RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 KLRK1P26718 216 aa20.93■□□□□ 0.94
USHBP1-208ENST00000598309 TXNRD3Q86VQ6 643 aa20.93■□□□□ 0.94
USHBP1-208ENST00000598309 IRS2Q9Y4H2 1338 aa20.93■□□□□ 0.94
USHBP1-208ENST00000598309 TMEM88BA6NKF7 163 aa20.92■□□□□ 0.94
USHBP1-208ENST00000598309 IPO8O15397 1037 aaKnown RBP20.92■□□□□ 0.94
USHBP1-208ENST00000598309 TAF5LO75529 589 aa20.92■□□□□ 0.94
USHBP1-208ENST00000598309 HIRAP54198 1017 aaPredicted RBP20.92■□□□□ 0.94
USHBP1-208ENST00000598309 UBTFL1P0CB47 393 aaPredicted RBP20.91■□□□□ 0.94
USHBP1-208ENST00000598309 ZNF280AP59817 542 aaPredicted RBP20.91■□□□□ 0.94
USHBP1-208ENST00000598309 STRIP1Q5VSL9 837 aa20.91■□□□□ 0.94
USHBP1-208ENST00000598309 SAMD7Q7Z3H4 446 aa20.91■□□□□ 0.94
USHBP1-208ENST00000598309 JMYQ8N9B5 988 aa20.91■□□□□ 0.94
USHBP1-208ENST00000598309 HELBQ8NG08 1087 aaPredicted RBP20.91■□□□□ 0.94
USHBP1-208ENST00000598309 MYO3BQ8WXR4 1341 aa20.91■□□□□ 0.94
USHBP1-208ENST00000598309 GMLQ99445 158 aa20.91■□□□□ 0.94
USHBP1-208ENST00000598309 HDAC5Q9UQL6 1122 aa20.91■□□□□ 0.94
USHBP1-208ENST00000598309 MROH5Q6ZUA9 1318 aa20.9■□□□□ 0.94
USHBP1-208ENST00000598309 DACT2Q5SW24 774 aa20.9■□□□□ 0.94
USHBP1-208ENST00000598309 INTS3Q68E01 1043 aaKnown RBP20.9■□□□□ 0.94
USHBP1-208ENST00000598309 UBE4AQ14139 1066 aa20.89■□□□□ 0.93
USHBP1-208ENST00000598309 KIF4BQ2VIQ3 1234 aa20.89■□□□□ 0.93
USHBP1-208ENST00000598309 TBC1D10BQ4KMP7 808 aaPredicted RBP20.89■□□□□ 0.93
USHBP1-208ENST00000598309 ATF7IPQ6VMQ6 1270 aa20.89■□□□□ 0.93
USHBP1-208ENST00000598309 ZNF804AQ7Z570 1209 aa20.89■□□□□ 0.93
USHBP1-208ENST00000598309 CD209Q9NNX6 404 aa20.89■□□□□ 0.93
USHBP1-208ENST00000598309 RIPOR2Q9Y4F9 1068 aa20.89■□□□□ 0.93
USHBP1-208ENST00000598309 SNAP23O00161 211 aa20.88■□□□□ 0.93
USHBP1-208ENST00000598309 BCAR3O75815 825 aa20.88■□□□□ 0.93
USHBP1-208ENST00000598309 USP17L8P0C7I0 530 aa20.88■□□□□ 0.93
USHBP1-208ENST00000598309 TRIM27P14373 513 aa20.88■□□□□ 0.93
USHBP1-208ENST00000598309 PUS3Q9BZE2 481 aaKnown RBP20.88■□□□□ 0.93
USHBP1-208ENST00000598309 ZNF646O15015 1829 aaPredicted RBP20.88■□□□□ 0.93
USHBP1-208ENST00000598309 CNTNAP1P78357 1384 aa20.87■□□□□ 0.93
USHBP1-208ENST00000598309 EGFRP00533 1210 aa20.87■□□□□ 0.93
USHBP1-208ENST00000598309 MMP14P50281 582 aa20.87■□□□□ 0.93
USHBP1-208ENST00000598309 CDC37L1Q7L3B6 337 aa20.87■□□□□ 0.93
USHBP1-208ENST00000598309 TRAF5O00463 557 aa20.86■□□□□ 0.93
USHBP1-208ENST00000598309 PLIN1O60240 522 aa20.86■□□□□ 0.93
USHBP1-208ENST00000598309 IL1R1P14778 569 aa20.86■□□□□ 0.93
USHBP1-208ENST00000598309 TTLL5Q6EMB2 1281 aa20.86■□□□□ 0.93
USHBP1-208ENST00000598309 GLIS2Q9BZE0 524 aaPredicted RBP20.86■□□□□ 0.93
USHBP1-208ENST00000598309 RFX5P48382 616 aaPredicted RBP20.85■□□□□ 0.93
USHBP1-208ENST00000598309 RBM26Q5T8P6 1007 aaKnown RBP20.85■□□□□ 0.93
USHBP1-208ENST00000598309 FRAT1Q92837 279 aaPredicted RBP20.85■□□□□ 0.93
USHBP1-208ENST00000598309 FBXW7Q969H0 707 aa20.85■□□□□ 0.93
USHBP1-208ENST00000598309 MEIS3Q99687 375 aa20.85■□□□□ 0.93
USHBP1-208ENST00000598309 RASSF10A6NK89 507 aa20.84■□□□□ 0.93
USHBP1-208ENST00000598309 GNAI3P08754 354 aa20.84■□□□□ 0.93
USHBP1-208ENST00000598309 LRRC24Q50LG9 513 aa20.84■□□□□ 0.93
USHBP1-208ENST00000598309 METTL24Q5JXM2 366 aa20.84■□□□□ 0.93
USHBP1-208ENST00000598309 ZKSCAN2Q63HK3 967 aa20.84■□□□□ 0.93
USHBP1-208ENST00000598309 OGFOD1Q8N543 542 aa20.84■□□□□ 0.93
USHBP1-208ENST00000598309 VGLL2Q8N8G2 317 aa20.84■□□□□ 0.93
USHBP1-208ENST00000598309 MYOZ2Q9NPC6 264 aa20.84■□□□□ 0.93
USHBP1-208ENST00000598309 MKRN1Q9UHC7 482 aaKnown RBP20.84■□□□□ 0.93
USHBP1-208ENST00000598309 LRRFIP2Q9Y608 721 aaKnown RBP20.84■□□□□ 0.93
USHBP1-208ENST00000598309 EYA2O00167 538 aa20.83■□□□□ 0.93
USHBP1-208ENST00000598309 GTF2IP78347 998 aa20.83■□□□□ 0.93
USHBP1-208ENST00000598309 KLHDC4Q8TBB5 520 aa20.83■□□□□ 0.93
USHBP1-208ENST00000598309 DCPSQ96C86 337 aaKnown RBP20.83■□□□□ 0.93
USHBP1-208ENST00000598309 MXD3Q9BW11 206 aa20.83■□□□□ 0.93
USHBP1-208ENST00000598309 FBXO3Q9UK99 471 aa20.83■□□□□ 0.93
USHBP1-208ENST00000598309 TRPM7Q96QT4 1865 aa20.83■□□□□ 0.92
USHBP1-208ENST00000598309 PDE8BO95263 885 aa20.82■□□□□ 0.92
USHBP1-208ENST00000598309 FKBP1AP62942 108 aaKnown RBP20.82■□□□□ 0.92
USHBP1-208ENST00000598309 PTPN12Q05209 780 aaKnown RBP20.82■□□□□ 0.92
USHBP1-208ENST00000598309 FMR1Q06787 632 aaKnown RBP eCLIP20.82■□□□□ 0.92
USHBP1-208ENST00000598309 CST9Q5W186 159 aa20.82■□□□□ 0.92
USHBP1-208ENST00000598309 KRT26Q7Z3Y9 468 aa20.82■□□□□ 0.92
USHBP1-208ENST00000598309 GGA3Q9NZ52 723 aa20.82■□□□□ 0.92
USHBP1-208ENST00000598309 CELF2O95319 508 aaKnown RBP20.81■□□□□ 0.92
USHBP1-208ENST00000598309 HIBADHP31937 336 aaKnown RBP20.81■□□□□ 0.92
USHBP1-208ENST00000598309 HDAC9Q9UKV0 1011 aa20.81■□□□□ 0.92
USHBP1-208ENST00000598309 ABT1Q9ULW3 272 aaKnown RBP20.81■□□□□ 0.92
USHBP1-208ENST00000598309 PITPNM2Q9BZ72 1349 aa20.8■□□□□ 0.92
USHBP1-208ENST00000598309 CIAO1O76071 339 aa20.8■□□□□ 0.92
USHBP1-208ENST00000598309 SASH1O94885 1247 aa20.8■□□□□ 0.92
USHBP1-208ENST00000598309 SCARF1Q14162 830 aa20.8■□□□□ 0.92
USHBP1-208ENST00000598309 USP48Q86UV5 1035 aa20.8■□□□□ 0.92
USHBP1-208ENST00000598309 SULF1Q8IWU6 871 aa20.8■□□□□ 0.92
USHBP1-208ENST00000598309 TDRD7Q8NHU6 1098 aaKnown RBP20.8■□□□□ 0.92
USHBP1-208ENST00000598309 FAM84BQ96KN1 310 aaPredicted RBP20.8■□□□□ 0.92
USHBP1-208ENST00000598309 TNNQ9UQP3 1299 aa20.8■□□□□ 0.92
USHBP1-208ENST00000598309 GYG1P46976 350 aa20.79■□□□□ 0.92
USHBP1-208ENST00000598309 MTX1Q13505 466 aa20.79■□□□□ 0.92
USHBP1-208ENST00000598309 PUM3Q15397 648 aaKnown RBP20.79■□□□□ 0.92
USHBP1-208ENST00000598309 DEFB115Q30KQ5 88 aa20.79■□□□□ 0.92
USHBP1-208ENST00000598309 CLUAP1Q96AJ1 413 aa20.79■□□□□ 0.92
USHBP1-208ENST00000598309 TLL2Q9Y6L7 1015 aa20.79■□□□□ 0.92
USHBP1-208ENST00000598309 FAM205AQ6ZU69 1335 aa20.78■□□□□ 0.92
USHBP1-208ENST00000598309 ANGEL2Q5VTE6 544 aaKnown RBP20.78■□□□□ 0.92
USHBP1-208ENST00000598309 ATG9AQ7Z3C6 839 aa20.78■□□□□ 0.92
USHBP1-208ENST00000598309 FBXO33Q7Z6M2 555 aa20.78■□□□□ 0.92
USHBP1-208ENST00000598309 KIAA0825Q8IV33 1275 aa20.78■□□□□ 0.92
USHBP1-208ENST00000598309 CERS5Q8N5B7 392 aa20.78■□□□□ 0.92
USHBP1-208ENST00000598309 COPRSQ9NQ92 184 aa20.78■□□□□ 0.92
USHBP1-208ENST00000598309 ASTN2O75129 1339 aaPredicted RBP20.78■□□□□ 0.92
USHBP1-208ENST00000598309 ADM5C9JUS6 153 aa20.77■□□□□ 0.92
USHBP1-208ENST00000598309 FGFR2P21802 821 aa20.77■□□□□ 0.92
USHBP1-208ENST00000598309 VEGFBP49765 207 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms