RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 APOBRQ0VD83 1088 aa17.58■□□□□ 0.4
CIRBP-228ENST00000590347 ATRIPQ8WXE1 791 aa17.58■□□□□ 0.4
CIRBP-228ENST00000590347 DNAAF4Q8WXU2 420 aa17.58■□□□□ 0.4
CIRBP-228ENST00000590347 SEC62Q99442 399 aaKnown RBP17.58■□□□□ 0.4
CIRBP-228ENST00000590347 LMOD2Q6P5Q4 547 aa17.58■□□□□ 0.4
CIRBP-228ENST00000590347 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
CIRBP-228ENST00000590347 PPM1EQ8WY54 764 aa17.57■□□□□ 0.4
CIRBP-228ENST00000590347 CLIC6Q96NY7 704 aa17.57■□□□□ 0.4
CIRBP-228ENST00000590347 ANO10Q9NW15 660 aa17.57■□□□□ 0.4
CIRBP-228ENST00000590347 ATP7BP35670 1465 aa17.57■□□□□ 0.4
CIRBP-228ENST00000590347 PLEKHG1Q9ULL1 1385 aa17.57■□□□□ 0.4
CIRBP-228ENST00000590347 PPARDQ03181 441 aa17.57■□□□□ 0.4
CIRBP-228ENST00000590347 CNTROBQ8N137 903 aa17.57■□□□□ 0.4
CIRBP-228ENST00000590347 ANKRD20A12PQ8NF67 263 aa17.57■□□□□ 0.4
CIRBP-228ENST00000590347 RIN2Q8WYP3 895 aaPredicted RBP17.57■□□□□ 0.4
CIRBP-228ENST00000590347 SH2B1Q9NRF2 756 aaPredicted RBP17.57■□□□□ 0.4
CIRBP-228ENST00000590347 PNKPQ96T60 521 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 SCP2P22307 547 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 AMPHP49418 695 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 MCTP2Q6DN12 878 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 EHD4Q9H223 541 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 ZSCAN16Q9H4T2 348 aaPredicted RBP17.56■□□□□ 0.4
CIRBP-228ENST00000590347 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 ADCY9O60503 1353 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 IVLP07476 585 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 CORO7P57737 925 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 TTC19Q6DKK2 380 aaPredicted RBP17.56■□□□□ 0.4
CIRBP-228ENST00000590347 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 ZSCAN31Q96LW9 406 aaPredicted RBP17.56■□□□□ 0.4
CIRBP-228ENST00000590347 USP28Q96RU2 1077 aa17.56■□□□□ 0.4
CIRBP-228ENST00000590347 DLC1Q96QB1 1528 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 PSDA5PKW4 1024 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-228ENST00000590347 VWA3AA6NCI4 1184 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 ZKSCAN1P17029 563 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-228ENST00000590347 ATP8B2P98198 1209 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 ATP2B2Q01814 1243 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 CREB3L3Q68CJ9 461 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 CCDC91Q7Z6B0 441 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 CCDC12Q8WUD4 166 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-228ENST00000590347 OSBPL5Q9H0X9 879 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-228ENST00000590347 ABCB6Q9NP58 842 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 SSH2Q76I76 1423 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 TDO2P48775 406 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 PPP2R5AQ15172 486 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 CFAP100Q494V2 611 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 GPR161Q8N6U8 529 aaKnown RBP17.55■□□□□ 0.4
CIRBP-228ENST00000590347 LZTFL1Q9NQ48 299 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 STAP2Q9UGK3 403 aa17.55■□□□□ 0.4
CIRBP-228ENST00000590347 RHPN1Q8TCX5 695 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 FAM204AQ9H8W3 233 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 POLD4Q9HCU8 107 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 RAI14Q9P0K7 980 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 SETD1AO15047 1707 aaKnown RBP17.54■□□□□ 0.4
CIRBP-228ENST00000590347 SOS1Q07889 1333 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-228ENST00000590347 MAP3K19Q56UN5 1328 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 NRDCO43847 1150 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 PDCP20941 246 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 TOGARAM2Q6ZUX3 1019 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 TBX22Q9Y458 520 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 SRGAP3O43295 1099 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 CHGBP05060 677 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 OTUD7BQ6GQQ9 843 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 MMS22LQ6ZRQ5 1243 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 USHBP1Q8N6Y0 703 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 ABTB2Q8N961 1025 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 CCDC150Q8NCX0 1101 aa17.54■□□□□ 0.4
CIRBP-228ENST00000590347 SERPINC1P01008 464 aa17.53■□□□□ 0.4
CIRBP-228ENST00000590347 ADKP55263 362 aaKnown RBP17.53■□□□□ 0.4
CIRBP-228ENST00000590347 UBR1Q8IWV7 1749 aa17.53■□□□□ 0.4
CIRBP-228ENST00000590347 RESTQ13127 1097 aa17.53■□□□□ 0.4
CIRBP-228ENST00000590347 MTF1Q14872 753 aa17.53■□□□□ 0.4
CIRBP-228ENST00000590347 BLOC1S2Q6QNY1 142 aa17.53■□□□□ 0.4
CIRBP-228ENST00000590347 TSPYL4Q9UJ04 414 aa17.53■□□□□ 0.4
CIRBP-228ENST00000590347 PHLPP2Q6ZVD8 1323 aa17.53■□□□□ 0.4
CIRBP-228ENST00000590347 MAP2P11137 1827 aaKnown RBP17.52■□□□□ 0.4
CIRBP-228ENST00000590347 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.52■□□□□ 0.4
CIRBP-228ENST00000590347 TADA2BQ86TJ2 420 aa17.52■□□□□ 0.4
CIRBP-228ENST00000590347 ZNF526Q8TF50 670 aaPredicted RBP17.52■□□□□ 0.4
CIRBP-228ENST00000590347 JPH2Q9BR39 696 aaPredicted RBP17.52■□□□□ 0.4
CIRBP-228ENST00000590347 SLC24A3Q9HC58 644 aa17.52■□□□□ 0.4
CIRBP-228ENST00000590347 PPP2R2CQ9Y2T4 447 aa17.52■□□□□ 0.4
CIRBP-228ENST00000590347 CCT2P78371 535 aaKnown RBP17.52■□□□□ 0.4
CIRBP-228ENST00000590347 FANCCQ00597 558 aa17.52■□□□□ 0.4
CIRBP-228ENST00000590347 WDHD1O75717 1129 aaPredicted RBP17.52■□□□□ 0.39
CIRBP-228ENST00000590347 CCT4P50991 539 aaKnown RBP17.52■□□□□ 0.39
CIRBP-228ENST00000590347 JAKMIP3Q5VZ66 844 aa17.52■□□□□ 0.39
CIRBP-228ENST00000590347 PLEKHG3A1L390 1219 aa17.51■□□□□ 0.39
CIRBP-228ENST00000590347 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-228ENST00000590347 CCT5P48643 541 aa17.51■□□□□ 0.39
CIRBP-228ENST00000590347 TOB2Q14106 344 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-228ENST00000590347 STK11IPQ8N1F8 1099 aa17.51■□□□□ 0.39
CIRBP-228ENST00000590347 FRMD3A2A2Y4 597 aa17.51■□□□□ 0.39
CIRBP-228ENST00000590347 GOLGA1Q92805 767 aa17.51■□□□□ 0.39
CIRBP-228ENST00000590347 NDUFB9Q9Y6M9 179 aa17.51■□□□□ 0.39
CIRBP-228ENST00000590347 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-228ENST00000590347 ATP6V1AP38606 617 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 NDUFA8P51970 172 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 ESCO1Q5FWF5 840 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 EDC3Q96F86 508 aaKnown RBP17.5■□□□□ 0.39
CIRBP-228ENST00000590347 CCDC9Q9Y3X0 531 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms