RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 BCL11BQ9C0K0 894 aaPredicted RBP12.37□□□□□ -0.43
VPS25-206ENST00000591584 AFF2P51816 1311 aa12.37□□□□□ -0.43
VPS25-206ENST00000591584 HSPD1P10809 573 aaKnown RBP12.36□□□□□ -0.43
VPS25-206ENST00000591584 PDCP20941 246 aa12.36□□□□□ -0.43
VPS25-206ENST00000591584 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
VPS25-206ENST00000591584 CCDC102BQ68D86 513 aa12.36□□□□□ -0.43
VPS25-206ENST00000591584 TMED8Q6PL24 325 aaPredicted RBP12.36□□□□□ -0.43
VPS25-206ENST00000591584 ANKRD18AQ8IVF6 992 aa12.36□□□□□ -0.43
VPS25-206ENST00000591584 FBXL16Q8N461 479 aa12.36□□□□□ -0.43
VPS25-206ENST00000591584 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
VPS25-206ENST00000591584 BSDC1Q9NW68 430 aaPredicted RBP12.36□□□□□ -0.43
VPS25-206ENST00000591584 COL5A3P25940 1745 aaPredicted RBP12.36□□□□□ -0.43
VPS25-206ENST00000591584 HSPA1LP34931 641 aa12.35□□□□□ -0.43
VPS25-206ENST00000591584 ZAP70P43403 619 aa12.35□□□□□ -0.43
VPS25-206ENST00000591584 UBE4AQ14139 1066 aa12.35□□□□□ -0.43
VPS25-206ENST00000591584 IMMTQ16891 758 aaKnown RBP12.35□□□□□ -0.43
VPS25-206ENST00000591584 KLHL40Q2TBA0 621 aa12.35□□□□□ -0.43
VPS25-206ENST00000591584 TRAPPC3LQ5T215 181 aa12.35□□□□□ -0.43
VPS25-206ENST00000591584 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
VPS25-206ENST00000591584 DHX32Q7L7V1 743 aaKnown RBP12.35□□□□□ -0.43
VPS25-206ENST00000591584 SEPT12Q8IYM1 358 aa12.35□□□□□ -0.43
VPS25-206ENST00000591584 NLRP3Q96P20 1036 aa12.35□□□□□ -0.43
VPS25-206ENST00000591584 SEC62Q99442 399 aaKnown RBP12.35□□□□□ -0.43
VPS25-206ENST00000591584 MYH3P11055 1940 aa12.35□□□□□ -0.43
VPS25-206ENST00000591584 MAST3O60307 1309 aa12.35□□□□□ -0.43
VPS25-206ENST00000591584 LRP5O75197 1615 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 CYP21A2P08686 494 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 ADD2P35612 726 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 MCAMP43121 646 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 MAP3K12Q12852 859 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 CSPP1Q1MSJ5 1256 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 WASHC4Q2M389 1173 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 SLC27A3Q5K4L6 730 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 ZDHHC9Q9Y397 364 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 NDUFB9Q9Y6M9 179 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 NHSQ6T4R5 1651 aa12.34□□□□□ -0.43
VPS25-206ENST00000591584 FAM177BA6PVY3 158 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 GNPATO15228 680 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 STX6O43752 255 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 MBD3O95983 291 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 CHRNDQ07001 517 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 ME3Q16798 604 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 NOL8Q76FK4 1167 aaKnown RBP12.33□□□□□ -0.44
VPS25-206ENST00000591584 SPATA5Q8NB90 893 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 OSBP2Q969R2 916 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 LLPHQ9BRT6 129 aaKnown RBP12.33□□□□□ -0.44
VPS25-206ENST00000591584 ANKRD2Q9GZV1 360 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 QTRT2Q9H974 415 aaKnown RBP12.33□□□□□ -0.44
VPS25-206ENST00000591584 KIF3AQ9Y496 699 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
VPS25-206ENST00000591584 MYH14Q7Z406 1995 aaKnown RBP12.32□□□□□ -0.44
VPS25-206ENST00000591584 SEMA3EO15041 775 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 GNAT2P19087 354 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 NCLP19338 710 aaKnown RBP12.32□□□□□ -0.44
VPS25-206ENST00000591584 RFC4P35249 363 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 EXOSC10Q01780 885 aaKnown RBP12.32□□□□□ -0.44
VPS25-206ENST00000591584 ALX1Q15699 326 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 ERFEQ4G0M1 354 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 SLC9C2Q5TAH2 1124 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 MCTP1Q6DN14 999 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 CCDC129Q6ZRS4 1044 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
VPS25-206ENST00000591584 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 BCL2L12Q9HB09 334 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 SEC31BQ9NQW1 1179 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 LMBRD1Q9NUN5 540 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 TPCN1Q9ULQ1 816 aa12.32□□□□□ -0.44
VPS25-206ENST00000591584 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
VPS25-206ENST00000591584 BCORQ6W2J9 1755 aa12.31□□□□□ -0.44
VPS25-206ENST00000591584 GOLGA6L3A6NEY3 463 aa12.31□□□□□ -0.44
VPS25-206ENST00000591584 M0R2C6 588 aa12.31□□□□□ -0.44
VPS25-206ENST00000591584 ZSCAN22P10073 491 aaPredicted RBP12.31□□□□□ -0.44
VPS25-206ENST00000591584 PHKA1P46020 1223 aa12.31□□□□□ -0.44
VPS25-206ENST00000591584 FGD1P98174 961 aa12.31□□□□□ -0.44
VPS25-206ENST00000591584 TOB2Q14106 344 aaPredicted RBP12.31□□□□□ -0.44
VPS25-206ENST00000591584 SCARF1Q14162 830 aa12.31□□□□□ -0.44
VPS25-206ENST00000591584 CAVIN4Q5BKX8 364 aa12.31□□□□□ -0.44
VPS25-206ENST00000591584 TBC1D9BQ66K14 1250 aa12.31□□□□□ -0.44
VPS25-206ENST00000591584 CCDC83Q8IWF9 413 aa12.31□□□□□ -0.44
VPS25-206ENST00000591584 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
VPS25-206ENST00000591584 ZMYM6O95789 1325 aa12.31□□□□□ -0.44
VPS25-206ENST00000591584 E7EWF7 191 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 ZNF213O14771 459 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 GPAA1O43292 621 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 CPA1P15085 419 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 SYT1P21579 422 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 GJB2P29033 226 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 RPS8P62241 208 aaKnown RBP12.3□□□□□ -0.44
VPS25-206ENST00000591584 PKP1Q13835 747 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 Q6ZUG5 572 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 TMEM87AQ8NBN3 555 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 RGS22Q8NE09 1264 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 NCOA7Q8NI08 942 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 ZNF274Q96GC6 653 aaPredicted RBP12.3□□□□□ -0.44
VPS25-206ENST00000591584 DENND2AQ9ULE3 1009 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 PDS5AQ29RF7 1337 aaKnown RBP12.3□□□□□ -0.44
VPS25-206ENST00000591584 LAMB2P55268 1798 aa12.3□□□□□ -0.44
VPS25-206ENST00000591584 PATL2C9JE40 543 aaKnown RBP12.29□□□□□ -0.44
VPS25-206ENST00000591584 PFKFB2O60825 505 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms