RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 CCDC83Q8IWF9 413 aa13.5□□□□□ -0.25
TPM4-213ENST00000591226 SEC31BQ9NQW1 1179 aa13.5□□□□□ -0.25
TPM4-213ENST00000591226 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
TPM4-213ENST00000591226 LAMB2P55268 1798 aa13.5□□□□□ -0.25
TPM4-213ENST00000591226 M0R2C6 588 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 CYP21A2P08686 494 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 SMIM5Q71RC9 77 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 FAM43AQ8N2R8 423 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 HELBQ8NG08 1087 aaPredicted RBP13.49□□□□□ -0.25
TPM4-213ENST00000591226 ZNF652Q9Y2D9 606 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 AKAP11Q9UKA4 1901 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 IGSF3O75054 1194 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 MCAMP43121 646 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 FGD1P98174 961 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 PDE4CQ08493 712 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 ST3GAL1Q11201 340 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 ME3Q16798 604 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
TPM4-213ENST00000591226 SH2B1Q9NRF2 756 aaPredicted RBP13.49□□□□□ -0.25
TPM4-213ENST00000591226 TPCN1Q9ULQ1 816 aa13.49□□□□□ -0.25
TPM4-213ENST00000591226 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.49□□□□□ -0.25
TPM4-213ENST00000591226 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
TPM4-213ENST00000591226 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
TPM4-213ENST00000591226 DTNBO60941 627 aa13.48□□□□□ -0.25
TPM4-213ENST00000591226 KRT32Q14532 448 aa13.48□□□□□ -0.25
TPM4-213ENST00000591226 OSBP2Q969R2 916 aa13.48□□□□□ -0.25
TPM4-213ENST00000591226 NHSQ6T4R5 1651 aa13.48□□□□□ -0.25
TPM4-213ENST00000591226 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
TPM4-213ENST00000591226 DSCC1Q9BVC3 393 aa13.48□□□□□ -0.25
TPM4-213ENST00000591226 LMBRD1Q9NUN5 540 aa13.48□□□□□ -0.25
TPM4-213ENST00000591226 SMC3Q9UQE7 1217 aa13.48□□□□□ -0.25
TPM4-213ENST00000591226 HSPD1P10809 573 aaKnown RBP13.47□□□□□ -0.25
TPM4-213ENST00000591226 TOB2Q14106 344 aaPredicted RBP13.47□□□□□ -0.25
TPM4-213ENST00000591226 PUM3Q15397 648 aaKnown RBP13.47□□□□□ -0.25
TPM4-213ENST00000591226 CCDC152Q4G0S7 254 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 MEX3CQ5U5Q3 659 aaKnown RBP13.47□□□□□ -0.25
TPM4-213ENST00000591226 MYH7P12883 1935 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
TPM4-213ENST00000591226 PHKA1P46020 1223 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 LRRFIP1Q32MZ4 808 aaKnown RBP13.47□□□□□ -0.25
TPM4-213ENST00000591226 CLEC4GQ6UXB4 293 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 STOX1Q6ZVD7 989 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 NEK1Q96PY6 1258 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 MPHOSPH8Q99549 860 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 DDX49Q9Y6V7 483 aaKnown RBP13.47□□□□□ -0.25
TPM4-213ENST00000591226 ARAP2Q8WZ64 1704 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 A0A0G2JLW4 131 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 ZFYP08048 801 aaPredicted RBP13.47□□□□□ -0.25
TPM4-213ENST00000591226 FGFR2P21802 821 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 WASHC4Q2M389 1173 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 CCDC102BQ68D86 513 aa13.47□□□□□ -0.25
TPM4-213ENST00000591226 ZNF512BQ96KM6 892 aaPredicted RBP13.47□□□□□ -0.25
TPM4-213ENST00000591226 ALDH8A1Q9H2A2 487 aaPredicted RBP13.47□□□□□ -0.25
TPM4-213ENST00000591226 SCN7AQ01118 1682 aa13.46□□□□□ -0.25
TPM4-213ENST00000591226 RTL9Q8NET4 1388 aa13.46□□□□□ -0.25
TPM4-213ENST00000591226 SNAP23O00161 211 aa13.46□□□□□ -0.25
TPM4-213ENST00000591226 PRPF40AO75400 957 aaKnown RBP13.46□□□□□ -0.25
TPM4-213ENST00000591226 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.25
TPM4-213ENST00000591226 ANKRD1Q15327 319 aa13.46□□□□□ -0.25
TPM4-213ENST00000591226 KLHL40Q2TBA0 621 aa13.46□□□□□ -0.25
TPM4-213ENST00000591226 LPIN2Q92539 896 aa13.46□□□□□ -0.25
TPM4-213ENST00000591226 COL4A1P02462 1669 aa13.46□□□□□ -0.26
TPM4-213ENST00000591226 HSP90B1P14625 803 aaKnown RBP13.46□□□□□ -0.26
TPM4-213ENST00000591226 CERKQ8TCT0 537 aa13.46□□□□□ -0.26
TPM4-213ENST00000591226 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.26
TPM4-213ENST00000591226 AFF2P51816 1311 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 FSD2A1L4K1 749 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 SYT1P21579 422 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 GJB2P29033 226 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 HSPA1LP34931 641 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 FOXD4L6Q3SYB3 417 aaPredicted RBP13.45□□□□□ -0.26
TPM4-213ENST00000591226 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 FOXD4L3Q6VB84 417 aaPredicted RBP13.45□□□□□ -0.26
TPM4-213ENST00000591226 BICDL1Q6ZP65 573 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 LAMA4Q16363 1823 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 GOLGA6L3A6NEY3 463 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 ARID4AP29374 1257 aaPredicted RBP13.45□□□□□ -0.26
TPM4-213ENST00000591226 C3orf67Q6ZVT6 689 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 APPBP2Q92624 585 aa13.45□□□□□ -0.26
TPM4-213ENST00000591226 PIH1D3Q9NQM4 214 aaKnown RBP13.45□□□□□ -0.26
TPM4-213ENST00000591226 MYO5AQ9Y4I1 1855 aaKnown RBP13.44□□□□□ -0.26
TPM4-213ENST00000591226 FOXP2O15409 715 aa13.44□□□□□ -0.26
TPM4-213ENST00000591226 STX6O43752 255 aa13.44□□□□□ -0.26
TPM4-213ENST00000591226 SLC5A1P13866 664 aa13.44□□□□□ -0.26
TPM4-213ENST00000591226 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
TPM4-213ENST00000591226 PUS7LQ9H0K6 701 aaKnown RBP13.44□□□□□ -0.26
TPM4-213ENST00000591226 BCL2L12Q9HB09 334 aa13.44□□□□□ -0.26
TPM4-213ENST00000591226 CCNL1Q9UK58 526 aaPredicted RBP13.44□□□□□ -0.26
TPM4-213ENST00000591226 GNPATO15228 680 aa13.44□□□□□ -0.26
TPM4-213ENST00000591226 UQCRFS1P1P0C7P4 283 aa13.44□□□□□ -0.26
TPM4-213ENST00000591226 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
TPM4-213ENST00000591226 TBC1D9BQ66K14 1250 aa13.44□□□□□ -0.26
TPM4-213ENST00000591226 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
TPM4-213ENST00000591226 Q6ZUG5 572 aa13.44□□□□□ -0.26
TPM4-213ENST00000591226 SRP68Q9UHB9 627 aaKnown RBP13.44□□□□□ -0.26
TPM4-213ENST00000591226 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
TPM4-213ENST00000591226 L1TD1Q5T7N2 865 aaKnown RBP13.43□□□□□ -0.26
TPM4-213ENST00000591226 LRRC2Q9BYS8 371 aa13.43□□□□□ -0.26
TPM4-213ENST00000591226 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.43□□□□□ -0.26
TPM4-213ENST00000591226 CASZ1Q86V15 1759 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms