RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 USP17L1Q7RTZ2 530 aa15.96■□□□□ 0.15
UPF1-203ENST00000594504 PODNQ7Z5L7 613 aa15.96■□□□□ 0.15
UPF1-203ENST00000594504 SULF1Q8IWU6 871 aa15.96■□□□□ 0.15
UPF1-203ENST00000594504 CASP8AP2Q9UKL3 1982 aa15.96■□□□□ 0.15
UPF1-203ENST00000594504 PSME4Q14997 1843 aa15.96■□□□□ 0.14
UPF1-203ENST00000594504 VAMP4O75379 141 aa15.95■□□□□ 0.14
UPF1-203ENST00000594504 USP17L8P0C7I0 530 aa15.95■□□□□ 0.14
UPF1-203ENST00000594504 CASP7P55210 303 aa15.95■□□□□ 0.14
UPF1-203ENST00000594504 FBXW7Q969H0 707 aa15.95■□□□□ 0.14
UPF1-203ENST00000594504 CDCA5Q96FF9 252 aa15.95■□□□□ 0.14
UPF1-203ENST00000594504 MYOZ2Q9NPC6 264 aa15.95■□□□□ 0.14
UPF1-203ENST00000594504 FANCIQ9NVI1 1328 aa15.94■□□□□ 0.14
UPF1-203ENST00000594504 ITGA6P23229 1130 aa15.94■□□□□ 0.14
UPF1-203ENST00000594504 KLRK1P26718 216 aa15.94■□□□□ 0.14
UPF1-203ENST00000594504 ZNF157P51786 506 aaPredicted RBP15.94■□□□□ 0.14
UPF1-203ENST00000594504 KIF23Q02241 960 aaPredicted RBP15.94■□□□□ 0.14
UPF1-203ENST00000594504 EXOSC9Q06265 439 aaKnown RBP15.94■□□□□ 0.14
UPF1-203ENST00000594504 NOGQ13253 232 aa15.94■□□□□ 0.14
UPF1-203ENST00000594504 FKBP5Q13451 457 aaPredicted RBP15.94■□□□□ 0.14
UPF1-203ENST00000594504 PRAMEF18Q5VWM3 479 aa15.94■□□□□ 0.14
UPF1-203ENST00000594504 DNAAF4Q8WXU2 420 aa15.94■□□□□ 0.14
UPF1-203ENST00000594504 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
UPF1-203ENST00000594504 ZNF521Q96K83 1311 aa15.94■□□□□ 0.14
UPF1-203ENST00000594504 CCDC85CA6NKD9 419 aa15.93■□□□□ 0.14
UPF1-203ENST00000594504 IGHMBP2P38935 993 aaKnown RBP15.93■□□□□ 0.14
UPF1-203ENST00000594504 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
UPF1-203ENST00000594504 NBPF9Q3BBW0 867 aa15.93■□□□□ 0.14
UPF1-203ENST00000594504 MOB2Q70IA6 237 aa15.93■□□□□ 0.14
UPF1-203ENST00000594504 PLA2G12BQ9BX93 195 aa15.93■□□□□ 0.14
UPF1-203ENST00000594504 MED23Q9ULK4 1368 aa15.92■□□□□ 0.14
UPF1-203ENST00000594504 F6X3S4 739 aa15.92■□□□□ 0.14
UPF1-203ENST00000594504 SNAP23O00161 211 aa15.92■□□□□ 0.14
UPF1-203ENST00000594504 CSF1RP07333 972 aa15.92■□□□□ 0.14
UPF1-203ENST00000594504 DACT2Q5SW24 774 aa15.92■□□□□ 0.14
UPF1-203ENST00000594504 CA12O43570 354 aa15.91■□□□□ 0.14
UPF1-203ENST00000594504 LINS1Q8NG48 757 aa15.91■□□□□ 0.14
UPF1-203ENST00000594504 CCDC102AQ96A19 550 aa15.91■□□□□ 0.14
UPF1-203ENST00000594504 MPHOSPH8Q99549 860 aa15.91■□□□□ 0.14
UPF1-203ENST00000594504 MCOLN1Q9GZU1 580 aa15.91■□□□□ 0.14
UPF1-203ENST00000594504 COA1Q9GZY4 146 aa15.91■□□□□ 0.14
UPF1-203ENST00000594504 MYH16Q9H6N6 1097 aa15.91■□□□□ 0.14
UPF1-203ENST00000594504 LEMD3Q9Y2U8 911 aa15.91■□□□□ 0.14
UPF1-203ENST00000594504 ZNF646O15015 1829 aaPredicted RBP15.91■□□□□ 0.14
UPF1-203ENST00000594504 ZNF804BA4D1E1 1349 aa15.91■□□□□ 0.14
UPF1-203ENST00000594504 SLC10A3P09131 477 aa15.9■□□□□ 0.14
UPF1-203ENST00000594504 CHRNDQ07001 517 aa15.9■□□□□ 0.14
UPF1-203ENST00000594504 HELBQ8NG08 1087 aaPredicted RBP15.9■□□□□ 0.14
UPF1-203ENST00000594504 CSRNP1Q96S65 589 aa15.9■□□□□ 0.14
UPF1-203ENST00000594504 ZNF609O15014 1411 aa15.9■□□□□ 0.14
UPF1-203ENST00000594504 UBE2Q2LH0YL09 131 aa15.89■□□□□ 0.13
UPF1-203ENST00000594504 TAF5LO75529 589 aa15.89■□□□□ 0.13
UPF1-203ENST00000594504 TRPA1O75762 1119 aa15.89■□□□□ 0.13
UPF1-203ENST00000594504 FOXO4P98177 505 aa15.89■□□□□ 0.13
UPF1-203ENST00000594504 DGKZQ13574 1117 aa15.89■□□□□ 0.13
UPF1-203ENST00000594504 STRIP1Q5VSL9 837 aa15.89■□□□□ 0.13
UPF1-203ENST00000594504 TTLL5Q6EMB2 1281 aa15.89■□□□□ 0.13
UPF1-203ENST00000594504 RNF186Q9NXI6 227 aa15.89■□□□□ 0.13
UPF1-203ENST00000594504 ANKRD18BA2A2Z9 1011 aa15.88■□□□□ 0.13
UPF1-203ENST00000594504 WNT10BO00744 389 aa15.88■□□□□ 0.13
UPF1-203ENST00000594504 SASH1O94885 1247 aa15.88■□□□□ 0.13
UPF1-203ENST00000594504 GTF2IP78347 998 aa15.88■□□□□ 0.13
UPF1-203ENST00000594504 BEND3Q5T5X7 828 aa15.88■□□□□ 0.13
UPF1-203ENST00000594504 RASAL3Q86YV0 1011 aa15.88■□□□□ 0.13
UPF1-203ENST00000594504 ANKRD2Q9GZV1 360 aa15.88■□□□□ 0.13
UPF1-203ENST00000594504 CHMP3Q9Y3E7 222 aa15.88■□□□□ 0.13
UPF1-203ENST00000594504 CACNA1FO60840 1977 aa15.87■□□□□ 0.13
UPF1-203ENST00000594504 EPHA10Q5JZY3 1008 aa15.87■□□□□ 0.13
UPF1-203ENST00000594504 KIAA0825Q8IV33 1275 aa15.87■□□□□ 0.13
UPF1-203ENST00000594504 OGFOD1Q8N543 542 aa15.87■□□□□ 0.13
UPF1-203ENST00000594504 ZNF594Q96JF6 807 aaPredicted RBP15.87■□□□□ 0.13
UPF1-203ENST00000594504 PITPNM2Q9BZ72 1349 aa15.87■□□□□ 0.13
UPF1-203ENST00000594504 E9PSI1 815 aa15.86■□□□□ 0.13
UPF1-203ENST00000594504 KCNJ4P48050 445 aa15.86■□□□□ 0.13
UPF1-203ENST00000594504 CD209Q9NNX6 404 aa15.86■□□□□ 0.13
UPF1-203ENST00000594504 AKAP11Q9UKA4 1901 aa15.86■□□□□ 0.13
UPF1-203ENST00000594504 PLIN1O60240 522 aa15.85■□□□□ 0.13
UPF1-203ENST00000594504 IFIT5Q13325 482 aaKnown RBP15.85■□□□□ 0.13
UPF1-203ENST00000594504 PRKG1Q13976 671 aa15.85■□□□□ 0.13
UPF1-203ENST00000594504 TTLL12Q14166 644 aaPredicted RBP15.85■□□□□ 0.13
UPF1-203ENST00000594504 LMBR1LQ6UX01 489 aa15.85■□□□□ 0.13
UPF1-203ENST00000594504 PCDHAC2Q9Y5I4 1007 aa15.85■□□□□ 0.13
UPF1-203ENST00000594504 MYO3BQ8WXR4 1341 aa15.85■□□□□ 0.13
UPF1-203ENST00000594504 IRS2Q9Y4H2 1338 aa15.85■□□□□ 0.13
UPF1-203ENST00000594504 FKBP1BP68106 108 aa15.84■□□□□ 0.13
UPF1-203ENST00000594504 MKRN3Q13064 507 aaKnown RBP15.84■□□□□ 0.13
UPF1-203ENST00000594504 CERS5Q8N5B7 392 aa15.84■□□□□ 0.13
UPF1-203ENST00000594504 SAGE1Q9NXZ1 904 aa15.84■□□□□ 0.13
UPF1-203ENST00000594504 FZD1Q9UP38 647 aa15.84■□□□□ 0.13
UPF1-203ENST00000594504 JAG2Q9Y219 1238 aa15.84■□□□□ 0.13
UPF1-203ENST00000594504 PAPPA2Q9BXP8 1791 aa15.83■□□□□ 0.12
UPF1-203ENST00000594504 F8W031 263 aaPredicted RBP15.83■□□□□ 0.12
UPF1-203ENST00000594504 SLFN5Q08AF3 891 aa15.83■□□□□ 0.12
UPF1-203ENST00000594504 SLC4A10Q6U841 1118 aa15.83■□□□□ 0.12
UPF1-203ENST00000594504 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.83■□□□□ 0.12
UPF1-203ENST00000594504 HDAC9Q9UKV0 1011 aa15.83■□□□□ 0.12
UPF1-203ENST00000594504 ZBED3Q96IU2 234 aaPredicted RBP15.82■□□□□ 0.12
UPF1-203ENST00000594504 A0A1B0GUL6 1792 aa15.81■□□□□ 0.12
UPF1-203ENST00000594504 GRM8O00222 908 aa15.81■□□□□ 0.12
UPF1-203ENST00000594504 TBC1D8O95759 1140 aa15.81■□□□□ 0.12
UPF1-203ENST00000594504 RGS19P49795 217 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms