RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 FGFR2P21802 821 aa27.28■■□□□ 1.96
CHMP2A-204ENST00000597848 TXNRD3Q86VQ6 643 aa27.28■■□□□ 1.96
CHMP2A-204ENST00000597848 RHPN1Q8TCX5 695 aa27.28■■□□□ 1.96
CHMP2A-204ENST00000597848 KIF1BPQ96EK5 621 aa27.28■■□□□ 1.96
CHMP2A-204ENST00000597848 NEUROD6Q96NK8 337 aa27.28■■□□□ 1.96
CHMP2A-204ENST00000597848 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.28■■□□□ 1.96
CHMP2A-204ENST00000597848 TIMM10P62072 90 aa27.27■■□□□ 1.96
CHMP2A-204ENST00000597848 DBNDD1Q9H9R9 158 aa27.27■■□□□ 1.96
CHMP2A-204ENST00000597848 C15orf52Q6ZUT6 534 aaKnown RBP27.26■■□□□ 1.95
CHMP2A-204ENST00000597848 A0A1B0GUL7 405 aa27.25■■□□□ 1.95
CHMP2A-204ENST00000597848 IGHDP01880 384 aa27.25■■□□□ 1.95
CHMP2A-204ENST00000597848 GYG1P46976 350 aa27.25■■□□□ 1.95
CHMP2A-204ENST00000597848 CAVIN4Q5BKX8 364 aa27.25■■□□□ 1.95
CHMP2A-204ENST00000597848 ZNF804AQ7Z570 1209 aa27.25■■□□□ 1.95
CHMP2A-204ENST00000597848 IL1RAPL2Q9NP60 686 aa27.25■■□□□ 1.95
CHMP2A-204ENST00000597848 TNNI3KQ59H18 835 aa27.24■■□□□ 1.95
CHMP2A-204ENST00000597848 VPS37DQ86XT2 251 aa27.24■■□□□ 1.95
CHMP2A-204ENST00000597848 LRRCC1Q9C099 1032 aa27.24■■□□□ 1.95
CHMP2A-204ENST00000597848 GPR108Q9NPR9 543 aa27.24■■□□□ 1.95
CHMP2A-204ENST00000597848 ZNRF3Q9ULT6 936 aa27.24■■□□□ 1.95
CHMP2A-204ENST00000597848 FPGT-TNNI3KV9GXZ4 949 aa27.24■■□□□ 1.95
CHMP2A-204ENST00000597848 IRS2Q9Y4H2 1338 aa27.23■■□□□ 1.95
CHMP2A-204ENST00000597848 A0A1B0GUL6 1792 aa27.23■■□□□ 1.95
CHMP2A-204ENST00000597848 ECE2O60344 883 aa27.23■■□□□ 1.95
CHMP2A-204ENST00000597848 HIBADHP31937 336 aaKnown RBP27.23■■□□□ 1.95
CHMP2A-204ENST00000597848 GCC1Q96CN9 775 aa27.23■■□□□ 1.95
CHMP2A-204ENST00000597848 FAM84BQ96KN1 310 aaPredicted RBP27.23■■□□□ 1.95
CHMP2A-204ENST00000597848 COA1Q9GZY4 146 aa27.23■■□□□ 1.95
CHMP2A-204ENST00000597848 GOLGB1Q14789 3259 aaKnown RBP27.23■■□□□ 1.95
CHMP2A-204ENST00000597848 ADORA1P30542 326 aa27.22■■□□□ 1.95
CHMP2A-204ENST00000597848 GORABQ5T7V8 394 aa27.22■■□□□ 1.95
CHMP2A-204ENST00000597848 CLASRPQ8N2M8 674 aaKnown RBP27.22■■□□□ 1.95
CHMP2A-204ENST00000597848 SBF1O95248 1867 aa27.21■■□□□ 1.95
CHMP2A-204ENST00000597848 SMARCA5O60264 1052 aaPredicted RBP27.21■■□□□ 1.95
CHMP2A-204ENST00000597848 BCAMP50895 628 aa27.21■■□□□ 1.95
CHMP2A-204ENST00000597848 AACSQ86V21 672 aa27.21■■□□□ 1.95
CHMP2A-204ENST00000597848 XAGE2Q96GT9 111 aa27.21■■□□□ 1.95
CHMP2A-204ENST00000597848 ZBTB47Q9UFB7 747 aaPredicted RBP27.21■■□□□ 1.95
CHMP2A-204ENST00000597848 EIF6P56537 245 aaKnown RBP27.2■■□□□ 1.94
CHMP2A-204ENST00000597848 CCDC88AQ3V6T2 1871 aa27.2■■□□□ 1.94
CHMP2A-204ENST00000597848 PODNQ7Z5L7 613 aa27.2■■□□□ 1.94
CHMP2A-204ENST00000597848 FBXO33Q7Z6M2 555 aa27.2■■□□□ 1.94
CHMP2A-204ENST00000597848 EAF2Q96CJ1 260 aaPredicted RBP27.2■■□□□ 1.94
CHMP2A-204ENST00000597848 CCDC8Q9H0W5 538 aaPredicted RBP27.2■■□□□ 1.94
CHMP2A-204ENST00000597848 CD209Q9NNX6 404 aa27.2■■□□□ 1.94
CHMP2A-204ENST00000597848 COL4A5P29400 1685 aa27.2■■□□□ 1.94
CHMP2A-204ENST00000597848 ZNF609O15014 1411 aa27.19■■□□□ 1.94
CHMP2A-204ENST00000597848 FZD9O00144 591 aa27.19■■□□□ 1.94
CHMP2A-204ENST00000597848 YDJCA8MPS7 323 aa27.18■■□□□ 1.94
CHMP2A-204ENST00000597848 ANKRD45Q5TZF3 282 aa27.18■■□□□ 1.94
CHMP2A-204ENST00000597848 FRAT2O75474 233 aaPredicted RBP27.17■■□□□ 1.94
CHMP2A-204ENST00000597848 RAD17O75943 681 aa27.17■■□□□ 1.94
CHMP2A-204ENST00000597848 IFIT2P09913 472 aaKnown RBP27.17■■□□□ 1.94
CHMP2A-204ENST00000597848 ERICH6BQ5W0A0 696 aa27.17■■□□□ 1.94
CHMP2A-204ENST00000597848 FBXW7Q969H0 707 aa27.17■■□□□ 1.94
CHMP2A-204ENST00000597848 DBNDD2Q9BQY9 259 aa27.17■■□□□ 1.94
CHMP2A-204ENST00000597848 KCNQ5Q9NR82 932 aa27.17■■□□□ 1.94
CHMP2A-204ENST00000597848 GNL3LQ9NVN8 582 aaKnown RBP27.17■■□□□ 1.94
CHMP2A-204ENST00000597848 IQSEC3Q9UPP2 1182 aaPredicted RBP27.17■■□□□ 1.94
CHMP2A-204ENST00000597848 B4GALNT3Q6L9W6 998 aa27.16■■□□□ 1.94
CHMP2A-204ENST00000597848 SMC5Q8IY18 1101 aa27.16■■□□□ 1.94
CHMP2A-204ENST00000597848 ZC3H4Q9UPT8 1303 aaKnown RBP27.16■■□□□ 1.94
CHMP2A-204ENST00000597848 IL1R1P14778 569 aa27.15■■□□□ 1.94
CHMP2A-204ENST00000597848 PHKA1P46020 1223 aa27.15■■□□□ 1.94
CHMP2A-204ENST00000597848 CXCL9Q07325 125 aa27.15■■□□□ 1.94
CHMP2A-204ENST00000597848 CCDC102BQ68D86 513 aa27.15■■□□□ 1.94
CHMP2A-204ENST00000597848 CIAPIN1Q6FI81 312 aa27.15■■□□□ 1.94
CHMP2A-204ENST00000597848 DPY19L2Q6NUT2 758 aa27.15■■□□□ 1.94
CHMP2A-204ENST00000597848 CCDC136Q96JN2 1154 aa27.15■■□□□ 1.94
CHMP2A-204ENST00000597848 TLR7Q9NYK1 1049 aaKnown RBP27.15■■□□□ 1.94
CHMP2A-204ENST00000597848 ZNF541Q9H0D2 1346 aa27.15■■□□□ 1.94
CHMP2A-204ENST00000597848 TNIP1Q15025 636 aa27.14■■□□□ 1.94
CHMP2A-204ENST00000597848 CCDC158Q5M9N0 1113 aa27.14■■□□□ 1.94
CHMP2A-204ENST00000597848 TDRD7Q8NHU6 1098 aaKnown RBP27.14■■□□□ 1.94
CHMP2A-204ENST00000597848 DBNLQ9UJU6 430 aaKnown RBP27.14■■□□□ 1.94
CHMP2A-204ENST00000597848 GJA3Q9Y6H8 435 aa27.14■■□□□ 1.94
CHMP2A-204ENST00000597848 DICER1Q9UPY3 1922 aaKnown RBP27.13■■□□□ 1.93
CHMP2A-204ENST00000597848 USP17L3A6NCW0 530 aa27.12■■□□□ 1.93
CHMP2A-204ENST00000597848 USP17L4A6NCW7 530 aa27.12■■□□□ 1.93
CHMP2A-204ENST00000597848 GTF2IP78347 998 aa27.12■■□□□ 1.93
CHMP2A-204ENST00000597848 TTC39AQ5SRH9 613 aa27.12■■□□□ 1.93
CHMP2A-204ENST00000597848 TTLL5Q6EMB2 1281 aa27.12■■□□□ 1.93
CHMP2A-204ENST00000597848 USP17L1Q7RTZ2 530 aa27.12■■□□□ 1.93
CHMP2A-204ENST00000597848 PSMD14O00487 310 aa27.11■■□□□ 1.93
CHMP2A-204ENST00000597848 CHAF1AQ13111 956 aaPredicted RBP27.11■■□□□ 1.93
CHMP2A-204ENST00000597848 JAG2Q9Y219 1238 aa27.11■■□□□ 1.93
CHMP2A-204ENST00000597848 CHD4Q14839 1912 aa27.11■■□□□ 1.93
CHMP2A-204ENST00000597848 DDNO94850 711 aaPredicted RBP27.1■■□□□ 1.93
CHMP2A-204ENST00000597848 GLTPD2A6NH11 291 aa27.09■■□□□ 1.93
CHMP2A-204ENST00000597848 UQCRFS1P1P0C7P4 283 aa27.09■■□□□ 1.93
CHMP2A-204ENST00000597848 STRIP1Q5VSL9 837 aa27.09■■□□□ 1.93
CHMP2A-204ENST00000597848 GPC2Q8N158 579 aa27.09■■□□□ 1.93
CHMP2A-204ENST00000597848 PPP4R2Q9NY27 417 aa27.09■■□□□ 1.93
CHMP2A-204ENST00000597848 TIAM2Q8IVF5 1701 aa27.09■■□□□ 1.93
CHMP2A-204ENST00000597848 C16orf71Q8IYS4 520 aaPredicted RBP27.08■■□□□ 1.93
CHMP2A-204ENST00000597848 LNPKQ9C0E8 428 aa27.08■■□□□ 1.93
CHMP2A-204ENST00000597848 DENND2AQ9ULE3 1009 aa27.08■■□□□ 1.93
CHMP2A-204ENST00000597848 SEMA3EO15041 775 aa27.07■■□□□ 1.92
CHMP2A-204ENST00000597848 VIL1P09327 827 aaKnown RBP27.07■■□□□ 1.92
CHMP2A-204ENST00000597848 YY1P25490 414 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms