RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CACNA1SQ13698 1873 aa25.19■■□□□ 1.62
PNKP-203ENST00000593946 MYH13Q9UKX3 1938 aa25.18■■□□□ 1.62
PNKP-203ENST00000593946 CWC27Q6UX04 472 aaKnown RBP25.18■■□□□ 1.62
PNKP-203ENST00000593946 RUFY2Q8WXA3 655 aa25.18■■□□□ 1.62
PNKP-203ENST00000593946 WTIPA6NIX2 430 aaPredicted RBP25.17■■□□□ 1.62
PNKP-203ENST00000593946 BBOX1O75936 387 aa25.17■■□□□ 1.62
PNKP-203ENST00000593946 DOCK2Q92608 1830 aa25.17■■□□□ 1.62
PNKP-203ENST00000593946 LTBP1Q14766 1721 aa25.17■■□□□ 1.62
PNKP-203ENST00000593946 NPR1P16066 1061 aa25.17■■□□□ 1.62
PNKP-203ENST00000593946 FKBP4Q02790 459 aaKnown RBP eCLIP25.17■■□□□ 1.62
PNKP-203ENST00000593946 UPF1Q92900 1129 aaKnown RBP eCLIP25.17■■□□□ 1.62
PNKP-203ENST00000593946 SNRKQ9NRH2 765 aa25.17■■□□□ 1.62
PNKP-203ENST00000593946 ZNF804BA4D1E1 1349 aa25.16■■□□□ 1.62
PNKP-203ENST00000593946 ZAP70P43403 619 aa25.16■■□□□ 1.62
PNKP-203ENST00000593946 PI16Q6UXB8 463 aa25.16■■□□□ 1.62
PNKP-203ENST00000593946 ANTXR1Q9H6X2 564 aa25.16■■□□□ 1.62
PNKP-203ENST00000593946 BCAMP50895 628 aa25.15■■□□□ 1.62
PNKP-203ENST00000593946 NMIQ13287 307 aaPredicted RBP25.15■■□□□ 1.62
PNKP-203ENST00000593946 RAD50Q92878 1312 aa25.15■■□□□ 1.62
PNKP-203ENST00000593946 EPB41L2O43491 1005 aaKnown RBP25.15■■□□□ 1.62
PNKP-203ENST00000593946 KCNJ4P48050 445 aa25.15■■□□□ 1.62
PNKP-203ENST00000593946 TMC4Q7Z404 712 aa25.15■■□□□ 1.62
PNKP-203ENST00000593946 SLC51AQ86UW1 340 aa25.15■■□□□ 1.62
PNKP-203ENST00000593946 FAM227BQ96M60 508 aa25.15■■□□□ 1.62
PNKP-203ENST00000593946 XDHP47989 1333 aa25.14■■□□□ 1.62
PNKP-203ENST00000593946 RASGRF1Q13972 1273 aa25.14■■□□□ 1.61
PNKP-203ENST00000593946 ANO2Q9NQ90 1003 aa25.14■■□□□ 1.61
PNKP-203ENST00000593946 A0A0D9SFI3 127 aa25.13■■□□□ 1.61
PNKP-203ENST00000593946 MASTLQ96GX5 879 aa25.13■■□□□ 1.61
PNKP-203ENST00000593946 HMG20BQ9P0W2 317 aa25.13■■□□□ 1.61
PNKP-203ENST00000593946 DLEC1Q9Y238 1755 aa25.12■■□□□ 1.61
PNKP-203ENST00000593946 ANKIB1Q9P2G1 1089 aa25.12■■□□□ 1.61
PNKP-203ENST00000593946 LEMD3Q9Y2U8 911 aa25.12■■□□□ 1.61
PNKP-203ENST00000593946 IRS2Q9Y4H2 1338 aa25.12■■□□□ 1.61
PNKP-203ENST00000593946 MED23Q9ULK4 1368 aa25.12■■□□□ 1.61
PNKP-203ENST00000593946 KIF13BQ9NQT8 1826 aa25.12■■□□□ 1.61
PNKP-203ENST00000593946 CYP2E1P05181 493 aaPredicted RBP25.12■■□□□ 1.61
PNKP-203ENST00000593946 GYG1P46976 350 aa25.12■■□□□ 1.61
PNKP-203ENST00000593946 CAVIN4Q5BKX8 364 aa25.12■■□□□ 1.61
PNKP-203ENST00000593946 SPATA5Q8NB90 893 aa25.12■■□□□ 1.61
PNKP-203ENST00000593946 FAM84BQ96KN1 310 aaPredicted RBP25.12■■□□□ 1.61
PNKP-203ENST00000593946 C10orf71Q711Q0 1435 aa25.11■■□□□ 1.61
PNKP-203ENST00000593946 PPEF1O14829 653 aaPredicted RBP25.11■■□□□ 1.61
PNKP-203ENST00000593946 KLRK1P26718 216 aa25.11■■□□□ 1.61
PNKP-203ENST00000593946 ALDH1B1P30837 517 aa25.11■■□□□ 1.61
PNKP-203ENST00000593946 TTF1Q15361 905 aaPredicted RBP25.11■■□□□ 1.61
PNKP-203ENST00000593946 FBXO33Q7Z6M2 555 aa25.11■■□□□ 1.61
PNKP-203ENST00000593946 KIF2CQ99661 725 aa25.1■■□□□ 1.61
PNKP-203ENST00000593946 LSG1Q9H089 658 aaKnown RBP25.1■■□□□ 1.61
PNKP-203ENST00000593946 CHGBP05060 677 aa25.09■■□□□ 1.61
PNKP-203ENST00000593946 GPSM2P81274 684 aa25.09■■□□□ 1.61
PNKP-203ENST00000593946 C2CD5Q86YS7 1000 aa25.09■■□□□ 1.61
PNKP-203ENST00000593946 SP8Q8IXZ3 490 aa25.09■■□□□ 1.61
PNKP-203ENST00000593946 IPO9Q96P70 1041 aaKnown RBP25.09■■□□□ 1.61
PNKP-203ENST00000593946 GNL3LQ9NVN8 582 aaKnown RBP25.09■■□□□ 1.61
PNKP-203ENST00000593946 PODXL2Q9NZ53 605 aa25.09■■□□□ 1.61
PNKP-203ENST00000593946 LRRFIP1Q32MZ4 808 aaKnown RBP25.09■■□□□ 1.61
PNKP-203ENST00000593946 DDRGK1Q96HY6 314 aa25.09■■□□□ 1.61
PNKP-203ENST00000593946 ATP6V0A2Q9Y487 856 aa25.09■■□□□ 1.61
PNKP-203ENST00000593946 SLX4Q8IY92 1834 aa25.08■■□□□ 1.61
PNKP-203ENST00000593946 H0YIN7 160 aa25.08■■□□□ 1.61
PNKP-203ENST00000593946 RNF113AO15541 343 aaKnown RBP25.08■■□□□ 1.61
PNKP-203ENST00000593946 STYK1Q6J9G0 422 aa25.08■■□□□ 1.61
PNKP-203ENST00000593946 KIAA1211Q6ZU35 1233 aa25.08■■□□□ 1.61
PNKP-203ENST00000593946 COL1A1P02452 1464 aaPredicted RBP25.08■■□□□ 1.6
PNKP-203ENST00000593946 ZBTB22O15209 634 aa25.07■■□□□ 1.6
PNKP-203ENST00000593946 ZFYP08048 801 aaPredicted RBP25.07■■□□□ 1.6
PNKP-203ENST00000593946 ZMYM1Q5SVZ6 1142 aa25.07■■□□□ 1.6
PNKP-203ENST00000593946 C15orf52Q6ZUT6 534 aaKnown RBP25.07■■□□□ 1.6
PNKP-203ENST00000593946 VPS37DQ86XT2 251 aa25.07■■□□□ 1.6
PNKP-203ENST00000593946 PIH1D3Q9NQM4 214 aaKnown RBP25.07■■□□□ 1.6
PNKP-203ENST00000593946 ATP2B4P23634 1241 aa25.06■■□□□ 1.6
PNKP-203ENST00000593946 ZNF589Q86UQ0 364 aaPredicted RBP25.06■■□□□ 1.6
PNKP-203ENST00000593946 TXNRD3Q86VQ6 643 aa25.06■■□□□ 1.6
PNKP-203ENST00000593946 NSFL1CQ9UNZ2 370 aaKnown RBP25.06■■□□□ 1.6
PNKP-203ENST00000593946 CCDC171Q6TFL3 1326 aa25.06■■□□□ 1.6
PNKP-203ENST00000593946 HIBADHP31937 336 aaKnown RBP25.06■■□□□ 1.6
PNKP-203ENST00000593946 MCMDC2Q4G0Z9 681 aa25.06■■□□□ 1.6
PNKP-203ENST00000593946 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.06■■□□□ 1.62e-7■■■■■ 30.6
PNKP-203ENST00000593946 HELLSQ9NRZ9 838 aa25.06■■□□□ 1.6
PNKP-203ENST00000593946 SEMA3EO15041 775 aa25.05■■□□□ 1.6
PNKP-203ENST00000593946 SEC62Q99442 399 aaKnown RBP25.05■■□□□ 1.6
PNKP-203ENST00000593946 GGA1Q9UJY5 639 aa25.05■■□□□ 1.6
PNKP-203ENST00000593946 DUOX1Q9NRD9 1551 aa25.05■■□□□ 1.6
PNKP-203ENST00000593946 PDS5AQ29RF7 1337 aaKnown RBP25.04■■□□□ 1.6
PNKP-203ENST00000593946 UFL1O94874 794 aa25.04■■□□□ 1.6
PNKP-203ENST00000593946 PTH1RQ03431 593 aa25.04■■□□□ 1.6
PNKP-203ENST00000593946 SLFNL1Q499Z3 407 aa25.04■■□□□ 1.6
PNKP-203ENST00000593946 ZNF622Q969S3 477 aaKnown RBP eCLIP25.04■■□□□ 1.6
PNKP-203ENST00000593946 DENND2AQ9ULE3 1009 aa25.04■■□□□ 1.6
PNKP-203ENST00000593946 IQSEC3Q9UPP2 1182 aaPredicted RBP25.04■■□□□ 1.6
PNKP-203ENST00000593946 MCCP23508 829 aa25.03■■□□□ 1.6
PNKP-203ENST00000593946 CHRNA5P30532 468 aa25.03■■□□□ 1.6
PNKP-203ENST00000593946 ZBTB7AO95365 584 aa25.03■■□□□ 1.6
PNKP-203ENST00000593946 HSPA4P34932 840 aa25.03■■□□□ 1.6
PNKP-203ENST00000593946 ZSCAN25Q6NSZ9 544 aa25.03■■□□□ 1.6
PNKP-203ENST00000593946 MTFR1LQ9H019 292 aa25.03■■□□□ 1.6
PNKP-203ENST00000593946 IDH1O75874 414 aaKnown RBP25.02■■□□□ 1.6
PNKP-203ENST00000593946 ADD2P35612 726 aa25.02■■□□□ 1.6
PNKP-203ENST00000593946 R3HDM1Q15032 1099 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms