RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 SIL1Q9H173 461 aa17.55■□□□□ 0.4
SCAMP4-212ENST00000590266 MICALL2Q8IY33 904 aa17.54■□□□□ 0.4
SCAMP4-212ENST00000590266 COA1Q9GZY4 146 aa17.54■□□□□ 0.4
SCAMP4-212ENST00000590266 CNOT7Q9UIV1 285 aaKnown RBP17.54■□□□□ 0.4
SCAMP4-212ENST00000590266 RCAN3Q9UKA8 241 aa17.54■□□□□ 0.4
SCAMP4-212ENST00000590266 MROH5Q6ZUA9 1318 aa17.53■□□□□ 0.4
SCAMP4-212ENST00000590266 RLBP1P12271 317 aa17.53■□□□□ 0.4
SCAMP4-212ENST00000590266 PODNQ7Z5L7 613 aa17.53■□□□□ 0.4
SCAMP4-212ENST00000590266 ADARB2Q9NS39 739 aaKnown RBP17.53■□□□□ 0.4
SCAMP4-212ENST00000590266 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
SCAMP4-212ENST00000590266 USP17L3A6NCW0 530 aa17.52■□□□□ 0.4
SCAMP4-212ENST00000590266 USP17L4A6NCW7 530 aa17.52■□□□□ 0.4
SCAMP4-212ENST00000590266 H7C1D1 291 aa17.52■□□□□ 0.4
SCAMP4-212ENST00000590266 RBM26Q5T8P6 1007 aaKnown RBP17.52■□□□□ 0.4
SCAMP4-212ENST00000590266 IFFO2Q5TF58 517 aa17.52■□□□□ 0.4
SCAMP4-212ENST00000590266 MAP1SQ66K74 1059 aaPredicted RBP17.52■□□□□ 0.4
SCAMP4-212ENST00000590266 USP17L1Q7RTZ2 530 aa17.52■□□□□ 0.4
SCAMP4-212ENST00000590266 PANK1Q8TE04 598 aa17.52■□□□□ 0.4
SCAMP4-212ENST00000590266 GNAI2P04899 355 aa17.51■□□□□ 0.39
SCAMP4-212ENST00000590266 VIL1P09327 827 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-212ENST00000590266 RFX5P48382 616 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-212ENST00000590266 PTPN12Q05209 780 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-212ENST00000590266 RSBN1LQ6PCB5 846 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-212ENST00000590266 USP50Q70EL3 339 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-212ENST00000590266 ZNF804AQ7Z570 1209 aa17.51■□□□□ 0.39
SCAMP4-212ENST00000590266 TRPM4Q8TD43 1214 aa17.51■□□□□ 0.39
SCAMP4-212ENST00000590266 MXD3Q9BW11 206 aa17.51■□□□□ 0.39
SCAMP4-212ENST00000590266 PA2G4Q9UQ80 394 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-212ENST00000590266 EYA2O00167 538 aa17.5■□□□□ 0.39
SCAMP4-212ENST00000590266 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
SCAMP4-212ENST00000590266 RPS12P25398 132 aaKnown RBP17.5■□□□□ 0.39
SCAMP4-212ENST00000590266 TBC1D10BQ4KMP7 808 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-212ENST00000590266 SAMD7Q7Z3H4 446 aa17.5■□□□□ 0.39
SCAMP4-212ENST00000590266 C1orf115Q9H7X2 142 aa17.5■□□□□ 0.39
SCAMP4-212ENST00000590266 GYG1P46976 350 aa17.49■□□□□ 0.39
SCAMP4-212ENST00000590266 GTF2IP78347 998 aa17.49■□□□□ 0.39
SCAMP4-212ENST00000590266 UBE4AQ14139 1066 aa17.49■□□□□ 0.39
SCAMP4-212ENST00000590266 JMYQ8N9B5 988 aa17.49■□□□□ 0.39
SCAMP4-212ENST00000590266 DPF2Q92785 391 aa17.49■□□□□ 0.39
SCAMP4-212ENST00000590266 CD209Q9NNX6 404 aa17.49■□□□□ 0.39
SCAMP4-212ENST00000590266 JAG2Q9Y219 1238 aa17.49■□□□□ 0.39
SCAMP4-212ENST00000590266 PDE8BO95263 885 aa17.48■□□□□ 0.39
SCAMP4-212ENST00000590266 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
SCAMP4-212ENST00000590266 VPS37DQ86XT2 251 aa17.48■□□□□ 0.39
SCAMP4-212ENST00000590266 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
SCAMP4-212ENST00000590266 IRS2Q9Y4H2 1338 aa17.47■□□□□ 0.39
SCAMP4-212ENST00000590266 SCN4AP35499 1836 aa17.47■□□□□ 0.39
SCAMP4-212ENST00000590266 EGFRP00533 1210 aa17.47■□□□□ 0.39
SCAMP4-212ENST00000590266 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
SCAMP4-212ENST00000590266 STRIP1Q5VSL9 837 aa17.47■□□□□ 0.39
SCAMP4-212ENST00000590266 C15orf52Q6ZUT6 534 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-212ENST00000590266 ATG9AQ7Z3C6 839 aa17.47■□□□□ 0.39
SCAMP4-212ENST00000590266 AGBL3Q8NEM8 1001 aa17.47■□□□□ 0.39
SCAMP4-212ENST00000590266 MS4A1P11836 297 aa17.46■□□□□ 0.39
SCAMP4-212ENST00000590266 HIBADHP31937 336 aaKnown RBP17.46■□□□□ 0.39
SCAMP4-212ENST00000590266 HIRAP54198 1017 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-212ENST00000590266 PUM3Q15397 648 aaKnown RBP17.46■□□□□ 0.39
SCAMP4-212ENST00000590266 KIF4BQ2VIQ3 1234 aa17.46■□□□□ 0.39
SCAMP4-212ENST00000590266 VGLL2Q8N8G2 317 aa17.46■□□□□ 0.39
SCAMP4-212ENST00000590266 CREBZFQ9NS37 354 aa17.46■□□□□ 0.39
SCAMP4-212ENST00000590266 IQSEC3Q9UPP2 1182 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-212ENST00000590266 PNMA6EA0A0J9YXQ4 647 aa17.45■□□□□ 0.38
SCAMP4-212ENST00000590266 FRAT2O75474 233 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-212ENST00000590266 IFIT1P09914 478 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-212ENST00000590266 USP17L8P0C7I0 530 aa17.45■□□□□ 0.38
SCAMP4-212ENST00000590266 CAVIN4Q5BKX8 364 aa17.45■□□□□ 0.38
SCAMP4-212ENST00000590266 KIAA0825Q8IV33 1275 aa17.45■□□□□ 0.38
SCAMP4-212ENST00000590266 CEP126Q9P2H0 1117 aa17.45■□□□□ 0.38
SCAMP4-212ENST00000590266 COG6Q9Y2V7 657 aa17.45■□□□□ 0.38
SCAMP4-212ENST00000590266 F8W031 263 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 CIAO1O76071 339 aa17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 SLC5A1P13866 664 aa17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 IL1R1P14778 569 aa17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 IL15P40933 162 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 FMR1Q06787 632 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 MTX1Q13505 466 aa17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 OGFOD1Q8N543 542 aa17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 FAM84BQ96KN1 310 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 GMLQ99445 158 aa17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 COPRSQ9NQ92 184 aa17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 MKRN1Q9UHC7 482 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 MYO3BQ8WXR4 1341 aa17.44■□□□□ 0.38
SCAMP4-212ENST00000590266 TRAF5O00463 557 aa17.43■□□□□ 0.38
SCAMP4-212ENST00000590266 ITGBL1O95965 494 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-212ENST00000590266 BCAMP50895 628 aa17.43■□□□□ 0.38
SCAMP4-212ENST00000590266 CHAF1AQ13111 956 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-212ENST00000590266 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-212ENST00000590266 GLIS2Q9BZE0 524 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-212ENST00000590266 MYOZ2Q9NPC6 264 aa17.43■□□□□ 0.38
SCAMP4-212ENST00000590266 FBXO3Q9UK99 471 aa17.43■□□□□ 0.38
SCAMP4-212ENST00000590266 ZNF280AP59817 542 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-212ENST00000590266 MVPQ14764 893 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-212ENST00000590266 ATP2B3Q16720 1220 aa17.42■□□□□ 0.38
SCAMP4-212ENST00000590266 LPIN2Q92539 896 aa17.42■□□□□ 0.38
SCAMP4-212ENST00000590266 ASTN2O75129 1339 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-212ENST00000590266 PASKQ96RG2 1323 aa17.42■□□□□ 0.38
SCAMP4-212ENST00000590266 ADAMTSL1Q8N6G6 1762 aa17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 SCN9AQ15858 1988 aa17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 TMEM88BA6NKF7 163 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms