36■□□□□ 0.53
RAB11B-203ENST00000598706 MAPK8IP3Q9UPT6 1336 aa18.36■□□□□ 0.53
RAB11B-203ENST00000598706 PPP1R12BO60237 982 aaPredicted RBP18.35■□□□□ 0.53
RAB11B-203ENST00000598706 CCDC152Q4G0S7 254 aa18.35■□□□□ 0.53
RAB11B-203ENST00000598706 STRIP1Q5VSL9 837 aa18.35■□□□□ 0.53
RAB11B-203ENST00000598706 LAMA3Q16787 3333 aa18.35■□□□□ 0.53
RAB11B-203ENST00000598706 OTOFQ9HC10 1997 aa18.35■□□□□ 0.53
RAB11B-203ENST00000598706 UNCXA6NJT0 531 aa18.34■□□□□ 0.53
RAB11B-203ENST00000598706 HSP90B1P14625 803 aaKnown RBP18.34■□□□□ 0.53
RAB11B-203ENST00000598706 GJA5P36382 358 aa18.34■□□□□ 0.53
RAB11B-203ENST00000598706 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
RAB11B-203ENST00000598706 ARHGEF6Q15052 776 aa18.34■□□□□ 0.53
RAB11B-203ENST00000598706 ZBTB38Q8NAP3 1195 aaPredicted RBP18.34■□□□□ 0.53
RAB11B-203ENST00000598706 ZBED3Q96IU2 234 aaPredicted RBP18.34■□□□□ 0.53
RAB11B-203ENST00000598706 PTPN18Q99952 460 aa18.34■□□□□ 0.53
RAB11B-203ENST00000598706 DEFB129Q9H1M3 183 aa18.34■□□□□ 0.53
RAB11B-203ENST00000598706 TESPA1A2RU30 521 aaPredicted RBP18.33■□□□□ 0.52
RAB11B-203ENST00000598706 WTIPA6NIX2 430 aaPredicted RBP18.33■□□□□ 0.52
RAB11B-203ENST00000598706 ANKRD18AQ8IVF6 992 aa18.33■□□□□ 0.52
RAB11B-203ENST00000598706 DPF3Q92784 378 aa18.33■□□□□ 0.52
RAB11B-203ENST00000598706 ZSWIM8A7E2V4 1837 aa18.33■□□□□ 0.52
RAB11B-203ENST00000598706 MNX1P50219 401 aaPredicted RBP18.32■□□□□ 0.52
RAB11B-203ENST00000598706 KRT24Q2M2I5 525 aa18.32■□□□□ 0.52
RAB11B-203ENST00000598706 KIAA0825Q8IV33 1275 aa18.32■□□□□ 0.52
RAB11B-203ENST00000598706 CCDC85AQ96PX6 553 aaPredicted RBP18.32■□□□□ 0.52
RAB11B-203ENST00000598706 PRO3102Q9H379 93 aa18.32■□□□□ 0.52
RAB11B-203ENST00000598706 SH3TC2Q8TF17 1288 aa18.31■□□□□ 0.52
RAB11B-203ENST00000598706 PPP2R3BQ9Y5P8 575 aa18.31■□□□□ 0.52
RAB11B-203ENST00000598706 PDE8AO60658 829 aa18.3■□□□□ 0.52
RAB11B-203ENST00000598706 IREB2P48200 963 aaKnown RBP18.3■□□□□ 0.52
RAB11B-203ENST00000598706 HDGFL1Q5TGJ6 251 aa18.3■□□□□ 0.52
RAB11B-203ENST00000598706 SHISA4Q96DD7 197 aa18.3■□□□□ 0.52
RAB11B-203ENST00000598706 COA1Q9GZY4 146 aa18.3■□□□□ 0.52
RAB11B-203ENST00000598706 TTLL5Q6EMB2 1281 aa18.29■□□□□ 0.52
RAB11B-203ENST00000598706 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
RAB11B-203ENST00000598706 DBF4Q9UBU7 674 aaPredicted RBP18.29■□□□□ 0.52
RAB11B-203ENST00000598706 MYH3P11055 1940 aa18.29■□□□□ 0.52
RAB11B-203ENST00000598706 RIPK4P57078 832 aa18.28■□□□□ 0.52
RAB11B-203ENST00000598706 TAF1CQ15572 869 aaPredicted RBP18.28■□□□□ 0.52
RAB11B-203ENST00000598706 SUPT20HL1Q3ZLR7 823 aa18.28■□□□□ 0.52
RAB11B-203ENST00000598706 ANKRD13AQ8IZ07 590 aa18.28■□□□□ 0.52
RAB11B-203ENST00000598706 ZFYVE28Q9HCC9 887 aa18.28■□□□□ 0.52
RAB11B-203ENST00000598706 ZNF804BA4D1E1 1349 aa18.27■□□□□ 0.52
RAB11B-203ENST00000598706 CCT4P50991 539 aaKnown RBP18.27■□□□□ 0.52
RAB11B-203ENST00000598706 DLGAP5Q15398 846 aa18.27■□□□□ 0.52
RAB11B-203ENST00000598706 OPTNQ96CV9 577 aa18.27■□□□□ 0.52
RAB11B-203ENST00000598706 CDC5LQ99459 802 aaKnown RBP18.27■□□□□ 0.52
RAB11B-203ENST00000598706 HYPKQ9NX55 129 aa18.27■□□□□ 0.52
RAB11B-203ENST00000598706 USP2O75604 605 aaPredicted RBP18.26■□□□□ 0.51
RAB11B-203ENST00000598706 PCCAP05165 728 aaPredicted RBP18.26■□□□□ 0.51
RAB11B-203ENST00000598706 TXNRD3Q86VQ6 643 aa18.26■□□□□ 0.51
RAB11B-203ENST00000598706 MS4A4AQ96JQ5 239 aa18.26■□□□□ 0.51
RAB11B-203ENST00000598706 HTATIP2Q9BUP3 242 aa18.26■□□□□ 0.51
RAB11B-203ENST00000598706 MINPP1Q9UNW1 487 aa18.26■□□□□ 0.51
RAB11B-203ENST00000598706 UNC80Q8N2C7 3258 aa18.25■□□□□ 0.51
RAB11B-203ENST00000598706 A0A1W2PPC1 479 aa18.25■□□□□ 0.51
RAB11B-203ENST00000598706 SOX1O00570 391 aaPredicted RBP18.25■□□□□ 0.51
RAB11B-203ENST00000598706 HOXB7P09629 217 aa18.25■□□□□ 0.51
RAB11B-203ENST00000598706 GTF2IP78347 998 aa18.25■□□□□ 0.51
RAB11B-203ENST00000598706 LMOD3Q0VAK6 560 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms