RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 UBXN2AP68543 259 aa15.89■□□□□ 0.13
ZNF558-202ENST00000593891 MAP3K11Q16584 847 aa15.89■□□□□ 0.13
ZNF558-202ENST00000593891 TJAP1Q5JTD0 557 aa15.89■□□□□ 0.13
ZNF558-202ENST00000593891 MORC1Q86VD1 984 aa15.89■□□□□ 0.13
ZNF558-202ENST00000593891 GAS2L2Q8NHY3 880 aa15.89■□□□□ 0.13
ZNF558-202ENST00000593891 GMLQ99445 158 aa15.89■□□□□ 0.13
ZNF558-202ENST00000593891 ZBTB3Q9H5J0 574 aa15.89■□□□□ 0.13
ZNF558-202ENST00000593891 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
ZNF558-202ENST00000593891 LAMB4A4D0S4 1761 aa15.89■□□□□ 0.13
ZNF558-202ENST00000593891 DUOX1Q9NRD9 1551 aa15.88■□□□□ 0.13
ZNF558-202ENST00000593891 SGPL1O95470 568 aa15.88■□□□□ 0.13
ZNF558-202ENST00000593891 LACTBP83111 547 aaPredicted RBP15.88■□□□□ 0.13
ZNF558-202ENST00000593891 TRIM47Q96LD4 638 aa15.88■□□□□ 0.13
ZNF558-202ENST00000593891 ARHGAP39Q9C0H5 1083 aa15.88■□□□□ 0.13
ZNF558-202ENST00000593891 ARIH1Q9Y4X5 557 aaPredicted RBP15.88■□□□□ 0.13
ZNF558-202ENST00000593891 HOXD10P28358 340 aa15.87■□□□□ 0.13
ZNF558-202ENST00000593891 GPSM2P81274 684 aa15.87■□□□□ 0.13
ZNF558-202ENST00000593891 TTLL7Q6ZT98 887 aa15.87■□□□□ 0.13
ZNF558-202ENST00000593891 APOBEC3FQ8IUX4 373 aaKnown RBP15.87■□□□□ 0.13
ZNF558-202ENST00000593891 C7orf61Q8IZ16 206 aa15.87■□□□□ 0.13
ZNF558-202ENST00000593891 OGFOD1Q8N543 542 aa15.87■□□□□ 0.13
ZNF558-202ENST00000593891 RAET1EQ8TD07 263 aa15.87■□□□□ 0.13
ZNF558-202ENST00000593891 FZD1Q9UP38 647 aa15.87■□□□□ 0.13
ZNF558-202ENST00000593891 WNT10BO00744 389 aa15.86■□□□□ 0.13
ZNF558-202ENST00000593891 TFRCP02786 760 aaKnown RBP15.86■□□□□ 0.13
ZNF558-202ENST00000593891 HCLS1P14317 486 aaPredicted RBP15.86■□□□□ 0.13
ZNF558-202ENST00000593891 MAGEA10P43363 369 aaPredicted RBP15.86■□□□□ 0.13
ZNF558-202ENST00000593891 ZNF697Q5TEC3 545 aa15.86■□□□□ 0.13
ZNF558-202ENST00000593891 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
ZNF558-202ENST00000593891 RIPOR2Q9Y4F9 1068 aa15.86■□□□□ 0.13
ZNF558-202ENST00000593891 TBC1D16Q8TBP0 767 aa15.85■□□□□ 0.13
ZNF558-202ENST00000593891 CDX2Q99626 313 aaPredicted RBP15.85■□□□□ 0.13
ZNF558-202ENST00000593891 GJA5P36382 358 aa15.84■□□□□ 0.13
ZNF558-202ENST00000593891 SRRDQ9UH36 339 aa15.84■□□□□ 0.13
ZNF558-202ENST00000593891 RRP7AQ9Y3A4 280 aaKnown RBP15.84■□□□□ 0.13
ZNF558-202ENST00000593891 ZNF646O15015 1829 aaPredicted RBP15.84■□□□□ 0.13
ZNF558-202ENST00000593891 USP17L3A6NCW0 530 aa15.83■□□□□ 0.12
ZNF558-202ENST00000593891 USP17L4A6NCW7 530 aa15.83■□□□□ 0.12
ZNF558-202ENST00000593891 SYN1P17600 705 aa15.83■□□□□ 0.12
ZNF558-202ENST00000593891 USP17L1Q7RTZ2 530 aa15.83■□□□□ 0.12
ZNF558-202ENST00000593891 NECAB2Q7Z6G3 386 aa15.83■□□□□ 0.12
ZNF558-202ENST00000593891 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
ZNF558-202ENST00000593891 CEMIPQ8WUJ3 1361 aa15.83■□□□□ 0.12
ZNF558-202ENST00000593891 CACNA1AO00555 2505 aa15.82■□□□□ 0.12
ZNF558-202ENST00000593891 PIEZO1Q92508 2521 aa15.82■□□□□ 0.12
ZNF558-202ENST00000593891 TLR2O60603 784 aa15.82■□□□□ 0.12
ZNF558-202ENST00000593891 IREB2P48200 963 aaKnown RBP15.82■□□□□ 0.12
ZNF558-202ENST00000593891 PAWRQ96IZ0 340 aaKnown RBP15.82■□□□□ 0.12
ZNF558-202ENST00000593891 HCN4Q9Y3Q4 1203 aa15.82■□□□□ 0.12
ZNF558-202ENST00000593891 CCL15-CCL14A0A0B4J2E2 113 aa15.81■□□□□ 0.12
ZNF558-202ENST00000593891 CCL15Q16663 113 aa15.81■□□□□ 0.12
ZNF558-202ENST00000593891 ANKRD13AQ8IZ07 590 aa15.81■□□□□ 0.12
ZNF558-202ENST00000593891 HELBQ8NG08 1087 aaPredicted RBP15.81■□□□□ 0.12
ZNF558-202ENST00000593891 MS4A4AQ96JQ5 239 aa15.81■□□□□ 0.12
ZNF558-202ENST00000593891 UNC93B1Q9H1C4 597 aa15.81■□□□□ 0.12
ZNF558-202ENST00000593891 DEFB129Q9H1M3 183 aa15.81■□□□□ 0.12
ZNF558-202ENST00000593891 FAM205AQ6ZU69 1335 aa15.8■□□□□ 0.12
ZNF558-202ENST00000593891 SASH1O94885 1247 aa15.8■□□□□ 0.12
ZNF558-202ENST00000593891 MYL6BP14649 208 aa15.8■□□□□ 0.12
ZNF558-202ENST00000593891 MMP14P50281 582 aa15.8■□□□□ 0.12
ZNF558-202ENST00000593891 SUPT20HL1Q3ZLR7 823 aa15.8■□□□□ 0.12
ZNF558-202ENST00000593891 BRI3BPQ8WY22 251 aa15.8■□□□□ 0.12
ZNF558-202ENST00000593891 MUC3AQ02505 3323 aa15.8■□□□□ 0.12
ZNF558-202ENST00000593891 PSMC4P43686 418 aa15.79■□□□□ 0.12
ZNF558-202ENST00000593891 GTF2A2P52657 109 aa15.79■□□□□ 0.12
ZNF558-202ENST00000593891 OPTNQ96CV9 577 aa15.79■□□□□ 0.12
ZNF558-202ENST00000593891 C1QTNF1Q9BXJ1 281 aa15.79■□□□□ 0.12
ZNF558-202ENST00000593891 DDX60Q8IY21 1712 aaKnown RBP15.79■□□□□ 0.12
ZNF558-202ENST00000593891 UFL1O94874 794 aa15.78■□□□□ 0.12
ZNF558-202ENST00000593891 FMNL1O95466 1100 aaPredicted RBP15.78■□□□□ 0.12
ZNF558-202ENST00000593891 OSBPP22059 807 aa15.78■□□□□ 0.12
ZNF558-202ENST00000593891 PODNQ7Z5L7 613 aa15.78■□□□□ 0.12
ZNF558-202ENST00000593891 FAM43AQ8N2R8 423 aa15.78■□□□□ 0.12
ZNF558-202ENST00000593891 CELF1Q92879 486 aaKnown RBP15.78■□□□□ 0.12
ZNF558-202ENST00000593891 MYPNQ86TC9 1320 aa15.77■□□□□ 0.12
ZNF558-202ENST00000593891 DIAPH1O60610 1272 aaKnown RBP15.77■□□□□ 0.12
ZNF558-202ENST00000593891 SLAIN1Q8ND83 568 aa15.77■□□□□ 0.12
ZNF558-202ENST00000593891 DEFB118Q96PH6 123 aa15.77■□□□□ 0.12
ZNF558-202ENST00000593891 PODXL2Q9NZ53 605 aa15.77■□□□□ 0.12
ZNF558-202ENST00000593891 ANKIB1Q9P2G1 1089 aa15.77■□□□□ 0.12
ZNF558-202ENST00000593891 TRMT112Q9UI30 125 aaKnown RBP15.77■□□□□ 0.12
ZNF558-202ENST00000593891 GGA1Q9UJY5 639 aa15.77■□□□□ 0.12
ZNF558-202ENST00000593891 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.12
ZNF558-202ENST00000593891 TAF1P21675 1872 aa15.77■□□□□ 0.11
ZNF558-202ENST00000593891 SIPA1L3O60292 1781 aaPredicted RBP15.77■□□□□ 0.11
ZNF558-202ENST00000593891 COL1A1P02452 1464 aaPredicted RBP15.77■□□□□ 0.11
ZNF558-202ENST00000593891 SH3TC1Q8TE82 1336 aa15.76■□□□□ 0.11
ZNF558-202ENST00000593891 NUP98P52948 1817 aa15.76■□□□□ 0.11
ZNF558-202ENST00000593891 FOSL2P15408 326 aa15.76■□□□□ 0.11
ZNF558-202ENST00000593891 ALYREFQ86V81 257 aaKnown RBP15.76■□□□□ 0.11
ZNF558-202ENST00000593891 MYLIPQ8WY64 445 aa15.76■□□□□ 0.11
ZNF558-202ENST00000593891 POLR3GLQ9BT43 218 aa15.76■□□□□ 0.11
ZNF558-202ENST00000593891 SEMA6BQ9H3T3 888 aa15.76■□□□□ 0.11
ZNF558-202ENST00000593891 ELP3Q9H9T3 547 aa15.76■□□□□ 0.11
ZNF558-202ENST00000593891 MYO3BQ8WXR4 1341 aa15.75■□□□□ 0.11
ZNF558-202ENST00000593891 USP2O75604 605 aaPredicted RBP15.75■□□□□ 0.11
ZNF558-202ENST00000593891 ZCCHC17Q9NP64 241 aaKnown RBP15.75■□□□□ 0.11
ZNF558-202ENST00000593891 LRRC37AA6NMS7 1700 aa15.74■□□□□ 0.11
ZNF558-202ENST00000593891 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
ZNF558-202ENST00000593891 SCN9AQ15858 1988 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms