RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 PSMD14O00487 310 aa10.54□□□□□ -0.72
TPM4-211ENST00000589897 ATP2B4P23634 1241 aa10.54□□□□□ -0.72
TPM4-211ENST00000589897 FKBP1BP68106 108 aa10.54□□□□□ -0.72
TPM4-211ENST00000589897 SULF1Q8IWU6 871 aa10.54□□□□□ -0.72
TPM4-211ENST00000589897 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
TPM4-211ENST00000589897 MPHOSPH8Q99549 860 aa10.54□□□□□ -0.72
TPM4-211ENST00000589897 GREM2Q9H772 168 aa10.54□□□□□ -0.72
TPM4-211ENST00000589897 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
TPM4-211ENST00000589897 CHMP3Q9Y3E7 222 aa10.54□□□□□ -0.72
TPM4-211ENST00000589897 DUOX1Q9NRD9 1551 aa10.53□□□□□ -0.72
TPM4-211ENST00000589897 YDJCA8MPS7 323 aa10.53□□□□□ -0.72
TPM4-211ENST00000589897 F6X3S4 739 aa10.53□□□□□ -0.72
TPM4-211ENST00000589897 RPS12P25398 132 aaKnown RBP10.53□□□□□ -0.72
TPM4-211ENST00000589897 SLC4A10Q6U841 1118 aa10.53□□□□□ -0.72
TPM4-211ENST00000589897 SLC17A8Q8NDX2 589 aa10.53□□□□□ -0.72
TPM4-211ENST00000589897 BSDC1Q9NW68 430 aaPredicted RBP10.53□□□□□ -0.72
TPM4-211ENST00000589897 C9orf78Q9NZ63 289 aaPredicted RBP10.53□□□□□ -0.72
TPM4-211ENST00000589897 ZBTB12Q9Y330 459 aaPredicted RBP10.53□□□□□ -0.72
TPM4-211ENST00000589897 SPEF2Q9C093 1822 aa10.53□□□□□ -0.72
TPM4-211ENST00000589897 TNRC18O15417 2968 aaPredicted RBP10.53□□□□□ -0.72
TPM4-211ENST00000589897 ANKRD18BA2A2Z9 1011 aa10.52□□□□□ -0.73
TPM4-211ENST00000589897 E9PSI1 815 aa10.52□□□□□ -0.73
TPM4-211ENST00000589897 GPR25O00155 361 aa10.52□□□□□ -0.73
TPM4-211ENST00000589897 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
TPM4-211ENST00000589897 ITGA6P23229 1130 aa10.52□□□□□ -0.73
TPM4-211ENST00000589897 KCNJ4P48050 445 aa10.52□□□□□ -0.73
TPM4-211ENST00000589897 RBM26Q5T8P6 1007 aaKnown RBP10.52□□□□□ -0.73
TPM4-211ENST00000589897 ANKRD2Q9GZV1 360 aa10.52□□□□□ -0.73
TPM4-211ENST00000589897 MINPP1Q9UNW1 487 aa10.52□□□□□ -0.73
TPM4-211ENST00000589897 TRPM7Q96QT4 1865 aa10.52□□□□□ -0.73
TPM4-211ENST00000589897 COL4A1P02462 1669 aa10.51□□□□□ -0.73
TPM4-211ENST00000589897 FKTNO75072 461 aa10.51□□□□□ -0.73
TPM4-211ENST00000589897 CCT4P50991 539 aaKnown RBP10.51□□□□□ -0.73
TPM4-211ENST00000589897 IFIT5Q13325 482 aaKnown RBP10.51□□□□□ -0.73
TPM4-211ENST00000589897 TBC1D10BQ4KMP7 808 aaPredicted RBP10.51□□□□□ -0.73
TPM4-211ENST00000589897 TAF7LQ5H9L4 462 aa10.51□□□□□ -0.73
TPM4-211ENST00000589897 BEND3Q5T5X7 828 aa10.51□□□□□ -0.73
TPM4-211ENST00000589897 SAMD7Q7Z3H4 446 aa10.51□□□□□ -0.73
TPM4-211ENST00000589897 FBXW7Q969H0 707 aa10.51□□□□□ -0.73
TPM4-211ENST00000589897 PLA2G12BQ9BX93 195 aa10.51□□□□□ -0.73
TPM4-211ENST00000589897 KCNQ5Q9NR82 932 aa10.51□□□□□ -0.73
TPM4-211ENST00000589897 RTL9Q8NET4 1388 aa10.51□□□□□ -0.73
TPM4-211ENST00000589897 GRM8O00222 908 aa10.5□□□□□ -0.73
TPM4-211ENST00000589897 TM4SF4P48230 202 aa10.5□□□□□ -0.73
TPM4-211ENST00000589897 DLK2Q6UY11 383 aa10.5□□□□□ -0.73
TPM4-211ENST00000589897 PODNQ7Z5L7 613 aa10.5□□□□□ -0.73
TPM4-211ENST00000589897 SRCIN1Q9C0H9 1055 aa10.5□□□□□ -0.73
TPM4-211ENST00000589897 LEMD3Q9Y2U8 911 aa10.5□□□□□ -0.73
TPM4-211ENST00000589897 SHTN1A0MZ66 631 aa10.49□□□□□ -0.73
TPM4-211ENST00000589897 USP17L3A6NCW0 530 aa10.49□□□□□ -0.73
TPM4-211ENST00000589897 USP17L4A6NCW7 530 aa10.49□□□□□ -0.73
TPM4-211ENST00000589897 ALDH1L1O75891 902 aa10.49□□□□□ -0.73
TPM4-211ENST00000589897 CSF1RP07333 972 aa10.49□□□□□ -0.73
TPM4-211ENST00000589897 VIL1P09327 827 aaKnown RBP10.49□□□□□ -0.73
TPM4-211ENST00000589897 CCDC57Q2TAC2 916 aa10.49□□□□□ -0.73
TPM4-211ENST00000589897 RSBN1LQ6PCB5 846 aaPredicted RBP10.49□□□□□ -0.73
TPM4-211ENST00000589897 USP17L1Q7RTZ2 530 aa10.49□□□□□ -0.73
TPM4-211ENST00000589897 RASAL3Q86YV0 1011 aa10.49□□□□□ -0.73
TPM4-211ENST00000589897 AGBL3Q8NEM8 1001 aa10.49□□□□□ -0.73
TPM4-211ENST00000589897 COLQQ9Y215 455 aaPredicted RBP10.49□□□□□ -0.73
TPM4-211ENST00000589897 ADM5C9JUS6 153 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 CCER2I3L3R5 266 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 CASP7P55210 303 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 SREBF2Q12772 1141 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 KIF4BQ2VIQ3 1234 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 LMBR1LQ6UX01 489 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 OGFOD1Q8N543 542 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 CFHR5Q9BXR6 569 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 COA1Q9GZY4 146 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 CNNM1Q9NRU3 951 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 ZNF804BA4D1E1 1349 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 ZNF521Q96K83 1311 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 MED23Q9ULK4 1368 aa10.48□□□□□ -0.73
TPM4-211ENST00000589897 SCN9AQ15858 1988 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 POTEFA5A3E0 1075 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 PLIN1O60240 522 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 ALDH1A1P00352 501 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 USP17L8P0C7I0 530 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 FOXO4P98177 505 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 CHRNDQ07001 517 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 SLFN5Q08AF3 891 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 LDHAL6AQ6ZMR3 332 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 MRPL50Q8N5N7 158 aaKnown RBP10.47□□□□□ -0.73
TPM4-211ENST00000589897 TMEM106CQ9BVX2 250 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 PTPRCP08575 1304 aa10.47□□□□□ -0.73
TPM4-211ENST00000589897 POLR2AP24928 1970 aaKnown RBP10.46□□□□□ -0.73
TPM4-211ENST00000589897 HELBQ8NG08 1087 aaPredicted RBP10.46□□□□□ -0.73
TPM4-211ENST00000589897 CDCA5Q96FF9 252 aa10.46□□□□□ -0.73
TPM4-211ENST00000589897 SMC4Q9NTJ3 1288 aa10.46□□□□□ -0.73
TPM4-211ENST00000589897 TRIM17Q9Y577 477 aa10.46□□□□□ -0.73
TPM4-211ENST00000589897 PSME4Q14997 1843 aa10.45□□□□□ -0.74
TPM4-211ENST00000589897 MYO3BQ8WXR4 1341 aa10.45□□□□□ -0.74
TPM4-211ENST00000589897 WTIPA6NIX2 430 aaPredicted RBP10.45□□□□□ -0.74
TPM4-211ENST00000589897 TAF5LO75529 589 aa10.45□□□□□ -0.74
TPM4-211ENST00000589897 INHBEP58166 350 aa10.45□□□□□ -0.74
TPM4-211ENST00000589897 SCARF1Q14162 830 aa10.45□□□□□ -0.74
TPM4-211ENST00000589897 ALDH1L2Q3SY69 923 aa10.45□□□□□ -0.74
TPM4-211ENST00000589897 STRIP1Q5VSL9 837 aa10.45□□□□□ -0.74
TPM4-211ENST00000589897 TTLL5Q6EMB2 1281 aa10.45□□□□□ -0.74
TPM4-211ENST00000589897 ZNF804AQ7Z570 1209 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms