RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 GGA1Q9UJY5 639 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 A0A0C4DFX4 3053 aa17.58■□□□□ 0.4
LSM12-203ENST00000590563 CEP290O15078 2479 aa17.57■□□□□ 0.4
LSM12-203ENST00000590563 WTIPA6NIX2 430 aaPredicted RBP17.57■□□□□ 0.4
LSM12-203ENST00000590563 G3V3G9 751 aa17.57■□□□□ 0.4
LSM12-203ENST00000590563 EIF2S2P20042 333 aaKnown RBP17.57■□□□□ 0.4
LSM12-203ENST00000590563 AIMP1Q12904 312 aaKnown RBP17.57■□□□□ 0.4
LSM12-203ENST00000590563 DCAF8Q5TAQ9 597 aa17.57■□□□□ 0.4
LSM12-203ENST00000590563 MYCP01106 439 aaPredicted RBP17.56■□□□□ 0.4
LSM12-203ENST00000590563 LRCH3Q96II8 777 aa17.56■□□□□ 0.4
LSM12-203ENST00000590563 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
LSM12-203ENST00000590563 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
LSM12-203ENST00000590563 CUL9Q8IWT3 2517 aa17.56■□□□□ 0.4
LSM12-203ENST00000590563 COL1A1P02452 1464 aaPredicted RBP17.56■□□□□ 0.4
LSM12-203ENST00000590563 DACT2Q5SW24 774 aa17.55■□□□□ 0.4
LSM12-203ENST00000590563 NBPF11Q86T75 865 aa17.55■□□□□ 0.4
LSM12-203ENST00000590563 SLC10A4Q96EP9 437 aa17.55■□□□□ 0.4
LSM12-203ENST00000590563 ISCA1Q9BUE6 129 aa17.55■□□□□ 0.4
LSM12-203ENST00000590563 SEC31BQ9NQW1 1179 aa17.55■□□□□ 0.4
LSM12-203ENST00000590563 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
LSM12-203ENST00000590563 ZSWIM8A7E2V4 1837 aa17.54■□□□□ 0.4
LSM12-203ENST00000590563 TESPA1A2RU30 521 aaPredicted RBP17.54■□□□□ 0.4
LSM12-203ENST00000590563 PODNQ7Z5L7 613 aa17.54■□□□□ 0.4
LSM12-203ENST00000590563 UBE2Q1Q7Z7E8 422 aa17.54■□□□□ 0.4
LSM12-203ENST00000590563 APOBEC3FQ8IUX4 373 aaKnown RBP17.54■□□□□ 0.4
LSM12-203ENST00000590563 SH3TC2Q8TF17 1288 aa17.54■□□□□ 0.4
LSM12-203ENST00000590563 ZBED3Q96IU2 234 aaPredicted RBP17.54■□□□□ 0.4
LSM12-203ENST00000590563 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
LSM12-203ENST00000590563 DPF3Q92784 378 aa17.53■□□□□ 0.4
LSM12-203ENST00000590563 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
LSM12-203ENST00000590563 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
LSM12-203ENST00000590563 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
LSM12-203ENST00000590563 COL25A1Q9BXS0 654 aaPredicted RBP17.51■□□□□ 0.39
LSM12-203ENST00000590563 A0A1W2PPC1 479 aa17.5■□□□□ 0.39
LSM12-203ENST00000590563 ATP5J2-PTCD1G3V325 749 aa17.5■□□□□ 0.39
LSM12-203ENST00000590563 OTUD7BQ6GQQ9 843 aa17.5■□□□□ 0.39
LSM12-203ENST00000590563 OGFOD1Q8N543 542 aa17.5■□□□□ 0.39
LSM12-203ENST00000590563 MED23Q9ULK4 1368 aa17.5■□□□□ 0.39
LSM12-203ENST00000590563 OTOFQ9HC10 1997 aa17.49■□□□□ 0.39
LSM12-203ENST00000590563 XDHP47989 1333 aa17.49■□□□□ 0.39
LSM12-203ENST00000590563 ZBTB7BO15156 539 aaPredicted RBP17.49■□□□□ 0.39
LSM12-203ENST00000590563 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
LSM12-203ENST00000590563 ARHGAP39Q9C0H5 1083 aa17.49■□□□□ 0.39
LSM12-203ENST00000590563 DEFB129Q9H1M3 183 aa17.49■□□□□ 0.39
LSM12-203ENST00000590563 TSPYL4Q9UJ04 414 aa17.49■□□□□ 0.39
LSM12-203ENST00000590563 MYO3BQ8WXR4 1341 aa17.48■□□□□ 0.39
LSM12-203ENST00000590563 UNCXA6NJT0 531 aa17.48■□□□□ 0.39
LSM12-203ENST00000590563 MTFR1Q15390 333 aa17.48■□□□□ 0.39
LSM12-203ENST00000590563 MS4A4AQ96JQ5 239 aa17.48■□□□□ 0.39
LSM12-203ENST00000590563 ATP2B4P23634 1241 aa17.47■□□□□ 0.39
LSM12-203ENST00000590563 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
LSM12-203ENST00000590563 STRIP1Q5VSL9 837 aa17.47■□□□□ 0.39
LSM12-203ENST00000590563 PLBD2Q8NHP8 589 aa17.47■□□□□ 0.39
LSM12-203ENST00000590563 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
LSM12-203ENST00000590563 BRI3BPQ8WY22 251 aa17.46■□□□□ 0.39
LSM12-203ENST00000590563 PPP1R12BO60237 982 aaPredicted RBP17.45■□□□□ 0.38
LSM12-203ENST00000590563 KIAA0825Q8IV33 1275 aa17.45■□□□□ 0.38
LSM12-203ENST00000590563 FBXW7Q969H0 707 aa17.45■□□□□ 0.38
LSM12-203ENST00000590563 PPP2R3BQ9Y5P8 575 aa17.45■□□□□ 0.38
LSM12-203ENST00000590563 UNC80Q8N2C7 3258 aa17.45■□□□□ 0.38
LSM12-203ENST00000590563 USP2O75604 605 aaPredicted RBP17.44■□□□□ 0.38
LSM12-203ENST00000590563 MMP14P50281 582 aa17.44■□□□□ 0.38
LSM12-203ENST00000590563 ARHGEF6Q15052 776 aa17.44■□□□□ 0.38
LSM12-203ENST00000590563 TAF1CQ15572 869 aaPredicted RBP17.44■□□□□ 0.38
LSM12-203ENST00000590563 HTATIP2Q9BUP3 242 aa17.44■□□□□ 0.38
LSM12-203ENST00000590563 CHPF2Q9P2E5 772 aa17.44■□□□□ 0.38
LSM12-203ENST00000590563 STXBP5LQ9Y2K9 1186 aa17.44■□□□□ 0.38
LSM12-203ENST00000590563 PCDHAC2Q9Y5I4 1007 aa17.44■□□□□ 0.38
LSM12-203ENST00000590563 ZNF804BA4D1E1 1349 aa17.44■□□□□ 0.38
LSM12-203ENST00000590563 GJA8P48165 433 aa17.43■□□□□ 0.38
LSM12-203ENST00000590563 TRIM28Q13263 835 aaKnown RBP17.43■□□□□ 0.38
LSM12-203ENST00000590563 KRT24Q2M2I5 525 aa17.43■□□□□ 0.38
LSM12-203ENST00000590563 NBPF12Q5TAG4 269 aaPredicted RBP17.43■□□□□ 0.38
LSM12-203ENST00000590563 ANKRD13DQ6ZTN6 518 aa17.43■□□□□ 0.38
LSM12-203ENST00000590563 TXNRD3Q86VQ6 643 aa17.43■□□□□ 0.38
LSM12-203ENST00000590563 FAM43AQ8N2R8 423 aa17.43■□□□□ 0.38
LSM12-203ENST00000590563 OPTNQ96CV9 577 aa17.43■□□□□ 0.38
LSM12-203ENST00000590563 ZFYVE28Q9HCC9 887 aa17.43■□□□□ 0.38
LSM12-203ENST00000590563 AOX1Q06278 1338 aa17.43■□□□□ 0.38
LSM12-203ENST00000590563 ECM29Q5VYK3 1845 aa17.42■□□□□ 0.38
LSM12-203ENST00000590563 LACTBP83111 547 aaPredicted RBP17.42■□□□□ 0.38
LSM12-203ENST00000590563 Q7L0L9 218 aa17.42■□□□□ 0.38
LSM12-203ENST00000590563 ANKRD13AQ8IZ07 590 aa17.42■□□□□ 0.38
LSM12-203ENST00000590563 ZBTB38Q8NAP3 1195 aaPredicted RBP17.42■□□□□ 0.38
LSM12-203ENST00000590563 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
LSM12-203ENST00000590563 CCDC85AQ96PX6 553 aaPredicted RBP17.42■□□□□ 0.38
LSM12-203ENST00000590563 ELP3Q9H9T3 547 aa17.42■□□□□ 0.38
LSM12-203ENST00000590563 NR2E3Q9Y5X4 410 aa17.42■□□□□ 0.38
LSM12-203ENST00000590563 CTGFP29279 349 aa17.41■□□□□ 0.38
LSM12-203ENST00000590563 IREB2P48200 963 aaKnown RBP17.41■□□□□ 0.38
LSM12-203ENST00000590563 CCDC152Q4G0S7 254 aa17.41■□□□□ 0.38
LSM12-203ENST00000590563 GPR153Q6NV75 609 aa17.41■□□□□ 0.38
LSM12-203ENST00000590563 DEFB123Q8N688 67 aa17.41■□□□□ 0.38
LSM12-203ENST00000590563 COA1Q9GZY4 146 aa17.41■□□□□ 0.38
LSM12-203ENST00000590563 ANKRD18AQ8IVF6 992 aa17.4■□□□□ 0.38
LSM12-203ENST00000590563 MTMR14Q8NCE2 650 aa17.4■□□□□ 0.38
LSM12-203ENST00000590563 NKX2-3Q8TAU0 364 aa17.4■□□□□ 0.38
LSM12-203ENST00000590563 STAP2Q9UGK3 403 aa17.4■□□□□ 0.38
LSM12-203ENST00000590563 CLSPNQ9HAW4 1339 aa17.4■□□□□ 0.38
LSM12-203ENST00000590563 CCL15-CCL14A0A0B4J2E2 113 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms