RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 MPHOSPH8Q99549 860 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 GLIS2Q9BZE0 524 aaPredicted RBP9.65□□□□□ -0.86
NPC1-208ENST00000590301 COA1Q9GZY4 146 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 LAMB2P55268 1798 aa9.65□□□□□ -0.87
NPC1-208ENST00000590301 MYO3BQ8WXR4 1341 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 ANKRD18BA2A2Z9 1011 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 E9PSI1 815 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 FOXN1O15353 648 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 ALDH1L1O75891 902 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 USP17L8P0C7I0 530 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 IFIT5Q13325 482 aaKnown RBP9.64□□□□□ -0.87
NPC1-208ENST00000590301 KIF4BQ2VIQ3 1234 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 FAM161AQ3B820 660 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 SAMD7Q7Z3H4 446 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 KRT26Q7Z3Y9 468 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 GMLQ99445 158 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 KCNQ5Q9NR82 932 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 PCNTO95613 3336 aa9.64□□□□□ -0.87
NPC1-208ENST00000590301 ZNF804BA4D1E1 1349 aa9.63□□□□□ -0.87
NPC1-208ENST00000590301 SHTN1A0MZ66 631 aa9.63□□□□□ -0.87
NPC1-208ENST00000590301 GRM8O00222 908 aa9.63□□□□□ -0.87
NPC1-208ENST00000590301 CA12O43570 354 aa9.63□□□□□ -0.87
NPC1-208ENST00000590301 FMR1Q06787 632 aaKnown RBP eCLIP9.63□□□□□ -0.87
NPC1-208ENST00000590301 STRIP1Q5VSL9 837 aa9.63□□□□□ -0.87
NPC1-208ENST00000590301 PAXIP1Q6ZW49 1069 aaPredicted RBP9.63□□□□□ -0.87
NPC1-208ENST00000590301 USP48Q86UV5 1035 aa9.63□□□□□ -0.87
NPC1-208ENST00000590301 SULF1Q8IWU6 871 aa9.63□□□□□ -0.87
NPC1-208ENST00000590301 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
NPC1-208ENST00000590301 BEGAINQ9BUH8 593 aa9.63□□□□□ -0.87
NPC1-208ENST00000590301 PITPNM2Q9BZ72 1349 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 COL4A1P02462 1669 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 F6X3S4 739 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 KCNJ4P48050 445 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 FOXO4P98177 505 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 NOGQ13253 232 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 CYP4F22Q6NT55 531 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 C15orf52Q6ZUT6 534 aaKnown RBP9.62□□□□□ -0.87
NPC1-208ENST00000590301 C2orf69Q8N8R5 385 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 BBXQ8WY36 941 aaPredicted RBP9.62□□□□□ -0.87
NPC1-208ENST00000590301 SRCIN1Q9C0H9 1055 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 ZNF408Q9H9D4 720 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 MYOZ2Q9NPC6 264 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 GGA3Q9NZ52 723 aa9.62□□□□□ -0.87
NPC1-208ENST00000590301 C9orf78Q9NZ63 289 aaPredicted RBP9.62□□□□□ -0.87
NPC1-208ENST00000590301 PTPRCP08575 1304 aa9.61□□□□□ -0.87
NPC1-208ENST00000590301 EGFRP00533 1210 aa9.61□□□□□ -0.87
NPC1-208ENST00000590301 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
NPC1-208ENST00000590301 HUNKP57058 714 aa9.61□□□□□ -0.87
NPC1-208ENST00000590301 FKBP1BP68106 108 aa9.61□□□□□ -0.87
NPC1-208ENST00000590301 CHRNDQ07001 517 aa9.61□□□□□ -0.87
NPC1-208ENST00000590301 CCDC57Q2TAC2 916 aa9.61□□□□□ -0.87
NPC1-208ENST00000590301 DACT2Q5SW24 774 aa9.61□□□□□ -0.87
NPC1-208ENST00000590301 RBM26Q5T8P6 1007 aaKnown RBP9.61□□□□□ -0.87
NPC1-208ENST00000590301 GBA2Q9HCG7 927 aaPredicted RBP9.61□□□□□ -0.87
NPC1-208ENST00000590301 SCARF1Q14162 830 aa9.6□□□□□ -0.87
NPC1-208ENST00000590301 TAF7LQ5H9L4 462 aa9.6□□□□□ -0.87
NPC1-208ENST00000590301 ANGEL2Q5VTE6 544 aaKnown RBP9.6□□□□□ -0.87
NPC1-208ENST00000590301 SLC4A10Q6U841 1118 aa9.6□□□□□ -0.87
NPC1-208ENST00000590301 LMBR1LQ6UX01 489 aa9.6□□□□□ -0.87
NPC1-208ENST00000590301 IFNLR1Q8IU57 520 aaPredicted RBP9.6□□□□□ -0.87
NPC1-208ENST00000590301 CCDC102AQ96A19 550 aa9.6□□□□□ -0.87
NPC1-208ENST00000590301 CHMP3Q9Y3E7 222 aa9.6□□□□□ -0.87
NPC1-208ENST00000590301 UTYO14607 1347 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 WTIPA6NIX2 430 aaPredicted RBP9.59□□□□□ -0.87
NPC1-208ENST00000590301 ADM5C9JUS6 153 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 CCER2I3L3R5 266 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 CT47B1P0C2W7 299 aaPredicted RBP9.59□□□□□ -0.87
NPC1-208ENST00000590301 HSPA8P11142 646 aaKnown RBP9.59□□□□□ -0.87
NPC1-208ENST00000590301 LBX1P52954 281 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 GRM1Q13255 1194 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 ALDH1L2Q3SY69 923 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 TTLL5Q6EMB2 1281 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 RGMBQ6NW40 437 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 LDHAL6AQ6ZMR3 332 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 ZNF804AQ7Z570 1209 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 CDCA5Q96FF9 252 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 HDAC9Q9UKV0 1011 aa9.59□□□□□ -0.87
NPC1-208ENST00000590301 THSD7BQ9C0I4 1608 aa9.58□□□□□ -0.88
NPC1-208ENST00000590301 FKBP1AP62942 108 aaKnown RBP9.58□□□□□ -0.88
NPC1-208ENST00000590301 SLFN5Q08AF3 891 aa9.58□□□□□ -0.88
NPC1-208ENST00000590301 EPHA10Q5JZY3 1008 aa9.58□□□□□ -0.88
NPC1-208ENST00000590301 TXNRD3Q86VQ6 643 aa9.58□□□□□ -0.88
NPC1-208ENST00000590301 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
NPC1-208ENST00000590301 MRPL50Q8N5N7 158 aaKnown RBP9.58□□□□□ -0.88
NPC1-208ENST00000590301 FBXW7Q969H0 707 aa9.58□□□□□ -0.88
NPC1-208ENST00000590301 CD209Q9NNX6 404 aa9.58□□□□□ -0.88
NPC1-208ENST00000590301 CNNM1Q9NRU3 951 aa9.58□□□□□ -0.88
NPC1-208ENST00000590301 IRS2Q9Y4H2 1338 aa9.57□□□□□ -0.88
NPC1-208ENST00000590301 AOC2O75106 756 aa9.57□□□□□ -0.88
NPC1-208ENST00000590301 IL1R1P14778 569 aa9.57□□□□□ -0.88
NPC1-208ENST00000590301 NF2P35240 595 aa9.57□□□□□ -0.88
NPC1-208ENST00000590301 GTF2IP78347 998 aa9.57□□□□□ -0.88
NPC1-208ENST00000590301 UBE4AQ14139 1066 aa9.57□□□□□ -0.88
NPC1-208ENST00000590301 RABL6Q3YEC7 729 aaPredicted RBP9.57□□□□□ -0.88
NPC1-208ENST00000590301 APOBEC3FQ8IUX4 373 aaKnown RBP9.57□□□□□ -0.88
NPC1-208ENST00000590301 SSH1Q8WYL5 1049 aa9.57□□□□□ -0.88
NPC1-208ENST00000590301 SAGE1Q9NXZ1 904 aa9.57□□□□□ -0.88
NPC1-208ENST00000590301 MROH5Q6ZUA9 1318 aa9.56□□□□□ -0.88
NPC1-208ENST00000590301 WNT10BO00744 389 aa9.56□□□□□ -0.88
NPC1-208ENST00000590301 TAF5LO75529 589 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms