RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 MED23Q9ULK4 1368 aa12.94□□□□□ -0.34
VMP1-214ENST00000592106 NOGQ13253 232 aa12.94□□□□□ -0.34
VMP1-214ENST00000592106 FKBP5Q13451 457 aaPredicted RBP12.94□□□□□ -0.34
VMP1-214ENST00000592106 CWF19L2Q2TBE0 894 aaKnown RBP12.94□□□□□ -0.34
VMP1-214ENST00000592106 CCDC184Q52MB2 194 aa12.94□□□□□ -0.34
VMP1-214ENST00000592106 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
VMP1-214ENST00000592106 RSBN1LQ6PCB5 846 aaPredicted RBP12.94□□□□□ -0.34
VMP1-214ENST00000592106 UBE3BQ7Z3V4 1068 aa12.94□□□□□ -0.34
VMP1-214ENST00000592106 PODNQ7Z5L7 613 aa12.94□□□□□ -0.34
VMP1-214ENST00000592106 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
VMP1-214ENST00000592106 C2orf69Q8N8R5 385 aa12.94□□□□□ -0.34
VMP1-214ENST00000592106 TTLL11Q8NHH1 800 aa12.94□□□□□ -0.34
VMP1-214ENST00000592106 BSDC1Q9NW68 430 aaPredicted RBP12.94□□□□□ -0.34
VMP1-214ENST00000592106 FANCIQ9NVI1 1328 aa12.93□□□□□ -0.34
VMP1-214ENST00000592106 PSME4Q14997 1843 aa12.93□□□□□ -0.34
VMP1-214ENST00000592106 USP17L3A6NCW0 530 aa12.93□□□□□ -0.34
VMP1-214ENST00000592106 USP17L4A6NCW7 530 aa12.93□□□□□ -0.34
VMP1-214ENST00000592106 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
VMP1-214ENST00000592106 BRPF1P55201 1214 aaPredicted RBP12.93□□□□□ -0.34
VMP1-214ENST00000592106 HUNKP57058 714 aa12.93□□□□□ -0.34
VMP1-214ENST00000592106 USP17L1Q7RTZ2 530 aa12.93□□□□□ -0.34
VMP1-214ENST00000592106 DNAAF4Q8WXU2 420 aa12.93□□□□□ -0.34
VMP1-214ENST00000592106 GREM2Q9H772 168 aa12.93□□□□□ -0.34
VMP1-214ENST00000592106 GBA2Q9HCG7 927 aaPredicted RBP12.93□□□□□ -0.34
VMP1-214ENST00000592106 GGA3Q9NZ52 723 aa12.93□□□□□ -0.34
VMP1-214ENST00000592106 SPEF2Q9C093 1822 aa12.92□□□□□ -0.34
VMP1-214ENST00000592106 CACNA1FO60840 1977 aa12.92□□□□□ -0.34
VMP1-214ENST00000592106 MYO3BQ8WXR4 1341 aa12.92□□□□□ -0.34
VMP1-214ENST00000592106 AOC2O75106 756 aa12.92□□□□□ -0.34
VMP1-214ENST00000592106 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
VMP1-214ENST00000592106 LINS1Q8NG48 757 aa12.92□□□□□ -0.34
VMP1-214ENST00000592106 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
VMP1-214ENST00000592106 PLA2G12BQ9BX93 195 aa12.92□□□□□ -0.34
VMP1-214ENST00000592106 KCNQ5Q9NR82 932 aa12.92□□□□□ -0.34
VMP1-214ENST00000592106 LEMD3Q9Y2U8 911 aa12.92□□□□□ -0.34
VMP1-214ENST00000592106 SCN9AQ15858 1988 aa12.92□□□□□ -0.34
VMP1-214ENST00000592106 ADM5C9JUS6 153 aa12.91□□□□□ -0.34
VMP1-214ENST00000592106 H7C1W4 665 aa12.91□□□□□ -0.34
VMP1-214ENST00000592106 CCT4P50991 539 aaKnown RBP12.91□□□□□ -0.34
VMP1-214ENST00000592106 ZNF280AP59817 542 aaPredicted RBP12.91□□□□□ -0.34
VMP1-214ENST00000592106 GCKRQ14397 625 aa12.91□□□□□ -0.34
VMP1-214ENST00000592106 RGMBQ6NW40 437 aa12.91□□□□□ -0.34
VMP1-214ENST00000592106 G2E3Q7L622 706 aa12.91□□□□□ -0.34
VMP1-214ENST00000592106 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
VMP1-214ENST00000592106 ANKRD2Q9GZV1 360 aa12.91□□□□□ -0.34
VMP1-214ENST00000592106 COA1Q9GZY4 146 aa12.91□□□□□ -0.34
VMP1-214ENST00000592106 MINPP1Q9UNW1 487 aa12.91□□□□□ -0.34
VMP1-214ENST00000592106 PITPNM2Q9BZ72 1349 aa12.9□□□□□ -0.34
VMP1-214ENST00000592106 EGFRP00533 1210 aa12.9□□□□□ -0.34
VMP1-214ENST00000592106 USP17L8P0C7I0 530 aa12.9□□□□□ -0.34
VMP1-214ENST00000592106 ITGA6P23229 1130 aa12.9□□□□□ -0.34
VMP1-214ENST00000592106 KCNJ4P48050 445 aa12.9□□□□□ -0.34
VMP1-214ENST00000592106 MMP14P50281 582 aa12.9□□□□□ -0.34
VMP1-214ENST00000592106 OGFOD1Q8N543 542 aa12.9□□□□□ -0.34
VMP1-214ENST00000592106 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
VMP1-214ENST00000592106 MYOZ2Q9NPC6 264 aa12.9□□□□□ -0.34
VMP1-214ENST00000592106 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
VMP1-214ENST00000592106 ANKRD18BA2A2Z9 1011 aa12.89□□□□□ -0.35
VMP1-214ENST00000592106 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
VMP1-214ENST00000592106 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
VMP1-214ENST00000592106 VAMP4O75379 141 aa12.88□□□□□ -0.35
VMP1-214ENST00000592106 ZNF157P51786 506 aaPredicted RBP12.88□□□□□ -0.35
VMP1-214ENST00000592106 FKBP1BP68106 108 aa12.88□□□□□ -0.35
VMP1-214ENST00000592106 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
VMP1-214ENST00000592106 SCARF1Q14162 830 aa12.88□□□□□ -0.35
VMP1-214ENST00000592106 STRIP1Q5VSL9 837 aa12.88□□□□□ -0.35
VMP1-214ENST00000592106 ANGEL2Q5VTE6 544 aaKnown RBP12.88□□□□□ -0.35
VMP1-214ENST00000592106 CDCA5Q96FF9 252 aa12.88□□□□□ -0.35
VMP1-214ENST00000592106 HDAC9Q9UKV0 1011 aa12.88□□□□□ -0.35
VMP1-214ENST00000592106 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
VMP1-214ENST00000592106 ZNF804BA4D1E1 1349 aa12.88□□□□□ -0.35
VMP1-214ENST00000592106 PAPPA2Q9BXP8 1791 aa12.87□□□□□ -0.35
VMP1-214ENST00000592106 CSF1RP07333 972 aa12.87□□□□□ -0.35
VMP1-214ENST00000592106 NF2P35240 595 aa12.87□□□□□ -0.35
VMP1-214ENST00000592106 CASP7P55210 303 aa12.87□□□□□ -0.35
VMP1-214ENST00000592106 IFIT5Q13325 482 aaKnown RBP12.87□□□□□ -0.35
VMP1-214ENST00000592106 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
VMP1-214ENST00000592106 ABHD8Q96I13 439 aa12.87□□□□□ -0.35
VMP1-214ENST00000592106 GMLQ99445 158 aa12.87□□□□□ -0.35
VMP1-214ENST00000592106 SLC10A3P09131 477 aa12.86□□□□□ -0.35
VMP1-214ENST00000592106 DACT2Q5SW24 774 aa12.86□□□□□ -0.35
VMP1-214ENST00000592106 FAM9BQ8IZU0 186 aa12.86□□□□□ -0.35
VMP1-214ENST00000592106 SAGE1Q9NXZ1 904 aa12.86□□□□□ -0.35
VMP1-214ENST00000592106 TSKSQ9UJT2 592 aa12.86□□□□□ -0.35
VMP1-214ENST00000592106 POLR2AP24928 1970 aaKnown RBP12.85□□□□□ -0.35
VMP1-214ENST00000592106 CHRNDQ07001 517 aa12.85□□□□□ -0.35
VMP1-214ENST00000592106 APOBEC3FQ8IUX4 373 aaKnown RBP12.85□□□□□ -0.35
VMP1-214ENST00000592106 ASTN2O75129 1339 aaPredicted RBP12.85□□□□□ -0.35
VMP1-214ENST00000592106 FAM155AB1AL88 458 aaPredicted RBP12.84□□□□□ -0.35
VMP1-214ENST00000592106 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
VMP1-214ENST00000592106 BEND3Q5T5X7 828 aa12.84□□□□□ -0.35
VMP1-214ENST00000592106 TTLL5Q6EMB2 1281 aa12.84□□□□□ -0.35
VMP1-214ENST00000592106 DLK2Q6UY11 383 aa12.84□□□□□ -0.35
VMP1-214ENST00000592106 ZNF804AQ7Z570 1209 aa12.84□□□□□ -0.35
VMP1-214ENST00000592106 C9orf78Q9NZ63 289 aaPredicted RBP12.84□□□□□ -0.35
VMP1-214ENST00000592106 COL1A1P02452 1464 aaPredicted RBP12.84□□□□□ -0.35
VMP1-214ENST00000592106 F6X3S4 739 aa12.83□□□□□ -0.36
VMP1-214ENST00000592106 GRM8O00222 908 aa12.83□□□□□ -0.36
VMP1-214ENST00000592106 ALDH1L1O75891 902 aa12.83□□□□□ -0.36
VMP1-214ENST00000592106 GTF2IP78347 998 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms