RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 EHBP1Q8NDI1 1231 aa15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 TUBB4AP04350 444 aa15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 KLHL10Q6JEL2 608 aa15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 LARGE2Q8N3Y3 721 aa15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 CBX1P83916 185 aa15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 MCMDC2Q4G0Z9 681 aa15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 TTC22Q5TAA0 569 aa15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 NUP88Q99567 741 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 YEATS2Q9ULM3 1422 aa15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 GJB2P29033 226 aa15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 CCDC144CPQ8IYA2 1237 aa15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-216ENST00000591545 LIG1P18858 919 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 ERMNQ8TAM6 284 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 CARD14Q9BXL6 1004 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 SH2D4AQ9H788 454 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 MAST3O60307 1309 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 SNW1Q13573 536 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 PHACTR3Q96KR7 559 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 TAOK3Q9H2K8 898 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 PAG1Q9NWQ8 432 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 MCM9Q9NXL9 1143 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 NPHP4O75161 1426 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 SAMD9LQ8IVG5 1584 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 ZNF165P49910 485 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 IFFO1Q0D2I5 559 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 HOOK2Q96ED9 719 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 GOLGA6L10A0A0M3HER8 536 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 PDE8AO60658 829 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 CETN1Q12798 172 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 LRSAM1Q6UWE0 723 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 DPP8Q6V1X1 898 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 CKAP2LQ8IYA6 745 aa15.23■□□□□ 0.03
SMARCA4-216ENST00000591545 UBA7P41226 1012 aa15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 C16orf45Q96MC5 204 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 LRRC27Q9C0I9 530 aa15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 ZBTB43O43298 467 aa15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 ERVV-2B6SEH9 535 aa15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 PLS1Q14651 629 aa15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 TRMT1LQ7Z2T5 733 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 FAM89AQ96GI7 184 aa15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 MAGI2Q86UL8 1455 aa15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 ANAPC15P60006 121 aa15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 TMC6Q7Z403 805 aa15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 BEGAINQ9BUH8 593 aa15.22■□□□□ 0.03
SMARCA4-216ENST00000591545 ALDH1B1P30837 517 aa15.21■□□□□ 0.03
SMARCA4-216ENST00000591545 SMARCC2Q8TAQ2 1214 aa15.21■□□□□ 0.03
SMARCA4-216ENST00000591545 RXRBP28702 533 aa15.21■□□□□ 0.03
SMARCA4-216ENST00000591545 DNAJC10Q8IXB1 793 aa15.21■□□□□ 0.03
SMARCA4-216ENST00000591545 RBM27Q9P2N5 1060 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-216ENST00000591545 PA2G4Q9UQ80 394 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-216ENST00000591545 VAMP4O75379 141 aa15.21■□□□□ 0.02
SMARCA4-216ENST00000591545 HIBADHP31937 336 aaKnown RBP15.21■□□□□ 0.02
SMARCA4-216ENST00000591545 GPR162Q16538 588 aa15.21■□□□□ 0.02
SMARCA4-216ENST00000591545 SSR1P43307 286 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 TSHZ3Q63HK5 1081 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 DRC1Q96MC2 740 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 METTL22Q9BUU2 404 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 KLF18A0A0U1RQI7 1052 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 IDEP14735 1019 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 BMP15O95972 392 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 HCLS1P14317 486 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 RTN1Q16799 776 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 TTC41PQ6P2S7 1318 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 CALM1P0DP23 149 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 CALM2P0DP24 149 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 CALM3P0DP25 149 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 CCDC102BQ68D86 513 aa15.2■□□□□ 0.02
SMARCA4-216ENST00000591545 IL13P35225 146 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 ZSCAN23Q3MJ62 389 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 MAGEB6Q8N7X4 407 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 MYO5CQ9NQX4 1742 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 RNF113AO15541 343 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 CLCN1P35523 988 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 NUCB1Q02818 461 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 TDRD12Q587J7 1177 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 CEP135Q66GS9 1140 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 NIM1KQ8IY84 436 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 PICK1Q9NRD5 415 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 BIN2Q9UBW5 565 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 ITGA6P23229 1130 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 GIGYF2Q6Y7W6 1299 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 SNX21Q969T3 373 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 ZSCAN22P10073 491 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 MTIF2P46199 727 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 PDE1AP54750 535 aa15.19■□□□□ 0.02
SMARCA4-216ENST00000591545 CCDC175P0C221 793 aa15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 TRMT1Q9NXH9 659 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 A1BGP04217 495 aa15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 TEX11Q8IYF3 940 aa15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 ZNF408Q9H9D4 720 aa15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 GSTTP1A0A1W2PQM5 241 aa15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 TBCAO75347 108 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 CKAP4Q07065 602 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 SYCP3Q8IZU3 236 aa15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 RMND1Q9NWS8 449 aa15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 EYA2O00167 538 aa15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 TFCP2Q12800 502 aa15.18■□□□□ 0.02
SMARCA4-216ENST00000591545 IFI16Q16666 785 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms