RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 LRSAM1Q6UWE0 723 aa23.41■■□□□ 1.34
MBD3-209ENST00000592012 PI16Q6UXB8 463 aa23.41■■□□□ 1.34
MBD3-209ENST00000592012 DHX32Q7L7V1 743 aaKnown RBP23.41■■□□□ 1.34
MBD3-209ENST00000592012 LAMA4Q16363 1823 aa23.4■■□□□ 1.34
MBD3-209ENST00000592012 VPS37CA5D8V6 355 aaPredicted RBP23.4■■□□□ 1.34
MBD3-209ENST00000592012 PDCP20941 246 aa23.4■■□□□ 1.34
MBD3-209ENST00000592012 GTF3C6Q969F1 213 aa23.4■■□□□ 1.34
MBD3-209ENST00000592012 ZNF512BQ96KM6 892 aaPredicted RBP23.4■■□□□ 1.34
MBD3-209ENST00000592012 MYH14Q7Z406 1995 aaKnown RBP23.4■■□□□ 1.34
MBD3-209ENST00000592012 AKAP11Q9UKA4 1901 aa23.4■■□□□ 1.34
MBD3-209ENST00000592012 A0A0G2JLW4 131 aa23.4■■□□□ 1.34
MBD3-209ENST00000592012 MCAMP43121 646 aa23.4■■□□□ 1.34
MBD3-209ENST00000592012 RBSNQ9H1K0 784 aa23.39■■□□□ 1.33
MBD3-209ENST00000592012 NWD2Q9ULI1 1742 aa23.39■■□□□ 1.33
MBD3-209ENST00000592012 CAMTA2O94983 1202 aa23.38■■□□□ 1.33
MBD3-209ENST00000592012 EXOSC10Q01780 885 aaKnown RBP23.38■■□□□ 1.33
MBD3-209ENST00000592012 LRRC2Q9BYS8 371 aa23.38■■□□□ 1.33
MBD3-209ENST00000592012 E7EWF7 191 aa23.38■■□□□ 1.33
MBD3-209ENST00000592012 PIP4K2BP78356 416 aa23.38■■□□□ 1.33
MBD3-209ENST00000592012 DNM1Q05193 864 aaKnown RBP23.38■■□□□ 1.33
MBD3-209ENST00000592012 WASHC4Q2M389 1173 aa23.38■■□□□ 1.33
MBD3-209ENST00000592012 BRF1Q92994 677 aa23.38■■□□□ 1.33
MBD3-209ENST00000592012 FOXP2O15409 715 aa23.37■■□□□ 1.33
MBD3-209ENST00000592012 HCLS1P14317 486 aaPredicted RBP23.37■■□□□ 1.33
MBD3-209ENST00000592012 SYAP1Q96A49 352 aaPredicted RBP23.37■■□□□ 1.33
MBD3-209ENST00000592012 APPBP2Q92624 585 aa23.37■■□□□ 1.33
MBD3-209ENST00000592012 AGXT2Q9BYV1 514 aa23.37■■□□□ 1.33
MBD3-209ENST00000592012 UBE2HP62256 183 aa23.36■■□□□ 1.33
MBD3-209ENST00000592012 TTLL5Q6EMB2 1281 aa23.36■■□□□ 1.33
MBD3-209ENST00000592012 CDC37L1Q7L3B6 337 aa23.36■■□□□ 1.33
MBD3-209ENST00000592012 UTP14AQ9BVJ6 771 aaKnown RBP23.36■■□□□ 1.33
MBD3-209ENST00000592012 PUS7LQ9H0K6 701 aaKnown RBP23.36■■□□□ 1.33
MBD3-209ENST00000592012 FIBPO43427 364 aa23.36■■□□□ 1.33
MBD3-209ENST00000592012 KCNQ2O43526 872 aa23.36■■□□□ 1.33
MBD3-209ENST00000592012 RREB1Q92766 1687 aa23.36■■□□□ 1.33
MBD3-209ENST00000592012 TOM1O60784 492 aa23.35■■□□□ 1.33
MBD3-209ENST00000592012 MYH7P12883 1935 aa23.35■■□□□ 1.33
MBD3-209ENST00000592012 HSP90B1P14625 803 aaKnown RBP23.35■■□□□ 1.33
MBD3-209ENST00000592012 FGD1P98174 961 aa23.35■■□□□ 1.33
MBD3-209ENST00000592012 MROH5Q6ZUA9 1318 aa23.34■■□□□ 1.33
MBD3-209ENST00000592012 FAM177BA6PVY3 158 aa23.34■■□□□ 1.33
MBD3-209ENST00000592012 JAK2O60674 1132 aa23.34■■□□□ 1.33
MBD3-209ENST00000592012 FGFR2P21802 821 aa23.34■■□□□ 1.33
MBD3-209ENST00000592012 PARP10Q53GL7 1025 aa23.34■■□□□ 1.33
MBD3-209ENST00000592012 CICQ96RK0 1608 aaPredicted RBP23.34■■□□□ 1.33
MBD3-209ENST00000592012 SCRN1Q12765 414 aa23.34■■□□□ 1.33
MBD3-209ENST00000592012 CCDC102BQ68D86 513 aa23.34■■□□□ 1.33
MBD3-209ENST00000592012 SMARCC1Q92922 1105 aaPredicted RBP23.34■■□□□ 1.33
MBD3-209ENST00000592012 CTNNA3Q9UI47 895 aa23.34■■□□□ 1.33
MBD3-209ENST00000592012 PFKFB2O60825 505 aa23.33■■□□□ 1.33
MBD3-209ENST00000592012 FGAP02671 866 aa23.33■■□□□ 1.33
MBD3-209ENST00000592012 PUM3Q15397 648 aaKnown RBP23.33■■□□□ 1.33
MBD3-209ENST00000592012 CSPP1Q1MSJ5 1256 aa23.33■■□□□ 1.33
MBD3-209ENST00000592012 LPIN2Q92539 896 aa23.33■■□□□ 1.33
MBD3-209ENST00000592012 PPP1R9BQ96SB3 815 aa23.33■■□□□ 1.33
MBD3-209ENST00000592012 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.33■■□□□ 1.338e-7■■■■■ 37.5
MBD3-209ENST00000592012 LRP5O75197 1615 aa23.33■■□□□ 1.32
MBD3-209ENST00000592012 PHKA1P46020 1223 aa23.33■■□□□ 1.32
MBD3-209ENST00000592012 FERMT3Q86UX7 667 aa23.33■■□□□ 1.32
MBD3-209ENST00000592012 HELBQ8NG08 1087 aaPredicted RBP23.33■■□□□ 1.32
MBD3-209ENST00000592012 ARID4AP29374 1257 aaPredicted RBP23.32■■□□□ 1.32
MBD3-209ENST00000592012 CCDC173Q0VFZ6 552 aa23.32■■□□□ 1.32
MBD3-209ENST00000592012 TTF1Q15361 905 aaPredicted RBP23.32■■□□□ 1.32
MBD3-209ENST00000592012 NIP7Q9Y221 180 aaKnown RBP eCLIP23.32■■□□□ 1.32
MBD3-209ENST00000592012 ADD2P35612 726 aa23.32■■□□□ 1.32
MBD3-209ENST00000592012 SEC31BQ9NQW1 1179 aa23.32■■□□□ 1.32
MBD3-209ENST00000592012 GPAA1O43292 621 aa23.31■■□□□ 1.32
MBD3-209ENST00000592012 APOBRQ0VD83 1088 aa23.31■■□□□ 1.32
MBD3-209ENST00000592012 ZSCAN25Q6NSZ9 544 aa23.31■■□□□ 1.32
MBD3-209ENST00000592012 SMARCC2Q8TAQ2 1214 aa23.31■■□□□ 1.32
MBD3-209ENST00000592012 ANP32BQ92688 251 aaKnown RBP23.31■■□□□ 1.32
MBD3-209ENST00000592012 LLPHQ9BRT6 129 aaKnown RBP23.31■■□□□ 1.32
MBD3-209ENST00000592012 RRAGDQ9NQL2 400 aaPredicted RBP23.31■■□□□ 1.32
MBD3-209ENST00000592012 PHF14O94880 888 aa23.3■■□□□ 1.32
MBD3-209ENST00000592012 NTSR2O95665 410 aa23.3■■□□□ 1.32
MBD3-209ENST00000592012 FAM98CQ17RN3 349 aaKnown RBP23.3■■□□□ 1.32
MBD3-209ENST00000592012 SLC9C2Q5TAH2 1124 aa23.3■■□□□ 1.32
MBD3-209ENST00000592012 FBXL16Q8N461 479 aa23.3■■□□□ 1.32
MBD3-209ENST00000592012 PIH1D3Q9NQM4 214 aaKnown RBP23.3■■□□□ 1.32
MBD3-209ENST00000592012 UQCRFS1P1P0C7P4 283 aa23.3■■□□□ 1.32
MBD3-209ENST00000592012 IMMTQ16891 758 aaKnown RBP23.3■■□□□ 1.32
MBD3-209ENST00000592012 MYO5AQ9Y4I1 1855 aaKnown RBP23.29■■□□□ 1.32
MBD3-209ENST00000592012 CHST3Q7LGC8 479 aa23.29■■□□□ 1.32
MBD3-209ENST00000592012 MPHOSPH8Q99549 860 aa23.29■■□□□ 1.32
MBD3-209ENST00000592012 KRT85P78386 507 aa23.29■■□□□ 1.32
MBD3-209ENST00000592012 CCDC183Q5T5S1 534 aa23.29■■□□□ 1.32
MBD3-209ENST00000592012 FAM173BQ6P4H8 233 aa23.29■■□□□ 1.32
MBD3-209ENST00000592012 DDX60Q8IY21 1712 aaKnown RBP23.28■■□□□ 1.32
MBD3-209ENST00000592012 HAND2P61296 217 aa23.28■■□□□ 1.32
MBD3-209ENST00000592012 UBE3CQ15386 1083 aa23.28■■□□□ 1.32
MBD3-209ENST00000592012 CCDC152Q4G0S7 254 aa23.28■■□□□ 1.32
MBD3-209ENST00000592012 NSUN7Q8NE18 718 aaKnown RBP23.28■■□□□ 1.32
MBD3-209ENST00000592012 DDX11Q96FC9 970 aa23.28■■□□□ 1.32
MBD3-209ENST00000592012 ZNF274Q96GC6 653 aaPredicted RBP23.28■■□□□ 1.32
MBD3-209ENST00000592012 CTDNEP1O95476 244 aa23.27■■□□□ 1.32
MBD3-209ENST00000592012 TSPY26PQ9H489 355 aa23.27■■□□□ 1.32
MBD3-209ENST00000592012 RTL9Q8NET4 1388 aa23.27■■□□□ 1.32
MBD3-209ENST00000592012 SNAP23O00161 211 aa23.27■■□□□ 1.32
MBD3-209ENST00000592012 IDH1O75874 414 aaKnown RBP23.27■■□□□ 1.32
MBD3-209ENST00000592012 SLC5A1P13866 664 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms