RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 H7C1W4 665 aa28.97■■■□□ 2.23
SSBP4-203ENST00000593641 FLIIQ13045 1269 aa28.97■■■□□ 2.23
SSBP4-203ENST00000593641 MYH16Q9H6N6 1097 aa28.97■■■□□ 2.23
SSBP4-203ENST00000593641 FKBP5Q13451 457 aaPredicted RBP28.96■■■□□ 2.23
SSBP4-203ENST00000593641 NCBP3Q53F19 620 aaKnown RBP28.96■■■□□ 2.23
SSBP4-203ENST00000593641 PITPNM2Q9BZ72 1349 aa28.95■■■□□ 2.23
SSBP4-203ENST00000593641 GCKRQ14397 625 aa28.95■■■□□ 2.22
SSBP4-203ENST00000593641 FBXW7Q969H0 707 aa28.95■■■□□ 2.22
SSBP4-203ENST00000593641 MRS2Q9HD23 443 aa28.95■■■□□ 2.22
SSBP4-203ENST00000593641 PAPPA2Q9BXP8 1791 aa28.94■■■□□ 2.22
SSBP4-203ENST00000593641 WTIPA6NIX2 430 aaPredicted RBP28.94■■■□□ 2.22
SSBP4-203ENST00000593641 KIF23Q02241 960 aaPredicted RBP28.94■■■□□ 2.22
SSBP4-203ENST00000593641 MPHOSPH8Q99549 860 aa28.94■■■□□ 2.22
SSBP4-203ENST00000593641 PLA2G12BQ9BX93 195 aa28.94■■■□□ 2.22
SSBP4-203ENST00000593641 MYO3BQ8WXR4 1341 aa28.94■■■□□ 2.22
SSBP4-203ENST00000593641 FANCIQ9NVI1 1328 aa28.94■■■□□ 2.22
SSBP4-203ENST00000593641 ZNF646O15015 1829 aaPredicted RBP28.93■■■□□ 2.22
SSBP4-203ENST00000593641 SLC10A3P09131 477 aa28.93■■■□□ 2.22
SSBP4-203ENST00000593641 ITGA6P23229 1130 aa28.93■■■□□ 2.22
SSBP4-203ENST00000593641 OGFOD1Q8N543 542 aa28.93■■■□□ 2.22
SSBP4-203ENST00000593641 DNAAF4Q8WXU2 420 aa28.93■■■□□ 2.22
SSBP4-203ENST00000593641 MCOLN1Q9GZU1 580 aa28.93■■■□□ 2.22
SSBP4-203ENST00000593641 COA1Q9GZY4 146 aa28.93■■■□□ 2.22
SSBP4-203ENST00000593641 SAGE1Q9NXZ1 904 aa28.93■■■□□ 2.22
SSBP4-203ENST00000593641 LEMD3Q9Y2U8 911 aa28.93■■■□□ 2.22
SSBP4-203ENST00000593641 FKBP1BP68106 108 aa28.92■■■□□ 2.22
SSBP4-203ENST00000593641 FAM161AQ3B820 660 aa28.92■■■□□ 2.22
SSBP4-203ENST00000593641 ANKRD2Q9GZV1 360 aa28.92■■■□□ 2.22
SSBP4-203ENST00000593641 DACT2Q5SW24 774 aa28.91■■■□□ 2.22
SSBP4-203ENST00000593641 STRIP1Q5VSL9 837 aa28.91■■■□□ 2.22
SSBP4-203ENST00000593641 LINS1Q8NG48 757 aa28.91■■■□□ 2.22
SSBP4-203ENST00000593641 DGKZQ13574 1117 aa28.9■■■□□ 2.22
SSBP4-203ENST00000593641 ZNF804BA4D1E1 1349 aa28.9■■■□□ 2.22
SSBP4-203ENST00000593641 KCNJ4P48050 445 aa28.88■■■□□ 2.21
SSBP4-203ENST00000593641 CASP7P55210 303 aa28.88■■■□□ 2.21
SSBP4-203ENST00000593641 MXD3Q9BW11 206 aa28.88■■■□□ 2.21
SSBP4-203ENST00000593641 SALL2Q9Y467 1007 aaPredicted RBP28.88■■■□□ 2.21
SSBP4-203ENST00000593641 ANP32CO43423 234 aa28.87■■■□□ 2.21
SSBP4-203ENST00000593641 CSF1RP07333 972 aa28.87■■■□□ 2.21
SSBP4-203ENST00000593641 NBPF9Q3BBW0 867 aa28.87■■■□□ 2.21
SSBP4-203ENST00000593641 TXNRD3Q86VQ6 643 aa28.87■■■□□ 2.21
SSBP4-203ENST00000593641 RASAL3Q86YV0 1011 aa28.87■■■□□ 2.21
SSBP4-203ENST00000593641 WDR63Q8IWG1 891 aa28.87■■■□□ 2.21
SSBP4-203ENST00000593641 REM2Q8IYK8 340 aaPredicted RBP28.87■■■□□ 2.21
SSBP4-203ENST00000593641 TRPA1O75762 1119 aa28.86■■■□□ 2.21
SSBP4-203ENST00000593641 MMP14P50281 582 aa28.86■■■□□ 2.21
SSBP4-203ENST00000593641 RNF186Q9NXI6 227 aa28.86■■■□□ 2.21
SSBP4-203ENST00000593641 SCAF8Q9UPN6 1271 aaKnown RBP28.86■■■□□ 2.21
SSBP4-203ENST00000593641 ANKRD18BA2A2Z9 1011 aa28.85■■■□□ 2.21
SSBP4-203ENST00000593641 VAMP4O75379 141 aa28.85■■■□□ 2.21
SSBP4-203ENST00000593641 TTLL5Q6EMB2 1281 aa28.85■■■□□ 2.21
SSBP4-203ENST00000593641 CSRNP1Q96S65 589 aa28.85■■■□□ 2.21
SSBP4-203ENST00000593641 HDAC9Q9UKV0 1011 aa28.85■■■□□ 2.21
SSBP4-203ENST00000593641 WNT10BO00744 389 aa28.84■■■□□ 2.21
SSBP4-203ENST00000593641 KLRK1P26718 216 aa28.84■■■□□ 2.21
SSBP4-203ENST00000593641 EXOSC9Q06265 439 aaKnown RBP28.84■■■□□ 2.21
SSBP4-203ENST00000593641 CHRNDQ07001 517 aa28.84■■■□□ 2.21
SSBP4-203ENST00000593641 NF2P35240 595 aa28.83■■■□□ 2.21
SSBP4-203ENST00000593641 TTLL12Q14166 644 aaPredicted RBP28.83■■■□□ 2.21
SSBP4-203ENST00000593641 A0A1B0GUL6 1792 aa28.83■■■□□ 2.21
SSBP4-203ENST00000593641 SASH1O94885 1247 aa28.82■■■□□ 2.2
SSBP4-203ENST00000593641 MLLT1Q03111 559 aaPredicted RBP28.82■■■□□ 2.2
SSBP4-203ENST00000593641 GTF2IP78347 998 aa28.81■■■□□ 2.2
SSBP4-203ENST00000593641 IFIT5Q13325 482 aaKnown RBP28.81■■■□□ 2.2
SSBP4-203ENST00000593641 PRAMEF18Q5VWM3 479 aa28.81■■■□□ 2.2
SSBP4-203ENST00000593641 MOB2Q70IA6 237 aa28.81■■■□□ 2.2
SSBP4-203ENST00000593641 KIAA0825Q8IV33 1275 aa28.81■■■□□ 2.2
SSBP4-203ENST00000593641 CHMP3Q9Y3E7 222 aa28.81■■■□□ 2.2
SSBP4-203ENST00000593641 RGS19P49795 217 aa28.8■■■□□ 2.2
SSBP4-203ENST00000593641 UBE2Q2LH0YL09 131 aa28.79■■■□□ 2.2
SSBP4-203ENST00000593641 APOBEC3FQ8IUX4 373 aaKnown RBP28.79■■■□□ 2.2
SSBP4-203ENST00000593641 F6X3S4 739 aa28.78■■■□□ 2.2
SSBP4-203ENST00000593641 CD209Q9NNX6 404 aa28.78■■■□□ 2.2
SSBP4-203ENST00000593641 BEND3Q5T5X7 828 aa28.77■■■□□ 2.2
SSBP4-203ENST00000593641 TAF5LO75529 589 aa28.76■■■□□ 2.19
SSBP4-203ENST00000593641 FOXO4P98177 505 aa28.76■■■□□ 2.19
SSBP4-203ENST00000593641 ECM29Q5VYK3 1845 aa28.76■■■□□ 2.19
SSBP4-203ENST00000593641 TAF7LQ5H9L4 462 aa28.75■■■□□ 2.19
SSBP4-203ENST00000593641 ZEB1P37275 1124 aaPredicted RBP28.74■■■□□ 2.19
SSBP4-203ENST00000593641 CCDC57Q2TAC2 916 aa28.74■■■□□ 2.19
SSBP4-203ENST00000593641 C15orf52Q6ZUT6 534 aaKnown RBP28.74■■■□□ 2.19
SSBP4-203ENST00000593641 ARMC9Q7Z3E5 817 aa28.74■■■□□ 2.19
SSBP4-203ENST00000593641 ZNF804AQ7Z570 1209 aa28.74■■■□□ 2.19
SSBP4-203ENST00000593641 HELBQ8NG08 1087 aaPredicted RBP28.74■■■□□ 2.19
SSBP4-203ENST00000593641 SNAP23O00161 211 aa28.73■■■□□ 2.19
SSBP4-203ENST00000593641 LMBR1LQ6UX01 489 aa28.73■■■□□ 2.19
SSBP4-203ENST00000593641 COL1A1P02452 1464 aaPredicted RBP28.72■■■□□ 2.19
SSBP4-203ENST00000593641 GRM8O00222 908 aa28.72■■■□□ 2.19
SSBP4-203ENST00000593641 DLGAP5Q15398 846 aa28.72■■■□□ 2.19
SSBP4-203ENST00000593641 SPINK5Q9NQ38 1064 aaPredicted RBP28.72■■■□□ 2.19
SSBP4-203ENST00000593641 IRS2Q9Y4H2 1338 aa28.71■■■□□ 2.19
SSBP4-203ENST00000593641 CTU1Q7Z7A3 348 aaKnown RBP28.71■■■□□ 2.19
SSBP4-203ENST00000593641 ZBED3Q96IU2 234 aaPredicted RBP28.71■■■□□ 2.19
SSBP4-203ENST00000593641 C9orf78Q9NZ63 289 aaPredicted RBP28.71■■■□□ 2.19
SSBP4-203ENST00000593641 ZNF316A6NFI3 1004 aaPredicted RBP28.7■■■□□ 2.18
SSBP4-203ENST00000593641 PRKG1Q13976 671 aa28.7■■■□□ 2.18
SSBP4-203ENST00000593641 LDHAL6AQ6ZMR3 332 aa28.7■■■□□ 2.18
SSBP4-203ENST00000593641 CNNM1Q9NRU3 951 aa28.7■■■□□ 2.18
SSBP4-203ENST00000593641 IL1R1P14778 569 aa28.69■■■□□ 2.18
SSBP4-203ENST00000593641 MKRN3Q13064 507 aaKnown RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms