RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 ANO3Q9BYT9 981 aa20.78■□□□□ 0.92
SYNM-204ENST00000594047 MCM4P33991 863 aa20.78■□□□□ 0.92
SYNM-204ENST00000594047 FAM47CQ5HY64 1035 aa20.78■□□□□ 0.92
SYNM-204ENST00000594047 C16orf45Q96MC5 204 aaPredicted RBP20.78■□□□□ 0.92
SYNM-204ENST00000594047 ATP2C2O75185 946 aa20.78■□□□□ 0.92
SYNM-204ENST00000594047 DPP8Q6V1X1 898 aaPredicted RBP20.78■□□□□ 0.92
SYNM-204ENST00000594047 FERMT1Q9BQL6 677 aa20.78■□□□□ 0.92
SYNM-204ENST00000594047 IMPG2Q9BZV3 1241 aa20.78■□□□□ 0.92
SYNM-204ENST00000594047 N4BP3O15049 544 aa20.78■□□□□ 0.92
SYNM-204ENST00000594047 RNF187Q5TA31 235 aaPredicted RBP20.78■□□□□ 0.92
SYNM-204ENST00000594047 RNF34Q969K3 372 aa20.78■□□□□ 0.92
SYNM-204ENST00000594047 ORAI2Q96SN7 254 aa20.78■□□□□ 0.92
SYNM-204ENST00000594047 DTNBO60941 627 aa20.78■□□□□ 0.92
SYNM-204ENST00000594047 KCNA6P17658 529 aa20.77■□□□□ 0.92
SYNM-204ENST00000594047 BICC1Q9H694 974 aaKnown RBP20.77■□□□□ 0.92
SYNM-204ENST00000594047 ERCC3P19447 782 aa20.77■□□□□ 0.92
SYNM-204ENST00000594047 APOBRQ0VD83 1088 aa20.77■□□□□ 0.92
SYNM-204ENST00000594047 SPAG5Q96R06 1193 aa20.77■□□□□ 0.92
SYNM-204ENST00000594047 NKTRP30414 1462 aaKnown RBP20.77■□□□□ 0.92
SYNM-204ENST00000594047 KRT9P35527 623 aa20.77■□□□□ 0.92
SYNM-204ENST00000594047 PTPN23Q9H3S7 1636 aa20.77■□□□□ 0.92
SYNM-204ENST00000594047 MKRN3Q13064 507 aaKnown RBP20.77■□□□□ 0.92
SYNM-204ENST00000594047 DCAF17Q5H9S7 520 aaPredicted RBP20.77■□□□□ 0.92
SYNM-204ENST00000594047 RNF169Q8NCN4 708 aa20.77■□□□□ 0.92
SYNM-204ENST00000594047 ALS2CR12Q96Q35 445 aa20.77■□□□□ 0.92
SYNM-204ENST00000594047 RBM8AQ9Y5S9 174 aaKnown RBP20.77■□□□□ 0.92
SYNM-204ENST00000594047 CCDC169A6NNP5 214 aa20.77■□□□□ 0.91
SYNM-204ENST00000594047 GCP02774 474 aa20.77■□□□□ 0.91
SYNM-204ENST00000594047 STX17P56962 302 aa20.77■□□□□ 0.91
SYNM-204ENST00000594047 CCDC63Q8NA47 563 aa20.77■□□□□ 0.91
SYNM-204ENST00000594047 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
SYNM-204ENST00000594047 KRT5P13647 590 aa20.76■□□□□ 0.91
SYNM-204ENST00000594047 PLCB3Q01970 1234 aa20.76■□□□□ 0.91
SYNM-204ENST00000594047 AATFQ9NY61 560 aaKnown RBP eCLIP20.76■□□□□ 0.91
SYNM-204ENST00000594047 IKBKGQ9Y6K9 419 aa20.76■□□□□ 0.91
SYNM-204ENST00000594047 NBPF7P0C2Y1 421 aaPredicted RBP20.76■□□□□ 0.91
SYNM-204ENST00000594047 KIAA0586Q9BVV6 1533 aa20.76■□□□□ 0.91
SYNM-204ENST00000594047 NOP56O00567 594 aaKnown RBP20.76■□□□□ 0.91
SYNM-204ENST00000594047 KLHDC4Q8TBB5 520 aa20.76■□□□□ 0.91
SYNM-204ENST00000594047 SH3BP5O60239 455 aa20.76■□□□□ 0.91
SYNM-204ENST00000594047 FERP16591 822 aa20.76■□□□□ 0.91
SYNM-204ENST00000594047 SYKP43405 635 aa20.76■□□□□ 0.91
SYNM-204ENST00000594047 MCMDC2Q4G0Z9 681 aa20.76■□□□□ 0.91
SYNM-204ENST00000594047 RASA3Q14644 834 aa20.75■□□□□ 0.91
SYNM-204ENST00000594047 GIMAP6Q6P9H5 292 aa20.75■□□□□ 0.91
SYNM-204ENST00000594047 GCOM1H8Y6P7 765 aaPredicted RBP20.75■□□□□ 0.91
SYNM-204ENST00000594047 MYZAPP0CAP1 466 aa20.75■□□□□ 0.91
SYNM-204ENST00000594047 CCDC129Q6ZRS4 1044 aa20.75■□□□□ 0.91
SYNM-204ENST00000594047 ZSCAN12O43309 604 aa20.75■□□□□ 0.91
SYNM-204ENST00000594047 C19orf44Q9H6X5 657 aa20.75■□□□□ 0.91
SYNM-204ENST00000594047 C14orf93Q9H972 538 aaKnown RBP20.75■□□□□ 0.91
SYNM-204ENST00000594047 ARMT1Q9H993 441 aa20.75■□□□□ 0.91
SYNM-204ENST00000594047 SMCR8Q8TEV9 937 aaPredicted RBP20.75■□□□□ 0.91
SYNM-204ENST00000594047 FSD2A1L4K1 749 aa20.74■□□□□ 0.91
SYNM-204ENST00000594047 SMIM23A6NLE4 172 aa20.74■□□□□ 0.91
SYNM-204ENST00000594047 RIMS2Q9UQ26 1411 aa20.74■□□□□ 0.91
SYNM-204ENST00000594047 CCDC102BQ68D86 513 aa20.74■□□□□ 0.91
SYNM-204ENST00000594047 MBD4O95243 580 aa20.74■□□□□ 0.91
SYNM-204ENST00000594047 FAM114A1Q8IWE2 563 aa20.74■□□□□ 0.91
SYNM-204ENST00000594047 TRIM6Q9C030 488 aaPredicted RBP20.74■□□□□ 0.91
SYNM-204ENST00000594047 NDUFB9Q9Y6M9 179 aa20.74■□□□□ 0.91
SYNM-204ENST00000594047 GGA1Q9UJY5 639 aa20.74■□□□□ 0.91
SYNM-204ENST00000594047 KSR2Q6VAB6 950 aa20.73■□□□□ 0.91
SYNM-204ENST00000594047 NDC80O14777 642 aa20.73■□□□□ 0.91
SYNM-204ENST00000594047 PRDM1O75626 825 aa20.73■□□□□ 0.91
SYNM-204ENST00000594047 BIRC2Q13490 618 aa20.73■□□□□ 0.91
SYNM-204ENST00000594047 A0A1W2PRG0 241 aa20.73■□□□□ 0.91
SYNM-204ENST00000594047 ITGA6P23229 1130 aa20.73■□□□□ 0.91
SYNM-204ENST00000594047 TCIRG1Q13488 830 aa20.73■□□□□ 0.91
SYNM-204ENST00000594047 CNPY2Q9Y2B0 182 aa20.73■□□□□ 0.91
SYNM-204ENST00000594047 IGHDP01880 384 aa20.73■□□□□ 0.91
SYNM-204ENST00000594047 LETM2Q2VYF4 491 aa20.73■□□□□ 0.91
SYNM-204ENST00000594047 AKR1B10O60218 316 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 ZNF608Q9ULD9 1512 aaPredicted RBP20.72■□□□□ 0.91
SYNM-204ENST00000594047 PARP1P09874 1014 aaKnown RBP20.72■□□□□ 0.91
SYNM-204ENST00000594047 TTC22Q5TAA0 569 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 TICAM2Q86XR7 235 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 CCDC117Q8IWD4 279 aaPredicted RBP20.72■□□□□ 0.91
SYNM-204ENST00000594047 B4DLN1 442 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 MRPL12P52815 198 aaKnown RBP20.72■□□□□ 0.91
SYNM-204ENST00000594047 CEP135Q66GS9 1140 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 NACA2Q9H009 215 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 PCDH11XQ9BZA7 1347 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 PCDH11YQ9BZA8 1340 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 A1BGP04217 495 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 BIRC3Q13489 604 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 PPP2R5DQ14738 602 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 TRERF1Q96PN7 1200 aa20.72■□□□□ 0.91
SYNM-204ENST00000594047 PPIP5K2O43314 1243 aa20.71■□□□□ 0.91
SYNM-204ENST00000594047 TNNQ9UQP3 1299 aa20.71■□□□□ 0.91
SYNM-204ENST00000594047 IL15P40933 162 aaPredicted RBP20.71■□□□□ 0.91
SYNM-204ENST00000594047 DOK7Q18PE1 504 aa20.71■□□□□ 0.91
SYNM-204ENST00000594047 PRDM10Q9NQV6 1147 aa20.71■□□□□ 0.91
SYNM-204ENST00000594047 PLCH2O75038 1416 aa20.71■□□□□ 0.91
SYNM-204ENST00000594047 TAOK3Q9H2K8 898 aa20.71■□□□□ 0.91
SYNM-204ENST00000594047 SDSP20132 328 aa20.71■□□□□ 0.91
SYNM-204ENST00000594047 RAPGEF1Q13905 1077 aa20.71■□□□□ 0.91
SYNM-204ENST00000594047 STX1AQ16623 288 aa20.71■□□□□ 0.91
SYNM-204ENST00000594047 TIMM10P62072 90 aa20.71■□□□□ 0.91
SYNM-204ENST00000594047 IRX5P78411 483 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms