RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 VCANP13611 3396 aa8.62□□□□□ -1.03
DNMT1-222ENST00000590619 SH3TC1Q8TE82 1336 aa8.61□□□□□ -1.03
DNMT1-222ENST00000590619 BMP8BP34820 402 aa8.61□□□□□ -1.03
DNMT1-222ENST00000590619 EIF4A1P60842 406 aaKnown RBP8.61□□□□□ -1.03
DNMT1-222ENST00000590619 NKX2-3Q8TAU0 364 aa8.61□□□□□ -1.03
DNMT1-222ENST00000590619 ARHGAP39Q9C0H5 1083 aa8.61□□□□□ -1.03
DNMT1-222ENST00000590619 HTATSF1O43719 755 aaKnown RBP8.6□□□□□ -1.03
DNMT1-222ENST00000590619 EVI5O60447 810 aa8.6□□□□□ -1.03
DNMT1-222ENST00000590619 USP2O75604 605 aaPredicted RBP8.6□□□□□ -1.03
DNMT1-222ENST00000590619 GJB1P08034 283 aa8.6□□□□□ -1.03
DNMT1-222ENST00000590619 PODNQ7Z5L7 613 aa8.6□□□□□ -1.03
DNMT1-222ENST00000590619 MS4A4AQ96JQ5 239 aa8.6□□□□□ -1.03
DNMT1-222ENST00000590619 GDF15Q99988 308 aa8.6□□□□□ -1.03
DNMT1-222ENST00000590619 RSPH6AQ9H0K4 717 aa8.6□□□□□ -1.03
DNMT1-222ENST00000590619 DEFB129Q9H1M3 183 aa8.6□□□□□ -1.03
DNMT1-222ENST00000590619 RAPGEFL1Q9UHV5 662 aa8.6□□□□□ -1.03
DNMT1-222ENST00000590619 SCN9AQ15858 1988 aa8.6□□□□□ -1.03
DNMT1-222ENST00000590619 TAF1P21675 1872 aa8.6□□□□□ -1.03
DNMT1-222ENST00000590619 UNCXA6NJT0 531 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 UFL1O94874 794 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 SASH1O94885 1247 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 ANXA1P04083 346 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 BCAMP50895 628 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 LRIT3Q3SXY7 679 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 DACT2Q5SW24 774 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 OGFOD1Q8N543 542 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 ZFYVE28Q9HCC9 887 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 GGA1Q9UJY5 639 aa8.59□□□□□ -1.03
DNMT1-222ENST00000590619 PPP1R12BO60237 982 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-222ENST00000590619 CCL5P13501 91 aa8.58□□□□□ -1.04
DNMT1-222ENST00000590619 TAF1CQ15572 869 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-222ENST00000590619 PROSER3Q2NL68 480 aa8.58□□□□□ -1.04
DNMT1-222ENST00000590619 HSP90AB3PQ58FF7 597 aa8.58□□□□□ -1.04
DNMT1-222ENST00000590619 COPS6Q7L5N1 327 aa8.58□□□□□ -1.04
DNMT1-222ENST00000590619 APOBEC3FQ8IUX4 373 aaKnown RBP8.58□□□□□ -1.04
DNMT1-222ENST00000590619 BRI3BPQ8WY22 251 aa8.58□□□□□ -1.04
DNMT1-222ENST00000590619 FAM89AQ96GI7 184 aa8.58□□□□□ -1.04
DNMT1-222ENST00000590619 ZBED3Q96IU2 234 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-222ENST00000590619 RNF208Q9H0X6 261 aa8.58□□□□□ -1.04
DNMT1-222ENST00000590619 SEC31BQ9NQW1 1179 aa8.58□□□□□ -1.04
DNMT1-222ENST00000590619 PER1O15534 1290 aaPredicted RBP8.57□□□□□ -1.04
DNMT1-222ENST00000590619 GNRH1P01148 92 aa8.57□□□□□ -1.04
DNMT1-222ENST00000590619 EIF2S2P20042 333 aaKnown RBP8.57□□□□□ -1.04
DNMT1-222ENST00000590619 CTGFP29279 349 aa8.57□□□□□ -1.04
DNMT1-222ENST00000590619 PRMT2P55345 433 aa8.57□□□□□ -1.04
DNMT1-222ENST00000590619 LACTBP83111 547 aaPredicted RBP8.57□□□□□ -1.04
DNMT1-222ENST00000590619 AIMP1Q12904 312 aaKnown RBP8.57□□□□□ -1.04
DNMT1-222ENST00000590619 CC2D1BQ5T0F9 858 aaKnown RBP8.57□□□□□ -1.04
DNMT1-222ENST00000590619 FAM43AQ8N2R8 423 aa8.57□□□□□ -1.04
DNMT1-222ENST00000590619 PNISRQ8TF01 805 aaKnown RBP8.57□□□□□ -1.04
DNMT1-222ENST00000590619 KDM3BQ7LBC6 1761 aa8.57□□□□□ -1.04
DNMT1-222ENST00000590619 SPTBN5Q9NRC6 3674 aaKnown RBP8.57□□□□□ -1.04
DNMT1-222ENST00000590619 POTEB2H3BUK9 544 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 TLR2O60603 784 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 ECM2O94769 699 aaPredicted RBP8.56□□□□□ -1.04
DNMT1-222ENST00000590619 FARP2O94887 1054 aaPredicted RBP8.56□□□□□ -1.04
DNMT1-222ENST00000590619 SGPL1O95470 568 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 GRK4P32298 578 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 KIF22Q14807 665 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 SUPT20HL1Q3ZLR7 823 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 NBPF12Q5TAG4 269 aaPredicted RBP8.56□□□□□ -1.04
DNMT1-222ENST00000590619 ANKRD13AQ8IZ07 590 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 XAGE3Q8WTP9 111 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 U2AF1L4Q8WU68 220 aaKnown RBP8.56□□□□□ -1.04
DNMT1-222ENST00000590619 CNKSR2Q8WXI2 1034 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 OPTNQ96CV9 577 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 GUCD1Q96NT3 240 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 ANKRD36CQ5JPF3 1778 aa8.56□□□□□ -1.04
DNMT1-222ENST00000590619 ATP2B4P23634 1241 aa8.55□□□□□ -1.04
DNMT1-222ENST00000590619 IREB2P48200 963 aaKnown RBP8.55□□□□□ -1.04
DNMT1-222ENST00000590619 MMP14P50281 582 aa8.55□□□□□ -1.04
DNMT1-222ENST00000590619 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
DNMT1-222ENST00000590619 STRIP1Q5VSL9 837 aa8.55□□□□□ -1.04
DNMT1-222ENST00000590619 ELP3Q9H9T3 547 aa8.55□□□□□ -1.04
DNMT1-222ENST00000590619 SRRDQ9UH36 339 aa8.55□□□□□ -1.04
DNMT1-222ENST00000590619 RIPOR2Q9Y4F9 1068 aa8.55□□□□□ -1.04
DNMT1-222ENST00000590619 COL4A1P02462 1669 aa8.55□□□□□ -1.04
DNMT1-222ENST00000590619 RPTORQ8N122 1335 aa8.54□□□□□ -1.04
DNMT1-222ENST00000590619 CCL15-CCL14A0A0B4J2E2 113 aa8.54□□□□□ -1.04
DNMT1-222ENST00000590619 TFRCP02786 760 aaKnown RBP8.54□□□□□ -1.04
DNMT1-222ENST00000590619 HSPA5P11021 654 aaKnown RBP8.54□□□□□ -1.04
DNMT1-222ENST00000590619 PSMC4P43686 418 aa8.54□□□□□ -1.04
DNMT1-222ENST00000590619 CCL15Q16663 113 aa8.54□□□□□ -1.04
DNMT1-222ENST00000590619 KIAA0825Q8IV33 1275 aa8.54□□□□□ -1.04
DNMT1-222ENST00000590619 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
DNMT1-222ENST00000590619 TRIM47Q96LD4 638 aa8.54□□□□□ -1.04
DNMT1-222ENST00000590619 ISCA1Q9BUE6 129 aa8.54□□□□□ -1.04
DNMT1-222ENST00000590619 UNC93B1Q9H1C4 597 aa8.54□□□□□ -1.04
DNMT1-222ENST00000590619 ZMYND8Q9ULU4 1186 aaPredicted RBP8.54□□□□□ -1.04
DNMT1-222ENST00000590619 PCDHAC2Q9Y5I4 1007 aa8.54□□□□□ -1.04
DNMT1-222ENST00000590619 COL3A1P02461 1466 aaPredicted RBP8.53□□□□□ -1.04
DNMT1-222ENST00000590619 ATP5J2-PTCD1G3V325 749 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 IRS4O14654 1257 aaPredicted RBP8.53□□□□□ -1.04
DNMT1-222ENST00000590619 U2AF1L5P0DN76 240 aaPredicted RBP8.53□□□□□ -1.04
DNMT1-222ENST00000590619 OSBPP22059 807 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 HOXD10P28358 340 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 PLA2G5P39877 138 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 GTF2A2P52657 109 aa8.53□□□□□ -1.04
DNMT1-222ENST00000590619 U2AF1Q01081 240 aaKnown RBP eCLIP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms