RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 CHRNDQ07001 517 aa15.16■□□□□ 0.02
SOD3-202ENST00000593742 HELBQ8NG08 1087 aaPredicted RBP15.16■□□□□ 0.02
SOD3-202ENST00000593742 ZNF594Q96JF6 807 aaPredicted RBP15.16■□□□□ 0.02
SOD3-202ENST00000593742 ANKRD2Q9GZV1 360 aa15.16■□□□□ 0.02
SOD3-202ENST00000593742 SMC4Q9NTJ3 1288 aa15.16■□□□□ 0.02
SOD3-202ENST00000593742 ZNF804BA4D1E1 1349 aa15.16■□□□□ 0.02
SOD3-202ENST00000593742 PLIN1O60240 522 aa15.15■□□□□ 0.02
SOD3-202ENST00000593742 TAF5LO75529 589 aa15.15■□□□□ 0.02
SOD3-202ENST00000593742 VIL1P09327 827 aaKnown RBP15.15■□□□□ 0.02
SOD3-202ENST00000593742 VEGFBP49765 207 aa15.15■□□□□ 0.02
SOD3-202ENST00000593742 CCDC57Q2TAC2 916 aa15.15■□□□□ 0.02
SOD3-202ENST00000593742 KIF4BQ2VIQ3 1234 aa15.15■□□□□ 0.02
SOD3-202ENST00000593742 RSBN1LQ6PCB5 846 aaPredicted RBP15.15■□□□□ 0.02
SOD3-202ENST00000593742 TXNRD3Q86VQ6 643 aa15.15■□□□□ 0.02
SOD3-202ENST00000593742 SUCLG2Q96I99 432 aa15.15■□□□□ 0.02
SOD3-202ENST00000593742 MXD3Q9BW11 206 aa15.15■□□□□ 0.02
SOD3-202ENST00000593742 TRPM7Q96QT4 1865 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 USP17L3A6NCW0 530 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 USP17L4A6NCW7 530 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 SNAP23O00161 211 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 NBPF7P0C2Y1 421 aaPredicted RBP15.14■□□□□ 0.01
SOD3-202ENST00000593742 DEFB115Q30KQ5 88 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 DLK2Q6UY11 383 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 USP17L1Q7RTZ2 530 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 PODNQ7Z5L7 613 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 USP48Q86UV5 1035 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 ZC3H15Q8WU90 426 aaKnown RBP15.14■□□□□ 0.01
SOD3-202ENST00000593742 LEMD3Q9Y2U8 911 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 PTPRCP08575 1304 aa15.14■□□□□ 0.01
SOD3-202ENST00000593742 CST9Q5W186 159 aa15.13■□□□□ 0.01
SOD3-202ENST00000593742 CDC37L1Q7L3B6 337 aa15.13■□□□□ 0.01
SOD3-202ENST00000593742 CNNM1Q9NRU3 951 aa15.13■□□□□ 0.01
SOD3-202ENST00000593742 ASTN2O75129 1339 aaPredicted RBP15.13■□□□□ 0.01
SOD3-202ENST00000593742 RASSF10A6NK89 507 aa15.12■□□□□ 0.01
SOD3-202ENST00000593742 ADM5C9JUS6 153 aa15.12■□□□□ 0.01
SOD3-202ENST00000593742 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
SOD3-202ENST00000593742 LDHAL6AQ6ZMR3 332 aa15.12■□□□□ 0.01
SOD3-202ENST00000593742 KRT26Q7Z3Y9 468 aa15.12■□□□□ 0.01
SOD3-202ENST00000593742 AGBL3Q8NEM8 1001 aa15.12■□□□□ 0.01
SOD3-202ENST00000593742 DCPSQ96C86 337 aaKnown RBP15.12■□□□□ 0.01
SOD3-202ENST00000593742 COA1Q9GZY4 146 aa15.12■□□□□ 0.01
SOD3-202ENST00000593742 GGA3Q9NZ52 723 aa15.12■□□□□ 0.01
SOD3-202ENST00000593742 POLR2AP24928 1970 aaKnown RBP15.12■□□□□ 0.01
SOD3-202ENST00000593742 PSME4Q14997 1843 aa15.12■□□□□ 0.01
SOD3-202ENST00000593742 USP17L8P0C7I0 530 aa15.11■□□□□ 0.01
SOD3-202ENST00000593742 CYP4F22Q6NT55 531 aa15.11■□□□□ 0.01
SOD3-202ENST00000593742 BICC1Q9H694 974 aaKnown RBP15.11■□□□□ 0.01
SOD3-202ENST00000593742 PGAP2Q9UHJ9 254 aa15.11■□□□□ 0.01
SOD3-202ENST00000593742 WDR33Q9C0J8 1336 aaKnown RBP15.11■□□□□ 0.01
SOD3-202ENST00000593742 SCARF1Q14162 830 aa15.1■□□□□ 0.01
SOD3-202ENST00000593742 ALDH1L2Q3SY69 923 aa15.1■□□□□ 0.01
SOD3-202ENST00000593742 MIER1Q8N108 512 aa15.1■□□□□ 0.01
SOD3-202ENST00000593742 AIDAQ96BJ3 306 aa15.1■□□□□ 0.01
SOD3-202ENST00000593742 KAZALD1Q96I82 304 aa15.1■□□□□ 0.01
SOD3-202ENST00000593742 MYOZ2Q9NPC6 264 aa15.1■□□□□ 0.01
SOD3-202ENST00000593742 TLL2Q9Y6L7 1015 aa15.1■□□□□ 0.01
SOD3-202ENST00000593742 A0A1B0GUL6 1792 aa15.09■□□□□ 0.01
SOD3-202ENST00000593742 GTF2IP78347 998 aa15.09■□□□□ 0.01
SOD3-202ENST00000593742 DACT2Q5SW24 774 aa15.09■□□□□ 0.01
SOD3-202ENST00000593742 COL13A1Q5TAT6 717 aaPredicted RBP15.09■□□□□ 0.01
SOD3-202ENST00000593742 ANGEL2Q5VTE6 544 aaKnown RBP15.09■□□□□ 0.01
SOD3-202ENST00000593742 TTLL5Q6EMB2 1281 aa15.09■□□□□ 0.01
SOD3-202ENST00000593742 SULF1Q8IWU6 871 aa15.09■□□□□ 0.01
SOD3-202ENST00000593742 CAPNS2Q96L46 248 aa15.09■□□□□ 0.01
SOD3-202ENST00000593742 PUS3Q9BZE2 481 aaKnown RBP15.09■□□□□ 0.01
SOD3-202ENST00000593742 NOB1Q9ULX3 412 aaKnown RBP15.09■□□□□ 0.01
SOD3-202ENST00000593742 SCAF8Q9UPN6 1271 aaKnown RBP15.09■□□□□ 0.01
SOD3-202ENST00000593742 JAG2Q9Y219 1238 aa15.09■□□□□ 0.01
SOD3-202ENST00000593742 ZNF280AP59817 542 aaPredicted RBP15.08■□□□□ 0
SOD3-202ENST00000593742 STRIP1Q5VSL9 837 aa15.08■□□□□ 0
SOD3-202ENST00000593742 KIAA0825Q8IV33 1275 aa15.08■□□□□ 0
SOD3-202ENST00000593742 TRMT2AQ8IZ69 625 aaKnown RBP15.08■□□□□ 0
SOD3-202ENST00000593742 OGFOD1Q8N543 542 aa15.08■□□□□ 0
SOD3-202ENST00000593742 GMLQ99445 158 aa15.08■□□□□ 0
SOD3-202ENST00000593742 CD209Q9NNX6 404 aa15.08■□□□□ 0
SOD3-202ENST00000593742 FOXN1O15353 648 aa15.07■□□□□ 0
SOD3-202ENST00000593742 SASH1O94885 1247 aa15.07■□□□□ 0
SOD3-202ENST00000593742 ECE1P42892 770 aa15.07■□□□□ 0
SOD3-202ENST00000593742 ZNF804AQ7Z570 1209 aa15.07■□□□□ 0
SOD3-202ENST00000593742 SAPCD2Q86UD0 394 aa15.07■□□□□ 0
SOD3-202ENST00000593742 ANKRD44Q8N8A2 993 aa15.07■□□□□ 0
SOD3-202ENST00000593742 UTYO14607 1347 aa15.07■□□□□ 0
SOD3-202ENST00000593742 ZNF609O15014 1411 aa15.07■□□□□ 0
SOD3-202ENST00000593742 AOC2O75106 756 aa15.06■□□□□ 0
SOD3-202ENST00000593742 CT47B1P0C2W7 299 aaPredicted RBP15.06■□□□□ 0
SOD3-202ENST00000593742 HUNKP57058 714 aa15.06■□□□□ 0
SOD3-202ENST00000593742 IFFO2Q5TF58 517 aa15.06■□□□□ 0
SOD3-202ENST00000593742 KLHDC4Q8TBB5 520 aa15.06■□□□□ 0
SOD3-202ENST00000593742 USP44Q9H0E7 712 aa15.06■□□□□ 0
SOD3-202ENST00000593742 MYO3BQ8WXR4 1341 aa15.06■□□□□ 0
SOD3-202ENST00000593742 F8W031 263 aaPredicted RBP15.05■□□□□ -0
SOD3-202ENST00000593742 HNRNPUQ00839 825 aaKnown RBP eCLIP15.05■□□□□ -0
SOD3-202ENST00000593742 NBPF9Q3BBW0 867 aa15.05■□□□□ -0
SOD3-202ENST00000593742 METTL24Q5JXM2 366 aa15.05■□□□□ -0
SOD3-202ENST00000593742 CDCA5Q96FF9 252 aa15.05■□□□□ -0
SOD3-202ENST00000593742 GBA2Q9HCG7 927 aaPredicted RBP15.05■□□□□ -0
SOD3-202ENST00000593742 HDAC9Q9UKV0 1011 aa15.05■□□□□ -0
SOD3-202ENST00000593742 ZNF646O15015 1829 aaPredicted RBP15.05■□□□□ -0
SOD3-202ENST00000593742 IRS2Q9Y4H2 1338 aa15.04■□□□□ -0
SOD3-202ENST00000593742 GYG1P46976 350 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms