RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 MAST3O60307 1309 aa13.64□□□□□ -0.23
ZNF540-210ENST00000592533 ABCC12Q96J65 1359 aa13.64□□□□□ -0.23
ZNF540-210ENST00000592533 E7EWF7 191 aa13.64□□□□□ -0.23
ZNF540-210ENST00000592533 EYA2O00167 538 aa13.64□□□□□ -0.23
ZNF540-210ENST00000592533 GOLIM4O00461 696 aa13.64□□□□□ -0.23
ZNF540-210ENST00000592533 RNF113AO15541 343 aaKnown RBP13.64□□□□□ -0.23
ZNF540-210ENST00000592533 ENGASEQ8NFI3 743 aa13.64□□□□□ -0.23
ZNF540-210ENST00000592533 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
ZNF540-210ENST00000592533 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
ZNF540-210ENST00000592533 SNW1Q13573 536 aaKnown RBP13.63□□□□□ -0.23
ZNF540-210ENST00000592533 DDX11Q96FC9 970 aa13.63□□□□□ -0.23
ZNF540-210ENST00000592533 ZNF396Q96N95 335 aaPredicted RBP13.63□□□□□ -0.23
ZNF540-210ENST00000592533 DNAJC25Q9H1X3 360 aa13.63□□□□□ -0.23
ZNF540-210ENST00000592533 AKAP11Q9UKA4 1901 aa13.63□□□□□ -0.23
ZNF540-210ENST00000592533 ABCA3Q99758 1704 aa13.63□□□□□ -0.23
ZNF540-210ENST00000592533 TOGARAM1Q9Y4F4 1720 aa13.63□□□□□ -0.23
ZNF540-210ENST00000592533 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
ZNF540-210ENST00000592533 CHAF1AQ13111 956 aaPredicted RBP13.63□□□□□ -0.23
ZNF540-210ENST00000592533 STX1AQ16623 288 aa13.63□□□□□ -0.23
ZNF540-210ENST00000592533 ZSCAN25Q6NSZ9 544 aa13.63□□□□□ -0.23
ZNF540-210ENST00000592533 MRFAP1L1Q96HT8 127 aa13.63□□□□□ -0.23
ZNF540-210ENST00000592533 ERVV-2B6SEH9 535 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 APOBRQ0VD83 1088 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 CCDC186Q7Z3E2 898 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 MYH3P11055 1940 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 XIRP1Q702N8 1843 aaKnown RBP13.62□□□□□ -0.23
ZNF540-210ENST00000592533 CARMIL3Q8ND23 1372 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 PCDH11XQ9BZA7 1347 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 PCDH11YQ9BZA8 1340 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
ZNF540-210ENST00000592533 NKX1-1Q15270 411 aaPredicted RBP13.62□□□□□ -0.23
ZNF540-210ENST00000592533 LRRC2Q9BYS8 371 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 TRIM5Q9C035 493 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 SPATA31A3Q5VYP0 1347 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 FGD1P98174 961 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 FAM160A1Q05DH4 1040 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 ILDR1Q86SU0 546 aaPredicted RBP13.62□□□□□ -0.23
ZNF540-210ENST00000592533 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
ZNF540-210ENST00000592533 ECM29Q5VYK3 1845 aa13.61□□□□□ -0.23
ZNF540-210ENST00000592533 ANKRD36CQ5JPF3 1778 aa13.61□□□□□ -0.23
ZNF540-210ENST00000592533 ATF3P18847 181 aa13.61□□□□□ -0.23
ZNF540-210ENST00000592533 SYCP1Q15431 976 aa13.61□□□□□ -0.23
ZNF540-210ENST00000592533 CCAR1Q8IX12 1150 aaKnown RBP13.61□□□□□ -0.23
ZNF540-210ENST00000592533 LRRFIP1Q32MZ4 808 aaKnown RBP13.61□□□□□ -0.23
ZNF540-210ENST00000592533 ANKRD7Q92527 254 aa13.61□□□□□ -0.23
ZNF540-210ENST00000592533 USP28Q96RU2 1077 aa13.61□□□□□ -0.23
ZNF540-210ENST00000592533 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
ZNF540-210ENST00000592533 WDR19Q8NEZ3 1342 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 NEMFO60524 1076 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 IFIT1P09914 478 aaKnown RBP13.6□□□□□ -0.23
ZNF540-210ENST00000592533 TIMM10P62072 90 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 NEUROD6Q96NK8 337 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 BCL2L12Q9HB09 334 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 A0A1B0GUL7 405 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 A0A1W2PQ27 194 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 A0A1W2PQ64 194 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 A0A1W2PQD8 194 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 RIOK3O14730 519 aaKnown RBP13.6□□□□□ -0.23
ZNF540-210ENST00000592533 ZFYP08048 801 aaPredicted RBP13.6□□□□□ -0.23
ZNF540-210ENST00000592533 RTEL1Q9NZ71 1219 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
ZNF540-210ENST00000592533 M0R2C6 588 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 LRRC24Q50LG9 513 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 CCDC73Q6ZRK6 1079 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 C11orf57Q6ZUT1 292 aaPredicted RBP13.59□□□□□ -0.23
ZNF540-210ENST00000592533 NRBP1Q9UHY1 535 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 CTNNA3Q9UI47 895 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 ARAP2Q8WZ64 1704 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 FOXP2O15409 715 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 RBM6P78332 1123 aaKnown RBP13.59□□□□□ -0.23
ZNF540-210ENST00000592533 SMAP1Q8IYB5 467 aaPredicted RBP13.59□□□□□ -0.23
ZNF540-210ENST00000592533 ISCA1Q9BUE6 129 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 FDPSP14324 419 aaKnown RBP13.59□□□□□ -0.23
ZNF540-210ENST00000592533 LRMPQ12912 555 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 PLA2G12BQ9BX93 195 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 KCND1Q9NSA2 647 aa13.59□□□□□ -0.23
ZNF540-210ENST00000592533 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.23
ZNF540-210ENST00000592533 ATRNO75882 1429 aa13.58□□□□□ -0.23
ZNF540-210ENST00000592533 A0A0G2JLW4 131 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 TRIM28Q13263 835 aaKnown RBP13.58□□□□□ -0.24
ZNF540-210ENST00000592533 CHRNA2Q15822 529 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 SLFNL1Q499Z3 407 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 DHX40Q8IX18 779 aaKnown RBP13.58□□□□□ -0.24
ZNF540-210ENST00000592533 FMR1NBQ8N0W7 255 aaPredicted RBP13.58□□□□□ -0.24
ZNF540-210ENST00000592533 ANO10Q9NW15 660 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.24
ZNF540-210ENST00000592533 SMTNL1A8MU46 457 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 GOLGA6L19H0YKK7 550 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 KINO60870 393 aaKnown RBP13.58□□□□□ -0.24
ZNF540-210ENST00000592533 CCDC144BQ3MJ40 725 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 DRC7Q8IY82 874 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 CCDC144CPQ8IYA2 1237 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 CACTINQ8WUQ7 758 aaKnown RBP13.58□□□□□ -0.24
ZNF540-210ENST00000592533 OSBP2Q969R2 916 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 FTOQ9C0B1 505 aaKnown RBP eCLIP13.58□□□□□ -0.24
ZNF540-210ENST00000592533 COL5A2P05997 1499 aaPredicted RBP13.58□□□□□ -0.24
ZNF540-210ENST00000592533 CHD4Q14839 1912 aa13.58□□□□□ -0.24
ZNF540-210ENST00000592533 CCT2P78371 535 aaKnown RBP13.57□□□□□ -0.24
ZNF540-210ENST00000592533 ADALQ6DHV7 355 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms